GO:0005634 nucleus AnnotationPropagation C GO:0071037 nuclear polyadenylation-dependent snRNA catabolic process IBA GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005634 nucleus AnnotationPropagation C GO:0071038 nuclear polyadenylation-dependent tRNA catabolic process IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IMP GO:0015825 L-serine transport AnnotationPropagation P GO:0015194 L-serine transmembrane transporter activity IBA GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015194 L-serine transmembrane transporter activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IDA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IBA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA GO:0006897 endocytosis AnnotationPropagation P GO:0097020 COPII receptor activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium activated cation channel activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0000064 L-ornithine transmembrane transporter activity IBA GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium activated cation channel activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transporter activity IBA GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0015215 nucleotide transmembrane transporter activity IBA GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IDA GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA GO:1903712 cysteine transmembrane transport AnnotationPropagation P GO:0033229 cysteine transmembrane transporter activity IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0072354 histone H3T3 kinase activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA GO:0005634 nucleus AnnotationPropagation C GO:0033260 nuclear DNA replication IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity IDA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IDA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0090615 mitochondrial mRNA processing IBA GO:0030488 tRNA methylation AnnotationPropagation P GO:0016423 tRNA (guanine) methyltransferase activity IBA GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015662 P-type ion transporter activity IMP GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA GO:0000165 MAPK cascade AnnotationPropagation P GO:0004707 MAP kinase activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0008469 histone arginine N-methyltransferase activity IBA GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IDA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0015918 sterol transport AnnotationPropagation P GO:0015248 sterol transporter activity IBA GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA GO:0015867 ATP transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IMP GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IDA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0000064 L-ornithine transmembrane transporter activity IBA GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0005773 vacuole AnnotationPropagation C GO:0007036 vacuolar calcium ion homeostasis IDA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0031167 rRNA methylation AnnotationPropagation P GO:0016435 rRNA (guanine) methyltransferase activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IDA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IDA GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA GO:0106005 RNA 5'-cap (guanine-N7)-methylation AnnotationPropagation P GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity IBA GO:0080009 mRNA methylation AnnotationPropagation P GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity IBA GO:0006370 7-methylguanosine mRNA capping AnnotationPropagation P GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity IBA GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA GO:0030488 tRNA methylation AnnotationPropagation P GO:0052735 tRNA (cytosine-3-)-methyltransferase activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IDA GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0033862 UMP kinase activity IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IBA GO:0015768 maltose transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IGI GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IGI GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IDA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0090615 mitochondrial mRNA processing IMP GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0070159 mitochondrial threonyl-tRNA aminoacylation IBA GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA GO:1903424 fluoride transmembrane transport AnnotationPropagation P GO:1903425 fluoride transmembrane transporter activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IDA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IDA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0045117 azole transmembrane transport AnnotationPropagation P GO:0015244 fluconazole transmembrane transporter activity IBA GO:0015903 fluconazole transport AnnotationPropagation P GO:0015244 fluconazole transmembrane transporter activity IBA GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0015217 ADP transmembrane transporter activity IBA GO:0015866 ADP transport AnnotationPropagation P GO:0015217 ADP transmembrane transporter activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IMP GO:0006633 fatty acid biosynthetic process AnnotationPropagation P GO:0000036 acyl carrier activity IBA GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transporter activity IDA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity IDA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA GO:0035349 coenzyme A transmembrane transport AnnotationPropagation P GO:0015228 coenzyme A transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription IDA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IDA GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:1901962 S-adenosyl-L-methionine transmembrane transport AnnotationPropagation P GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IBA GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0000023 maltose metabolic process AnnotationPropagation P GO:0032450 maltose alpha-glucosidase activity IBA GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IDA GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA GO:0015918 sterol transport AnnotationPropagation P GO:0015248 sterol transporter activity IBA GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IDA GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0000964 mitochondrial RNA 5'-end processing IBA GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA GO:0030488 tRNA methylation AnnotationPropagation P GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0000006 high-affinity zinc transmembrane transporter activity IBA GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0032542 sulfiredoxin activity IBA GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0070126 mitochondrial translational termination IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140069 histone butyryltransferase activity IDA GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IDA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015271 outward rectifier potassium channel activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IDA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IDA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004362 glutathione-disulfide reductase (NADP) activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0030488 tRNA methylation AnnotationPropagation P GO:0008175 tRNA methyltransferase activity IBA GO:0000023 maltose metabolic process AnnotationPropagation P GO:0032450 maltose alpha-glucosidase activity ISS GO:0022904 respiratory electron transport chain AnnotationPropagation P GO:0004174 electron-transferring-flavoprotein dehydrogenase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0006264 mitochondrial DNA replication IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0140107 high-affinity potassium ion transmembrane transporter activity IBA GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IMP GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA GO:1990569 UDP-N-acetylglucosamine transmembrane transport AnnotationPropagation P GO:0005462 UDP-N-acetylglucosamine transmembrane transporter activity IBA GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA GO:0005794 Golgi apparatus AnnotationPropagation C GO:0032468 Golgi calcium ion homeostasis IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0030488 tRNA methylation AnnotationPropagation P GO:0016300 tRNA (uracil) methyltransferase activity IBA GO:0009107 lipoate biosynthetic process AnnotationPropagation P GO:0016992 lipoate synthase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA GO:0006413 translational initiation AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IBA GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0006269 DNA replication, synthesis of RNA primer AnnotationPropagation P GO:0003896 DNA primase activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA GO:0006868 glutamine transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IBA GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IBA GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IBA GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA GO:0017121 plasma membrane phospholipid scrambling AnnotationPropagation P GO:0017128 phospholipid scramblase activity IBA GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium transmembrane transporter activity IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0045145 single-stranded DNA 5'-3' DNA exonuclease activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA GO:0008645 hexose transmembrane transport AnnotationPropagation P GO:0015149 hexose transmembrane transporter activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0140107 high-affinity potassium ion transmembrane transporter activity IBA GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IDA GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA GO:0061615 glycolytic process through fructose-6-phosphate AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0032527 protein exit from endoplasmic reticulum IBA GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0005739 mitochondrion AnnotationPropagation C GO:1990627 mitochondrial inner membrane fusion IMP GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA GO:0099116 tRNA 5'-end processing AnnotationPropagation P GO:0008193 tRNA guanylyltransferase activity IBA GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity IBA GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium transmembrane transporter activity IBA GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium activated cation channel activity IBA GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IBA GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IDA GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IDA GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA GO:0097359 UDP-glucosylation AnnotationPropagation P GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IBA GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA GO:0006995 cellular response to nitrogen starvation FoldBasedPredictor GO:1901524 regulation of mitophagy occurs_in GO:0005739 mitochondrion part_of GO:0006995 cellular response to nitrogen starvation IMP GO:0005739 mitochondrion FoldBasedPredictor GO:1901524 regulation of mitophagy occurs_in GO:0005739 mitochondrion part_of GO:0006995 cellular response to nitrogen starvation IMP GO:1901525 negative regulation of mitophagy FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA GO:0070262 peptidyl-serine dephosphorylation FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA GO:0005741 mitochondrial outer membrane FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA