Table of contents

Summary

GAF summary

Found 246408 annotations in 246427 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000001 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000001) Basic GAF checks, there are 5 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 78 violations with type Warning.

For rule GO_AR:0000006 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000006) IEP usage is restricted to terms from the Biological Process ontology, there are 4 violations with type Warning.

For rule GO_AR:0000007 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000007) IPI should not be used with catalytic activity molecular function terms, there is one violation with type Warning.

GAF Prediction Summary

Found 3294 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

Group: tair - Dataset: tair

SUMMARY

This report generated on 2018-10-19

Contents

gorule-0000008

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000026

gorule-0000027

gorule-0000029

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000017

IDA annotations must not have a With/From entry

Messages

gorule-0000018

IPI annotations require a With/From entry

Messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000026

Annotations with IBA evidence code are filtered out if not coming from PAINT

Messages