WARNING - Invalid subject type: defaulting to 'gene_product' (sncRNA) -- PomBase SPNCRNA.530 sno530 enables GO:0030563 PMID:37403782 EXP F small nucleolar RNA sno530 sncRNA taxon:4896 20230710 PomBase has_input(PomBase:SPSNRNA.06),part_of(GO:0016180)

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

total: 0

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

total: 0

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

total: 0

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

total: 0

gorule-0000008

No annotations should be made to uninformative high level terms

total: 4

Messages

WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- PomBase SPAC27F1.02c cdc8 involved_in GO:1904530 PMID:17452625 IDA P tropomyosin fus4 protein taxon:4896 20170811 PomBase
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- PomBase SPAC27F1.02c cdc8 enables GO:0098772 PMID:12796476 IDA F tropomyosin fus4 protein taxon:4896 20200317 PomBase has_input(PomBase:SPAC1F5.04c)
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- PomBase SPAC637.12c mst1 enables GO:0034212 PMID:19915592 EXP F histone acetyltransferase, KAT5 family Mst1 kat5 protein taxon:4896 20240402 PomBase has_input(PomBase:SPBC11B10.10c)
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- PomBase SPBC1778.06c fim1 involved_in GO:1904530 PMID:20705466 IDA P fimbrin protein taxon:4896 20170630 PomBase has_input(PomBase:SPAC27F1.02c)

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

total: 0

gorule-0000013

Taxon-appropriate annotation check

total: 92

Messages

ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC1039.10 mmf2 involved_in GO:1901705 GO_REF:0000024 ISO SGD:S000001313 P mitochondrial matrix protein, YjgF family protein Mmf2, reactive intermediate imine deaminase A homolog SPAC922.01|hpm1 protein taxon:4896 20100608 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC16C9.02c mta1 involved_in GO:0019509 GO_REF:0000024 ISO SGD:S000004007 P S-methyl-5-thioadenosine phosphorylase Mta1 protein taxon:4896 20050415 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC16E8.04c aro7 involved_in GO:0009094 GO_REF:0000024 ISS UniProtKB:P32178 P chorismate mutase Aro7 protein taxon:4896 20050225 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC1783.01 SPAC1783.01 involved_in GO:0009086 GO_REF:0000024 ISS UniProtKB:Q9UBK8 P methionine synthase reductase protein taxon:4896 20100625 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17C9.02c lys7 involved_in GO:0009085 PMID:15546125 IDA P alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7 protein taxon:4896 20041206 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17C9.02c lys7 involved_in GO:0009085 PMID:12127488 IDA P alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7 protein taxon:4896 20140806 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17C9.02c lys7 involved_in GO:0019878 PMID:3142867 IMP P alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7 protein taxon:4896 20130924 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17G8.06c ilv3 involved_in GO:0009097 PMID:35325114 IMP P dihydroxy-acid dehydratase Ilv3 protein taxon:4896 20220630 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17G8.06c ilv3 involved_in GO:1901705 GO_REF:0000024 ISS UniProtKB:P39522 P dihydroxy-acid dehydratase Ilv3 protein taxon:4896 20040624 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17G8.06c ilv3 involved_in GO:0009098 PMID:35325114 IMP P dihydroxy-acid dehydratase Ilv3 protein taxon:4896 20220630 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC17G8.06c ilv3 involved_in GO:0009099 PMID:35325114 IMP P dihydroxy-acid dehydratase Ilv3 protein taxon:4896 20220630 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC1805.10 ccz1 part_of GO:0035658 GO_REF:0000024 ISO SGD:S000000335 C Mon1-Ccz1 GEF complex subunit Ccz1 protein taxon:4896 20240810 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC19A8.15 trp2 involved_in GO:0000162 GO_REF:0000024 ISO SGD:S000002994 P tryptophan synthase protein taxon:4896 20050609 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC19A8.15 trp2 enables GO:0004834 GO_REF:0000024 ISO SGD:S000002994 F tryptophan synthase protein taxon:4896 20050609 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC20H4.05c mde1 involved_in GO:0019509 GO_REF:0000024 ISO SGD:S000003785 P 5'-methylthioribulose-1-phosphate dehydratase, adducin Mde1 protein taxon:4896 20091004 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC227.18 lys3 involved_in GO:0019878 PMID:3142867 IMP P saccharopine dehydrogenase Lys3 SPAC2F7.01 protein taxon:4896 20050509 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC227.18 lys3 involved_in GO:0019878 PMID:17622533 IMP P saccharopine dehydrogenase Lys3 SPAC2F7.01 protein taxon:4896 20130920 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC25G10.05c his1 involved_in GO:0000105 PMID:7732725 IGI SGD:S000000857 P ATP phosphoribosyltransferase protein taxon:4896 20040929 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC27D7.08c mtl16 enables GO:0052907 GO_REF:0000024 ISO UniProtKB:P75782 F 23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16 protein taxon:4896 20161012 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC29E6.05c mxr1 involved_in GO:1990355 PMID:24118096 IMP P peptide-methionine (S)-S-oxide reductase MsrA MsrA|SPAC30.09c protein taxon:4896 20140402 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC31G5.04 lys12 involved_in GO:0009085 PMID:20537132 IMP P homoisocitrate dehydrogenase Lys12 protein taxon:4896 20211001 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC31G5.04 lys12 involved_in GO:0019878 PMID:17622533 IMP P homoisocitrate dehydrogenase Lys12 protein taxon:4896 20130920 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC343.16 lys2 involved_in GO:0009085 PMID:16491385 IMP P homoaconitate hydratase Lys2 protein taxon:4896 20120424 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC343.16 lys2 involved_in GO:0019878 PMID:3142867 IMP P homoaconitate hydratase Lys2 protein taxon:4896 20130924 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC343.16 lys2 involved_in GO:0019878 PMID:17622533 IMP P homoaconitate hydratase Lys2 protein taxon:4896 20130920 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC3F10.09 his6 involved_in GO:0000105 GO_REF:0000024 ISO SGD:S000001282 P 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6 protein taxon:4896 20050104 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC57A7.07c SPAC57A7.07c involved_in GO:0009086 GO_REF:0000002 IEA InterPro:IPR017226 P homocysteine methyltransferase protein taxon:4896 20241216 InterPro
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC644.08 utr4 involved_in GO:0019509 GO_REF:0000024 ISO SGD:S000000764 P methionine salvage haloacid dehalogenase-like hydrolase Utr4 protein taxon:4896 20081207 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC7D4.07c trx1 involved_in GO:1990355 PMID:24118096 IMP P cytosolic thioredoxin Trx1 protein taxon:4896 20140402 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC9.06c mta3 involved_in GO:0019509 GO_REF:0000024 ISO SGD:S000003785 P 5'-methylthioribulose-1-phosphate dehydratase, adducin Mta3 protein taxon:4896 20091004 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC9.09 met26 involved_in GO:0019280 PMID:16436428 IMP P homocysteine methyltransferase Met26 protein taxon:4896 20140619 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC9E9.03 leu2 involved_in GO:0009098 PMID:17248775 EXP P 3-isopropylmalate dehydratase Leu2 protein taxon:4896 20161220 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAC9E9.06c SPAC9E9.06c involved_in GO:0009088 GO_REF:0000024 ISS UniProtKB:P16120 P threonine synthase protein taxon:4896 20030610 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAP7G5.04c lys1 involved_in GO:0009085 PMID:15546125 IDA P aminoadipate-semialdehyde dehydrogenase protein taxon:4896 20041206 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAP7G5.04c lys1 involved_in GO:0009085 PMID:16491385 IMP P aminoadipate-semialdehyde dehydrogenase protein taxon:4896 20120424 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAP7G5.04c lys1 involved_in GO:0009085 PMID:8350245 IMP P aminoadipate-semialdehyde dehydrogenase protein taxon:4896 20140911 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAP7G5.04c lys1 involved_in GO:0019878 PMID:3142867 IMP P aminoadipate-semialdehyde dehydrogenase protein taxon:4896 20130924 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPAP7G5.04c lys1 involved_in GO:0019878 PMID:8590464 IMP P aminoadipate-semialdehyde dehydrogenase protein taxon:4896 20121004 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1105.02c lys4 involved_in GO:0009085 PMID:19776021 IDA P homocitrate synthase protein taxon:4896 20161031 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1105.02c lys4 involved_in GO:0019878 PMID:16299000 IMP P homocitrate synthase protein taxon:4896 20050429 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1105.02c lys4 involved_in GO:0019878 PMID:3142867 IMP P homocitrate synthase protein taxon:4896 20130924 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1105.02c lys4 involved_in GO:0019878 PMID:17622533 IMP P homocitrate synthase protein taxon:4896 20130920 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1105.02c lys4 involved_in GO:0019878 PMID:20089861 EXP P homocitrate synthase protein taxon:4896 20230705 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC11B10.02c his3 involved_in GO:0000105 PMID:16444015 IMP P histidinol-phosphate transaminase His3 protein taxon:4896 20130828 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC12C2.03c SPBC12C2.03c involved_in GO:0009086 GO_REF:0000024 ISS UniProtKB:Q9UBK8 P methionine synthase reductase protein taxon:4896 20100625 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC14C8.04 ilv6 involved_in GO:1901705 GO_REF:0000024 ISO SGD:S000000515 P acetolactate synthase regulatory subunit Ilv6 protein taxon:4896 20040712 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC14C8.04 ilv6 involved_in GO:0009098 GO_REF:0000024 ISO SGD:S000000515 P acetolactate synthase regulatory subunit Ilv6 protein taxon:4896 20040712 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC14C8.04 ilv6 involved_in GO:0009099 GO_REF:0000024 ISO SGD:S000000515 P acetolactate synthase regulatory subunit Ilv6 protein taxon:4896 20040712 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1539.09c trp1 involved_in GO:0000162 PMID:24186364 IMP P phosphoribosylanthranilate isomerase/indole-3-glycerol-phosphate synthase/unknown aminotransferase, multifunctional enzyme Trp1 protein taxon:4896 20140417 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1677.03c tda1 involved_in GO:1901705 PMID:4698209 IDA P threonine ammonia-lyase Tda1 protein taxon:4896 20130816 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC16G5.08 trp4 involved_in GO:0000162 PMID:17248775 EXP P phosphoribosylanthranilate transferase Trp4 protein taxon:4896 20161220 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1711.13 his2 involved_in GO:0000105 PMID:15704224 IMP P histidinol dehydrogenase His2 protein taxon:4896 20061109 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1711.13 his2 involved_in GO:0000105 PMID:17248775 EXP P histidinol dehydrogenase His2 protein taxon:4896 20161220 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC19F5.04 hom3 involved_in GO:0071266 GO_REF:0000024 ISS UniProtKB:P10869 P aspartate kinase Hom3 protein taxon:4896 20240902 UniProt
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC19F5.04 hom3 involved_in GO:0009088 GO_REF:0000024 ISS UniProtKB:P10869 P aspartate kinase Hom3 protein taxon:4896 20240902 UniProt
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC1A4.02c leu1 involved_in GO:0009098 PMID:3063400 IGI SGD:S000000523 P 3-isopropylmalate dehydrogenase Leu1 SPBC1E8.07c protein taxon:4896 20050809 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC216.04c mxr2 involved_in GO:1990355 PMID:24118096 TAS P peptide-methionine (R)-S-oxide reductase MsrB MsrB protein taxon:4896 20250112 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC21H7.07c his5 involved_in GO:0000105 PMID:8590485 TAS P imidazoleglycerol-phosphate dehydratase His5 protein taxon:4896 20050416 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC23E6.10c mri1 involved_in GO:0019509 GO_REF:0000024 ISO SGD:S000006322 P methylthioribose-1-phosphate isomerase Mri1 protein taxon:4896 20050415 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC29A3.02c his7 involved_in GO:0000105 PMID:8299169 IGI UniProtKB:P06989 P phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7 protein taxon:4896 20130412 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC2G2.04c mmf1 involved_in GO:1901705 GO_REF:0000024 ISO SGD:S000001313 P mitochondrial matrix protein, YjgF family protein Mmf1, reactive intermediate imine deaminase A homolog Mmf1 pmf1 protein taxon:4896 20170716 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC30D10.16 pha2 involved_in GO:0009094 PMID:17622533 IMP P phrenate dehydratase protein taxon:4896 20130920 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC3B8.03 lys9 involved_in GO:0009085 PMID:20537132 IMP P saccharopine dehydrogenase protein taxon:4896 20211001 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC3B8.03 lys9 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P saccharopine dehydrogenase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC3E7.16c leu3 involved_in GO:0009098 PMID:20657649 IGI UniProtKB:E2D2C5 P 2-isopropylmalate synthase Leu3 SPBC4F6.03c protein taxon:4896 20040823 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC3E7.16c leu3 involved_in GO:0009098 PMID:20657649 IMP P 2-isopropylmalate synthase Leu3 SPBC4F6.03c protein taxon:4896 20040823 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC418.01c his4 involved_in GO:0000105 GO_REF:0000024 ISO SGD:S000000452 P imidazoleglycerol-phosphate synthase His4 SPBC887.20c protein taxon:4896 20050126 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC428.02c eca39 involved_in GO:1901705 PMID:9483807 IGI UniProtKB:P38891 P branched chain amino acid aminotransferase Eca39 SPBC582.12c protein taxon:4896 20040507 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC428.02c eca39 involved_in GO:0009098 PMID:9483807 IGI UniProtKB:P38891 P branched chain amino acid aminotransferase Eca39 SPBC582.12c protein taxon:4896 20040507 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC428.02c eca39 involved_in GO:0009099 PMID:9483807 IGI UniProtKB:P38891 P branched chain amino acid aminotransferase Eca39 SPBC582.12c protein taxon:4896 20040507 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC428.11 met17 enables GO:0051009 GO_REF:0000116 IEA RHEA:27822 F homocysteine synthase Met17 cys2 protein taxon:4896 20241216 RHEA
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC4C3.03 thr1 involved_in GO:0009088 GO_REF:0000024 ISS UniProtKB:P17423 P homoserine kinase Thr1 protein taxon:4896 20030612 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC56F2.11 met6 involved_in GO:0071266 PMID:16216079 IDA P homoserine O-acetyltransferase Met6 protein taxon:4896 20191030 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC56F2.11 met6 involved_in GO:0071265 PMID:17622533 IMP P homoserine O-acetyltransferase Met6 protein taxon:4896 20070716 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC56F2.11 met6 involved_in GO:0009086 PMID:9829945 IMP P homoserine O-acetyltransferase Met6 protein taxon:4896 20130920 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC56F2.12 ilv5 involved_in GO:1901705 GO_REF:0000024 ISS UniProtKB:P06168 P acetohydroxyacid reductoisomerase protein taxon:4896 20040524 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC56F2.12 ilv5 involved_in GO:0009099 GO_REF:0000024 ISS UniProtKB:P06168 P acetohydroxyacid reductoisomerase protein taxon:4896 20040524 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC776.03 hom6 involved_in GO:0009086 GO_REF:0000024 ISS UniProtKB:P31116 P homoserine dehydrogenase Hom6 protein taxon:4896 20240320 UniProt
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC776.03 hom6 involved_in GO:0009088 GO_REF:0000024 ISS UniProtKB:P31116 P homoserine dehydrogenase Hom6 protein taxon:4896 20240320 UniProt
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBC887.01 adi1 involved_in GO:0019509 GO_REF:0000050 ISM InterPro:IPR004313 P acireductone dioxygenase family Adi1 protein taxon:4896 20081208 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP35G2.07 ilv1 involved_in GO:0009097 PMID:4698210 EXP P acetolactate synthase catalytic subunit protein taxon:4896 20130925 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP35G2.07 ilv1 involved_in GO:1901705 PMID:8299177 IGI UniProtKB:P07342 P acetolactate synthase catalytic subunit protein taxon:4896 20040712 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP35G2.07 ilv1 involved_in GO:0009098 PMID:8299177 IC GO:0003984 P acetolactate synthase catalytic subunit protein taxon:4896 20190114 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP35G2.07 ilv1 involved_in GO:0009099 PMID:4698210 EXP P acetolactate synthase catalytic subunit protein taxon:4896 20130925 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP35G2.07 ilv1 involved_in GO:0009099 PMID:4821071 IDA P acetolactate synthase catalytic subunit protein taxon:4896 20140422 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPBP4H10.15 aco2 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P mitochondrial ribosomal protein subunit L21/aconitate hydratase, fusion protein mrpl49 protein taxon:4896 20240129 UniProt
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC11E10.01 cbl1 involved_in GO:0071266 GO_REF:0000002 IEA InterPro:IPR006238 P cystathionine beta-lyase Cbl1 SPCC61.06 protein taxon:4896 20241216 InterPro
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC1223.03c gut2 part_of GO:0009331 GO_REF:0000024 ISO SGD:S000001417 C glycerol-3-phosphate dehydrogenase Gut2 protein taxon:4896 20040618 PomBase
WARNING - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC1442.09 trp3 involved_in GO:0000162 PMID:17248775 EXP P anthranilate synthase component I Trp3 protein taxon:4896 20161220 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC1672.01 SPCC1672.01 involved_in GO:0000105 GO_REF:0000024 ISO SGD:S000001921 P histidinol-phosphatase protein taxon:4896 20050416 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC1827.06c hom2 involved_in GO:0009086 GO_REF:0000024 ISS UniProtKB:P13663 P aspartate semialdehyde dehydrogenase Hom2 protein taxon:4896 20030609 PomBase
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- PomBase SPCC1827.06c hom2 involved_in GO:0009088 GO_REF:0000024 ISS UniProtKB:P13663 P aspartate semialdehyde dehydrogenase Hom2 protein taxon:4896 20030609 PomBase

gorule-0000015

Dual species taxon check

total: 0

gorule-0000016

With/From: IC annotations require a With/From GO ID

total: 1

Messages

WARNING - Violates GO Rule: GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column -- PomBase SPATRNATYR.01 SPATRNATYR.01 enables GO:0033410 GO_REF:0000111 IC GO:0033410 F tRNA Tyrosine tRNA taxon:4896 20150206 PomBase

gorule-0000017

IDA annotations must not have a With/From entry

total: 0

gorule-0000018

IPI annotations require a With/From entry

total: 5

Messages

WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- PomBase SPAC1565.08 cdc48 enables GO:0031625 PMID:22086920 IPI F AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48 SPAC6F12.01|dsc6 protein taxon:4896 20120712 PomBase
WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- PomBase SPAC6B12.10c spp1 part_of GO:0005658 PMID:14766746 IPI C DNA primase catalytic subunit Spp1 pri1 protein taxon:4896 20240827 ComplexPortal
WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- PomBase SPBC17D11.06 spp2 part_of GO:0005658 PMID:14766746 IPI C DNA primase large subunit Spp2 pri2 protein taxon:4896 20240827 ComplexPortal
WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- PomBase SPBC660.07 ntp1 part_of GO:0005946 PMID:12153582 IPI C alpha,alpha-trehalase Ntp1 protein taxon:4896 20240827 ComplexPortal
WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- PomBase SPCC553.09c spb70 part_of GO:0005658 PMID:14766746 IPI C DNA polymerase alpha B-subunit pol12 protein taxon:4896 20240827 ComplexPortal

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

total: 5

Messages

ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0036003) -- PomBase SPMTR.01 mat2-Pc is_active_in GO:0005634 GO_REF:0000036 IC GO:0003677,GO:0036003 C silenced P-specific transcription factor Pc mat-Pc|mat2Pc|matPc protein taxon:4896 20150121 PomBase
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- PomBase SPAC222.12c atp2 is_active_in GO:0099617 GO_REF:0000111 IC GO:0045269 C F1-FO ATP synthase beta subunit (central stalk) Atp2 protein taxon:4896 20240724 PomBase
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- PomBase SPBC13E7.04 atp16 is_active_in GO:0099617 GO_REF:0000111 IC GO:0045269 C F1-FO ATP synthase delta subunit (central stalk) Atp16 protein taxon:4896 20240724 PomBase
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- PomBase SPBC1734.13 atp3 is_active_in GO:0099617 GO_REF:0000111 IC GO:0045269 C F1-FO ATP synthase gamma subunit protein taxon:4896 20240724 PomBase
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0045269) -- PomBase SPBC31F10.15c atp15 is_active_in GO:0099617 GO_REF:0000111 IC GO:0045269 C F1-FO ATP synthase epsilon subunit (central stalk) Atp15 protein taxon:4896 20240724 PomBase

gorule-0000022

Check for, and filter, annotations made to retracted publications

total: 0

gorule-0000027

Each identifier in GAF is valid

total: 1

Messages

WARNING - Invalid identifier: GORULE:0000027: PBQ not found in list of database names in dbxrefs (PBQ:0000003) -- PomBase SPBC3B8.10c nem1 is_active_in GO:0005634 PMID:30116786 IDA C serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1 protein taxon:4896 20180828 PomBase existence_overlaps(PBQ:0000003)

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

total: 0

gorule-0000029

IEAs should be less than one year old.

total: 60

Messages

WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1002.11 gaa1 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P GPI-anchor transamidase complex subunit Gaa1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1002.17c urg2 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uracil phosphoribosyltransferase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC10F6.03c cts1 involved_in GO:0044210 GO_REF:0000041 IEA UniPathway:UPA00159 P CTP synthase Cts1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1399.04c uck2 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uracil phosphoribosyltransferase Uck2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1556.07 pmm1 involved_in GO:0009298 GO_REF:0000041 IEA UniPathway:UPA00126 P phosphomannomutase Pmm1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC15E1.04 hal3 involved_in GO:0006235 GO_REF:0000041 IEA UniPathway:UPA00575 P thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1 tds1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC16.03c ura2 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P dihydroorotase Ura2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1805.06c hem2 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P porphobilinogen synthase Hem2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC18G6.04c shm2 involved_in GO:0035999 GO_REF:0000041 IEA UniPathway:UPA00193 P serine hydroxymethyltransferase Shm2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1952.01 gab1 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P Pig-U, Gab1 SPAC1B3.19 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1B3.01c SPAC1B3.01c involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uracil phosphoribosyltransferase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1F12.09 gpi17 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-S protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC1F5.07c hem14 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P protoporphyrinogen oxidase Hem14 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC227.09 fol3 involved_in GO:0046901 GO_REF:0000041 IEA UniPathway:UPA00850 P folylpolyglutamate synthase Fol3 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC227.14 yfh7 involved_in GO:0044211 GO_REF:0000041 IEA UniPathway:UPA00579 P uridine kinase Yfh7 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC227.14 yfh7 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uridine kinase Yfh7 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC22G7.06c ura1 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC23H4.10c thi4 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P bifunctional thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC24B11.13 hem3 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P hydroxymethylbilane synthase Hem3 SPAC806.01 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC24C9.12c shm1 involved_in GO:0035999 GO_REF:0000041 IEA UniPathway:UPA00193 P serine hydroxymethyltransferase Shm1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC2E1P5.01c mns1 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P mannosyl-oligosaccharide 1,2-alpha-mannosidase SPAPB1E7.13c protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC2F3.09 hem1 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P 5-aminolevulinate synthase Hem1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC31G5.08 hem4 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P uroporphyrinogen-III synthase Ups ups|ups1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC31G5.16c dpm1 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC4G9.10 arg3 involved_in GO:0006526 GO_REF:0000041 IEA UniPathway:UPA00068 P ornithine carbamoyltransferase Arg3 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC56E4.04c cut6 involved_in GO:2001295 GO_REF:0000041 IEA UniPathway:UPA00655 P acetyl-CoA/biotin carboxylase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC7D4.15c ost4 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P oligosaccharyltransferase complex subunit, Ost4 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPAC9E9.11 plr1 involved_in GO:0042820 GO_REF:0000041 IEA UniPathway:UPA00192 P pyridoxal reductase Plr1 plr protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC106.04 ada1 involved_in GO:0032264 GO_REF:0000041 IEA UniPathway:UPA00591 P adenosine deaminase Ada1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC106.15 idi1 involved_in GO:0050992 GO_REF:0000041 IEA UniPathway:UPA00059 P isopentenyl-diphosphate delta-isomerase Idi1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC119.10 asn1 involved_in GO:0070981 GO_REF:0000041 IEA UniPathway:UPA00134 P asparagine synthetase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC1271.14 aga1 involved_in GO:0006526 GO_REF:0000041 IEA UniPathway:UPA00068 P acetyl-CoA:L-glutamate N-acetyltransferase arg7 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC12C2.11 gfa1 involved_in GO:0006048 GO_REF:0000041 IEA UniPathway:UPA00113 P glutamine-fructose-6-phosphate transaminase Gfa1 SPBC21D10.02 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC1604.15 gpi16 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-T, Gpi16 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC16G5.02c rbk1 involved_in GO:0019303 GO_REF:0000041 IEA UniPathway:UPA00916 P ribokinase Rbk1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC1711.04 mtd1 involved_in GO:0035999 GO_REF:0000041 IEA UniPathway:UPA00193 P methylenetetrahydrofolate reductase Mtd1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC19G7.02 abz2 involved_in GO:0046654 GO_REF:0000041 IEA UniPathway:UPA00077 P 4-amino-4-deoxychorismate lyase Abz2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC21C3.08c car2 involved_in GO:0055129 GO_REF:0000041 IEA UniPathway:UPA00098 P ornithine transaminase Car2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC365.14c uge1 involved_in GO:0006012 GO_REF:0000041 IEA UniPathway:UPA00214 P UDP-glucose 4-epimerase Uge1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC3B8.03 lys9 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P saccharopine dehydrogenase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC460.04c SPBC460.04c involved_in GO:0046306 GO_REF:0000041 IEA UniPathway:UPA00338 P sulfonate/alpha-ketoglutarate dioxygenase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC582.08 alt1 involved_in GO:0042853 GO_REF:0000041 IEA UniPathway:UPA00528 P alanine aminotransferase Alt1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBC725.15 ura5 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P orotate phosphoribosyltransferase Ura5 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBP4H10.15 aco2 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P mitochondrial ribosomal protein subunit L21/aconitate hydratase, fusion protein mrpl49 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBP8B7.17c thi20 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P phosphomethylpyrimidine kinase Thi20 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBP8B7.18c thi201 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P phosphomethylpyrimidine kinase Thi201 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPBP8B7.29 abz1 involved_in GO:0046654 GO_REF:0000041 IEA UniPathway:UPA00077 P para-aminobenzoate synthase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC11E10.05c ynd1 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P nucleoside diphosphatase Ynd1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC1223.02 nmt1 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase Nmt1 thi3 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC1223.03c gut2 involved_in GO:0019563 GO_REF:0000041 IEA UniPathway:UPA00618 P glycerol-3-phosphate dehydrogenase Gut2 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC162.11c urk1 involved_in GO:0044211 GO_REF:0000041 IEA UniPathway:UPA00579 P uridine kinase/uracil phosphoribosyltransferase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC162.11c urk1 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uridine kinase/uracil phosphoribosyltransferase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC1672.03c gud1 involved_in GO:0006147 GO_REF:0000041 IEA UniPathway:UPA00603 P guanine deaminase Gud1 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC18.19c ost5 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P oligosaccharyltransferase complex zeta subunit, Ost5 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC18B5.05c SPCC18B5.05c involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P phosphomethylpyrimidine kinase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC338.14 ado1 involved_in GO:0044209 GO_REF:0000041 IEA UniPathway:UPA00588 P adenosine kinase protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC4B3.05c hem12 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P uroporphyrinogen decarboxylase Hem12 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC550.10 atd3 involved_in GO:0019285 GO_REF:0000041 IEA UniPathway:UPA00529 P betaine-aldehyde dehydrogenase Atd3 meu8 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC63.10c sec59 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P dolichol kinase Sec59 protein taxon:4896 20240129 UniProt
WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- PomBase SPCC965.14c fcy1 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P cytosine deaminase Fcy1 protein taxon:4896 20240129 UniProt

gorule-0000030

Obsolete GO_REFs are not allowed

total: 0

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

total: 0

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

total: 0

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

total: 0

gorule-0000043

Check for valid combination of evidence code and GO_REF

total: 0

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

total: 0

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

total: 0

gorule-0000055

References should have only one ID per ID space

total: 0

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

total: 0

gorule-0000061

Allowed gene product to term relations (gp2term)

total: 0

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

total: 1

Messages

WARNING - Violates GO Rule: GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column) -- PomBase SPBC115.02c afg1 involved_in GO:0141164 GO_REF:0000024 ISO P AFG1 family mitochondrial ATPase/chaperone Afg1 protein taxon:4896 20241103 PomBase

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

total: 0

gorule-0000065

Annotations to term that are candidates for obsoletion should be removed

total: 0

other

total: 0

GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033459 GAA codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006412 translation AnnotationPropagation P GO:0033463 GGA codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISS
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033452 GUG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISO
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033446 AGC codon-amino acid adaptor activity ISM
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033410 UAC codon-amino acid adaptor activity IC
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042799 histone H4K20 methyltransferase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033443 AAA codon-amino acid adaptor activity ISM
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033404 UUG codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0007165 signal transduction AnnotationPropagation P GO:0000772 mating pheromone activity IMP
GO:0006412 translation AnnotationPropagation P GO:0033449 GUU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity ISO
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity ISO
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0052699 ergothioneine biosynthetic process AnnotationPropagation P GO:1990411 hercynylcysteine sulfoxide lyase activity (ergothioneine-forming) IMP
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IMP
GO:0045727 positive regulation of translation AnnotationPropagation P GO:0008494 translation activator activity EXP
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISM
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0015218 pyrimidine nucleotide transmembrane transporter activity IBA
GO:0006864 pyrimidine nucleotide transport AnnotationPropagation P GO:0015218 pyrimidine nucleotide transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033455 GCA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033447 AGA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0034337 RNA folding AnnotationPropagation P GO:0140691 RNA folding chaperone ISO
GO:0016020 membrane AnnotationPropagation C GO:0006676 mannosyl diphosphorylinositol ceramide metabolic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033423 CCA codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0006412 translation AnnotationPropagation P GO:0033431 CGA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033428 CAG codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IDA
GO:0000316 sulfite transmembrane transport AnnotationPropagation P GO:0000319 sulfite transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0140488 heme receptor activity IDA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032454 histone H3K9 demethylase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033432 CGG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033439 ACA codon-amino acid adaptor activity ISM
GO:0045727 positive regulation of translation AnnotationPropagation P GO:0008494 translation activator activity EXP
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033416 UGG codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033417 CUU codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033446 AGC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone ISM
GO:0000165 MAPK cascade AnnotationPropagation P GO:0005078 MAP-kinase scaffold activity ISO
GO:0006412 translation AnnotationPropagation P GO:0033464 GGG codon-amino acid adaptor activity ISM
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity EXP
GO:0016020 membrane AnnotationPropagation C GO:0006672 ceramide metabolic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006391 transcription initiation at mitochondrial promoter IBA
GO:0006412 translation AnnotationPropagation P GO:0033403 UUA codon-amino acid adaptor activity ISM
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033435 AUA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033451 GUA codon-amino acid adaptor activity ISM
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IDA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033408 UCG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033414 UGC codon-amino acid adaptor activity ISM
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IMP
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033414 UGC codon-amino acid adaptor activity ISM
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0015860 purine nucleoside transmembrane transport AnnotationPropagation P GO:0015211 purine nucleoside transmembrane transporter activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity EXP
GO:0006278 RNA-templated DNA biosynthetic process AnnotationPropagation P GO:0003720 telomerase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033410 UAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033434 AUC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0006412 translation AnnotationPropagation P GO:0033419 CUA codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0006412 translation AnnotationPropagation P GO:0033455 GCA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033420 CUG codon-amino acid adaptor activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0071918 urea transmembrane transport AnnotationPropagation P GO:0015204 urea transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042054 histone methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033449 GUU codon-amino acid adaptor activity ISM
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0044750 high-affinity nickel cation transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033459 GAA codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IPI
GO:1903424 fluoride transmembrane transport AnnotationPropagation P GO:1903425 fluoride transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0005471 ATP:ADP antiporter activity IGI
GO:0015867 ATP transport AnnotationPropagation P GO:0005471 ATP:ADP antiporter activity IGI
GO:0015866 ADP transport AnnotationPropagation P GO:0005471 ATP:ADP antiporter activity IGI
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0007165 signal transduction AnnotationPropagation P GO:0000772 mating pheromone activity IMP
GO:0007165 signal transduction AnnotationPropagation P GO:0000772 mating pheromone activity IMP
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone ISO
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032452 histone demethylase activity IBA
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033410 UAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IMP
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IMP
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006412 translation AnnotationPropagation P GO:0033407 UCA codon-amino acid adaptor activity ISM
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033407 UCA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0089722 phosphoenolpyruvate transmembrane transport AnnotationPropagation P GO:0089721 phosphoenolpyruvate transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0097250 mitochondrial respirasome assembly IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033407 UCA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity TAS
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity EXP
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033443 AAA codon-amino acid adaptor activity ISM
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005388 P-type calcium transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity EXP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033447 AGA codon-amino acid adaptor activity ISM
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046521 sphingoid catabolic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033443 AAA codon-amino acid adaptor activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IMP
GO:0006412 translation AnnotationPropagation P GO:0033424 CCG codon-amino acid adaptor activity ISM
GO:0001522 pseudouridine synthesis AnnotationPropagation P GO:0004730 pseudouridylate synthase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006325 chromatin organization AnnotationPropagation P GO:0140463 chromatin-protein adaptor activity EXP
GO:0006412 translation AnnotationPropagation P GO:0033417 CUU codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033403 UUA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IMP
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone NAS
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0140053 mitochondrial gene expression IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0006412 translation AnnotationPropagation P GO:0033417 CUU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0001172 RNA-templated transcription AnnotationPropagation P GO:0003968 RNA-dependent RNA polymerase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033428 CAG codon-amino acid adaptor activity ISM
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033417 CUU codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0000965 mitochondrial RNA 3'-end processing IBA
GO:0006412 translation AnnotationPropagation P GO:0033410 UAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033448 AGG codon-amino acid adaptor activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0006360 transcription by RNA polymerase I AnnotationPropagation P GO:0001181 RNA polymerase I general transcription initiation factor activity NAS
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IC
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033449 GUU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0006488 dolichol-linked oligosaccharide biosynthetic process AnnotationPropagation P GO:0042281 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033416 UGG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033447 AGA codon-amino acid adaptor activity ISM
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033455 GCA codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033423 CCA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033414 UGC codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033456 GCG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033440 ACG codon-amino acid adaptor activity ISM
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISS
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISS
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity EXP
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISO
GO:0006412 translation AnnotationPropagation P GO:0033402 UUC codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033459 GAA codon-amino acid adaptor activity ISM
GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IMP
GO:0006360 transcription by RNA polymerase I AnnotationPropagation P GO:0001181 RNA polymerase I general transcription initiation factor activity IC
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA
GO:0006412 translation AnnotationPropagation P GO:0033446 AGC codon-amino acid adaptor activity ISM
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033426 CAC codon-amino acid adaptor activity ISM
GO:0022904 respiratory electron transport chain AnnotationPropagation P GO:0004174 electron-transferring-flavoprotein dehydrogenase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071038 TRAMP-dependent tRNA surveillance pathway IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033426 CAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033434 AUC codon-amino acid adaptor activity ISM
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IMP
GO:0006412 translation AnnotationPropagation P GO:0033410 UAC codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity ISS
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity ISS
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0006338 chromatin remodeling AnnotationPropagation P GO:1990259 histone H2AQ104 methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070183 mitochondrial tryptophanyl-tRNA aminoacylation IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033463 GGA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003747 translation release factor activity ISS
GO:0006415 translational termination AnnotationPropagation P GO:0003747 translation release factor activity ISS
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033437 ACU codon-amino acid adaptor activity ISM
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004707 MAP kinase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033426 CAC codon-amino acid adaptor activity ISM
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033451 GUA codon-amino acid adaptor activity ISM
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033421 CCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033461 GGU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033451 GUA codon-amino acid adaptor activity ISM
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033404 UUG codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IDA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IDA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity ISM
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070158 mitochondrial seryl-tRNA aminoacylation IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033403 UUA codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033417 CUU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone EXP
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004747 ribokinase activity ISO
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033439 ACA codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISO
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0033423 CCA codon-amino acid adaptor activity ISM
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004856 D-xylulokinase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033458 GAC codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0015876 acetyl-CoA transport AnnotationPropagation P GO:0008521 acetyl-CoA transmembrane transporter activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008521 acetyl-CoA transmembrane transporter activity ISS
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone NAS
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0140107 high-affinity potassium ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity TAS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0030970 retrograde protein transport, ER to cytosol IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033436 AUG codon-amino acid adaptor activity ISM
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity ISO
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0005381 iron ion transmembrane transporter activity ISO
GO:0000316 sulfite transmembrane transport AnnotationPropagation P GO:0000319 sulfite transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone NAS
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033426 CAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033414 UGC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033429 CGU codon-amino acid adaptor activity ISM
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033405 UCU codon-amino acid adaptor activity ISM
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033444 AAG codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033449 GUU codon-amino acid adaptor activity ISM
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006412 translation AnnotationPropagation P GO:0033416 UGG codon-amino acid adaptor activity ISM
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033459 GAA codon-amino acid adaptor activity ISM
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IDA
GO:0006412 translation AnnotationPropagation P GO:0033449 GUU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033427 CAA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity TAS
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity TAS
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity ISM
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0005381 iron ion transmembrane transporter activity ISS
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0106004 tRNA (guanine-N7)-methylation AnnotationPropagation P GO:0008176 tRNA (guanine(46)-N7)-methyltransferase activity IBA
GO:0007155 cell adhesion AnnotationPropagation P GO:0098631 cell adhesion mediator activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033460 GAG codon-amino acid adaptor activity ISM
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity ISO
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033416 UGG codon-amino acid adaptor activity ISM
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0008469 histone arginine N-methyltransferase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone NAS
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0006412 translation AnnotationPropagation P GO:0033426 CAC codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity ISO
GO:0006412 translation AnnotationPropagation P GO:0033453 GCU codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033419 CUA codon-amino acid adaptor activity ISM
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033431 CGA codon-amino acid adaptor activity ISM
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0006412 translation AnnotationPropagation P GO:0033462 GGC codon-amino acid adaptor activity ISM
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033439 ACA codon-amino acid adaptor activity ISM
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0045117 azole transmembrane transport AnnotationPropagation P GO:0015244 fluconazole transmembrane transporter activity IBA
GO:0015903 fluconazole transport AnnotationPropagation P GO:0015244 fluconazole transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033442 AAC codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033459 GAA codon-amino acid adaptor activity ISM
GO:0006412 translation AnnotationPropagation P GO:0033443 AAA codon-amino acid adaptor activity ISM
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033433 AUU codon-amino acid adaptor activity ISM
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033446 AGC codon-amino acid adaptor activity ISM
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0015770 sucrose transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070901 mitochondrial tRNA methylation IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity TAS
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0033461 GGU codon-amino acid adaptor activity ISM
GO:0031120 snRNA pseudouridine synthesis FoldBasedPredictor GO:0030566 snRNA modification guide activity part_of GO:0031120 snRNA pseudouridine synthesis IMP
GO:0140480 mitotic spindle pole body insertion into the nuclear envelope FoldBasedPredictor GO:0106166 spindle pole body-nuclear membrane anchor activity part_of GO:0140480 mitotic spindle pole body insertion into the nuclear envelope EXP
GO:0007004 telomere maintenance via telomerase FoldBasedPredictor GO:0140691 RNA folding chaperone has_input PomBase:SPNCRNA.214 part_of GO:0007004 telomere maintenance via telomerase ISO
GO:0007131 reciprocal meiotic recombination FoldBasedPredictor GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity part_of GO:0007131 reciprocal meiotic recombination ISO
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen FoldBasedPredictor GO:0004129 cytochrome-c oxidase activity part_of GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IDA
GO:0005737 cytoplasm FoldBasedPredictor GO:0140311 protein sequestering activity has_input PomBase:SPBC146.13c occurs_in GO:0005737 cytoplasm EXP
GO:0050982 detection of mechanical stimulus FoldBasedPredictor GO:0140897 mechanoreceptor activity part_of GO:0050982 detection of mechanical stimulus EXP
GO:0062111 zinc ion import into organelle FoldBasedPredictor GO:0005385 zinc ion transmembrane transporter activity part_of GO:0006882 intracellular zinc ion homeostasis part_of GO:0062111 zinc ion import into organelle EXP
GO:0006882 intracellular zinc ion homeostasis FoldBasedPredictor GO:0005385 zinc ion transmembrane transporter activity part_of GO:0006882 intracellular zinc ion homeostasis part_of GO:0062111 zinc ion import into organelle EXP
GO:0000122 negative regulation of transcription by RNA polymerase II FoldBasedPredictor GO:0003714 transcription corepressor activity happens_during GO:0000087 mitotic M phase has_input PomBase:SPBC336.12c part_of GO:0000122 negative regulation of transcription by RNA polymerase II EXP
GO:0005637 nuclear inner membrane FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPBC1778.02 occurs_in GO:0005637 nuclear inner membrane part_of GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body IPI
GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPBC1778.02 occurs_in GO:0005637 nuclear inner membrane part_of GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body IPI
GO:1990813 meiotic centromeric cohesion protection in anaphase I FoldBasedPredictor GO:0005515 protein binding part_of GO:1990813 meiotic centromeric cohesion protection in anaphase I IPI
GO:0071998 ascospore release from ascus FoldBasedPredictor GO:0051118 glucan endo-1,3-alpha-glucosidase activity part_of GO:0071998 ascospore release from ascus IDA
GO:0005634 nucleus FoldBasedPredictor GO:0003714 transcription corepressor activity happens_during GO:0010106 cellular response to iron ion starvation has_input PomBase:SPAC23C11.08 has_input PomBase:SPBC3B8.02 has_input PomBase:SPBC725.11c occurs_in GO:0005634 nucleus part_of GO:0000122 negative regulation of transcription by RNA polymerase II IMP
GO:0000122 negative regulation of transcription by RNA polymerase II FoldBasedPredictor GO:0003714 transcription corepressor activity happens_during GO:0010106 cellular response to iron ion starvation has_input PomBase:SPAC23C11.08 has_input PomBase:SPBC3B8.02 has_input PomBase:SPBC725.11c occurs_in GO:0005634 nucleus part_of GO:0000122 negative regulation of transcription by RNA polymerase II IMP
GO:0002182 cytoplasmic translational elongation FoldBasedPredictor GO:0003746 translation elongation factor activity part_of GO:0002182 cytoplasmic translational elongation ISO
GO:0016180 snRNA processing FoldBasedPredictor GO:0030563 snRNA 2'-O-ribose methylation guide activity has_input PomBase:SPSNRNA.06 part_of GO:0016180 snRNA processing EXP
GO:0031097 medial cortex FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPBC19G7.05c occurs_in GO:0031097 medial cortex IMP
GO:0033617 mitochondrial cytochrome c oxidase assembly FoldBasedPredictor GO:0016531 copper chaperone activity has_input PomBase:SPMIT.11 part_of GO:0033617 mitochondrial cytochrome c oxidase assembly ISS
GO:0016236 macroautophagy FoldBasedPredictor GO:0180020 membrane bending activity part_of GO:0016236 macroautophagy IDA
GO:0000073 initial mitotic spindle pole body separation FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity happens_during GO:0000088 mitotic prophase has_input PomBase:SPAC890.02c occurs_in GO:0044732 mitotic spindle pole body part_of GO:0000073 initial mitotic spindle pole body separation IMP
GO:0044732 mitotic spindle pole body FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity happens_during GO:0000088 mitotic prophase has_input PomBase:SPAC890.02c occurs_in GO:0044732 mitotic spindle pole body part_of GO:0000073 initial mitotic spindle pole body separation IMP
GO:0031030 negative regulation of septation initiation signaling FoldBasedPredictor GO:0140475 spindle pole body anchor activity has_input PomBase:SPAC2C4.10c has_input PomBase:SPBC1773.01 has_input PomBase:SPBC27B12.04c part_of GO:0031030 negative regulation of septation initiation signaling EXP
GO:0000423 mitophagy FoldBasedPredictor GO:0005515 protein binding part_of GO:0000423 mitophagy IPI
GO:0016562 protein import into peroxisome matrix, receptor recycling FoldBasedPredictor GO:0097027 ubiquitin-protein transferase activator activity has_input PomBase:SPBC1198.09 part_of GO:0016562 protein import into peroxisome matrix, receptor recycling ISO
GO:0006511 ubiquitin-dependent protein catabolic process FoldBasedPredictor GO:1990756 ubiquitin-like ligase-substrate adaptor activity has_input PomBase:SPCC290.04 part_of GO:0006511 ubiquitin-dependent protein catabolic process IPI
GO:0060261 positive regulation of transcription initiation by RNA polymerase II FoldBasedPredictor GO:0003713 transcription coactivator activity has_input PomBase:SPBC19F8.07 part_of GO:0060261 positive regulation of transcription initiation by RNA polymerase II IDA
GO:0005886 plasma membrane FoldBasedPredictor GO:0005546 phosphatidylinositol-4,5-bisphosphate binding occurs_in GO:0005886 plasma membrane part_of GO:0090522 vesicle tethering involved in exocytosis TAS
GO:0090522 vesicle tethering involved in exocytosis FoldBasedPredictor GO:0005546 phosphatidylinositol-4,5-bisphosphate binding occurs_in GO:0005886 plasma membrane part_of GO:0090522 vesicle tethering involved in exocytosis TAS
GO:0051728 cell cycle switching, mitotic to meiotic cell cycle FoldBasedPredictor GO:0030291 protein serine/threonine kinase inhibitor activity has_input PomBase:SPBC19C2.05 part_of GO:0051728 cell cycle switching, mitotic to meiotic cell cycle IDA
GO:0005637 nuclear inner membrane FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPBC1778.02 occurs_in GO:0005637 nuclear inner membrane part_of GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body IPI
GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPBC1778.02 occurs_in GO:0005637 nuclear inner membrane part_of GO:0032121 meiotic attachment of telomeric heterochromatin to spindle pole body IPI
GO:0061077 chaperone-mediated protein folding FoldBasedPredictor GO:0044183 protein folding chaperone happens_during GO:0034605 cellular response to heat part_of GO:0061077 chaperone-mediated protein folding EXP
GO:0140727 siRNA-mediated pericentric heterochromatin formation FoldBasedPredictor GO:0140463 chromatin-protein adaptor activity has_input PomBase:SPCC1739.03 part_of GO:0140727 siRNA-mediated pericentric heterochromatin formation EXP
GO:0061817 endoplasmic reticulum-plasma membrane tethering FoldBasedPredictor GO:0043495 protein-membrane adaptor activity part_of GO:0061817 endoplasmic reticulum-plasma membrane tethering TAS
GO:0002098 tRNA wobble uridine modification FoldBasedPredictor GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor has_input PomBase:SPAC8F11.02c part_of GO:0002098 tRNA wobble uridine modification ISO
GO:0006367 transcription initiation at RNA polymerase II promoter FoldBasedPredictor GO:0016251 RNA polymerase II general transcription initiation factor activity part_of GO:0006367 transcription initiation at RNA polymerase II promoter EXP
GO:0031028 septation initiation signaling FoldBasedPredictor GO:0035591 signaling adaptor activity has_input PomBase:SPCC1739.11c occurs_in GO:0044732 mitotic spindle pole body part_of GO:0031028 septation initiation signaling EXP
GO:0044732 mitotic spindle pole body FoldBasedPredictor GO:0035591 signaling adaptor activity has_input PomBase:SPCC1739.11c occurs_in GO:0044732 mitotic spindle pole body part_of GO:0031028 septation initiation signaling EXP
GO:0060261 positive regulation of transcription initiation by RNA polymerase II FoldBasedPredictor GO:0003713 transcription coactivator activity has_input PomBase:SPBC19F8.07 part_of GO:0060261 positive regulation of transcription initiation by RNA polymerase II IDA
GO:0006361 transcription initiation at RNA polymerase I promoter FoldBasedPredictor GO:0001181 RNA polymerase I general transcription initiation factor activity part_of GO:0006361 transcription initiation at RNA polymerase I promoter IDA
GO:1900745 positive regulation of p38MAPK cascade FoldBasedPredictor GO:0030295 protein kinase activator activity happens_during GO:0034599 cellular response to oxidative stress has_input PomBase:SPAC9G1.02 part_of GO:1900745 positive regulation of p38MAPK cascade EXP
GO:0035825 homologous recombination FoldBasedPredictor GO:0031490 chromatin DNA binding happens_during GO:0007127 meiosis I part_of GO:0035825 homologous recombination IDA
GO:0000791 euchromatin FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPAC27D7.03c has_input PomBase:SPCC736.12c occurs_in GO:0000791 euchromatin part_of GO:0140648 positive regulation of cell cycle switching, mitotic to meiotic cell cycle IPI
GO:0140648 positive regulation of cell cycle switching, mitotic to meiotic cell cycle FoldBasedPredictor GO:0030674 protein-macromolecule adaptor activity has_input PomBase:SPAC27D7.03c has_input PomBase:SPCC736.12c occurs_in GO:0000791 euchromatin part_of GO:0140648 positive regulation of cell cycle switching, mitotic to meiotic cell cycle IPI
GO:0180023 cytosolic large ribosomal subunit assembly FoldBasedPredictor GO:0140597 protein carrier chaperone has_input PomBase:SPBP8B7.03c part_of GO:0180023 cytosolic large ribosomal subunit assembly ISO
GO:0006506 GPI anchor biosynthetic process FoldBasedPredictor GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity part_of GO:0006506 GPI anchor biosynthetic process ISO
GO:0044732 mitotic spindle pole body FoldBasedPredictor GO:0035591 signaling adaptor activity happens_during GO:0000085 mitotic G2 phase has_input PomBase:SPAC23C11.16 occurs_in GO:0044732 mitotic spindle pole body part_of GO:0000086 G2/M transition of mitotic cell cycle IPI
GO:0000086 G2/M transition of mitotic cell cycle FoldBasedPredictor GO:0035591 signaling adaptor activity happens_during GO:0000085 mitotic G2 phase has_input PomBase:SPAC23C11.16 occurs_in GO:0044732 mitotic spindle pole body part_of GO:0000086 G2/M transition of mitotic cell cycle IPI
GO:0046854 phosphatidylinositol phosphate biosynthetic process FoldBasedPredictor GO:0043495 protein-membrane adaptor activity has_input PomBase:SPBC577.06c occurs_in GO:0005886 plasma membrane part_of GO:0046854 phosphatidylinositol phosphate biosynthetic process NAS
GO:0005886 plasma membrane FoldBasedPredictor GO:0043495 protein-membrane adaptor activity has_input PomBase:SPBC577.06c occurs_in GO:0005886 plasma membrane part_of GO:0046854 phosphatidylinositol phosphate biosynthetic process NAS
GO:1904868 telomerase catalytic core complex assembly FoldBasedPredictor GO:0070034 telomerase RNA binding part_of GO:1904868 telomerase catalytic core complex assembly IPI
GO:0016558 protein import into peroxisome matrix FoldBasedPredictor GO:0043495 protein-membrane adaptor activity part_of GO:0016558 protein import into peroxisome matrix ISO
GO:0045141 meiotic telomere clustering FoldBasedPredictor GO:0140473 telomere-nuclear envelope anchor activity has_input PomBase:SPBC1778.02 has_input PomBase:SPBC19C7.10 part_of GO:0045141 meiotic telomere clustering IPI
GO:0032933 SREBP signaling pathway FoldBasedPredictor GO:0031625 ubiquitin protein ligase binding happens_during GO:0071456 cellular response to hypoxia part_of GO:0032933 SREBP signaling pathway IPI
GO:0120271 negative regulation of nuclear mRNA surveillance of meiosis-specific transcripts FoldBasedPredictor GO:0140311 protein sequestering activity part_of GO:0120271 negative regulation of nuclear mRNA surveillance of meiosis-specific transcripts IPI
GO:0006612 protein targeting to membrane FoldBasedPredictor GO:0019706 protein-cysteine S-palmitoyltransferase activity has_input PomBase:SPAC13C5.03 part_of GO:0006612 protein targeting to membrane IMP
GO:0016180 snRNA processing FoldBasedPredictor GO:0030563 snRNA 2'-O-ribose methylation guide activity has_input PomBase:SPSNRNA.06 part_of GO:0016180 snRNA processing EXP
GO:1990571 meiotic centromere clustering FoldBasedPredictor GO:0005515 protein binding happens_during GO:0098768 meiotic prometaphase I occurs_in GO:0000776 kinetochore part_of GO:1990571 meiotic centromere clustering IPI
GO:0000776 kinetochore FoldBasedPredictor GO:0005515 protein binding happens_during GO:0098768 meiotic prometaphase I occurs_in GO:0000776 kinetochore part_of GO:1990571 meiotic centromere clustering IPI
GO:0031028 septation initiation signaling FoldBasedPredictor GO:0030295 protein kinase activator activity has_input PomBase:SPAC9G1.09 part_of GO:0031028 septation initiation signaling IDA
GO:0062200 RAM/MOR signaling FoldBasedPredictor GO:0035591 signaling adaptor activity part_of GO:0062200 RAM/MOR signaling EXP
GO:0006367 transcription initiation at RNA polymerase II promoter FoldBasedPredictor GO:0016251 RNA polymerase II general transcription initiation factor activity part_of GO:0006367 transcription initiation at RNA polymerase II promoter EXP
GO:0008033 tRNA processing FoldBasedPredictor GO:0000171 ribonuclease MRP activity part_of GO:0008033 tRNA processing EXP
GO:0005759 mitochondrial matrix FoldBasedPredictor GO:0008494 translation activator activity occurs_in GO:0005759 mitochondrial matrix part_of GO:0070134 positive regulation of mitochondrial translational initiation EXP
GO:0070134 positive regulation of mitochondrial translational initiation FoldBasedPredictor GO:0008494 translation activator activity occurs_in GO:0005759 mitochondrial matrix part_of GO:0070134 positive regulation of mitochondrial translational initiation EXP
GO:0045040 protein insertion into mitochondrial outer membrane FoldBasedPredictor GO:0032977 membrane insertase activity has_input PomBase:SPAC6B12.12 part_of GO:0045040 protein insertion into mitochondrial outer membrane IMP

Table of contents

Report

Group: pombase - Dataset: pombase

SUMMARY

Header From Original Association File

Contents

MESSAGES

gorule-0000001

Messages

gorule-0000002

gorule-0000005

gorule-0000006

gorule-0000007

gorule-0000008

Messages

gorule-0000011

gorule-0000013

Messages

gorule-0000015

gorule-0000016

Messages

gorule-0000017

gorule-0000018

Messages

gorule-0000020

Messages

gorule-0000022

gorule-0000027

Messages

gorule-0000028

gorule-0000029

Messages

gorule-0000030

gorule-0000037

gorule-0000039

gorule-0000042

gorule-0000043

gorule-0000046

gorule-0000050

gorule-0000055

gorule-0000058

gorule-0000061

gorule-0000063

Messages

gorule-0000064

gorule-0000065

other

Predictions

Predictions (experimental)