Table of contents

Summary

GAF summary

Found 120067 annotations in 120089 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there are 8 violations with type Error.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 180 violations with type Warning.

For rule GO_AR:0000017 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000017) IDA annotations must not have a With/From entry, there are 4 violations with type Warning.

For rule GO_AR:0000018 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000018) IPI annotations require a With/From entry, there is one violation with type Warning.

GAF Prediction Summary

Found 1439 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-07-17/extensions/go-gaf.owl

Report

Group: wb - Dataset: wb

SUMMARY

This report generated on 2019-07-18

Header From Original Association File

!gaf-version: 2.0
!Project_name: WormBase
!Contact Email: help@wormbase.org

Contents

gorule-0000008

gorule-0000011

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000033

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND annotations to root nodes only; and only root nodes can have the evidence code ND.

Messages

gorule-0000017

IDA annotations must not have a With/From entry

Messages

gorule-0000018

IPI annotations require a With/From entry

Messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000033

Public Reference IDs (PMID, PMC, doi, or GO_REF) should be preferred over group specific Reference IDs

Messages