Group: paint - Dataset: paint_sgd
SUMMARY
This report generated on 2025-09-15
- Associations: 15551
- Lines in file (incl headers): 15577
- Lines skipped: 20
!gaf-version: 2.2
!Created on Tue Sep 9 10:26:00 2025.
!generated-by: PANTHER
!date-generated: 2025-09-09
!PANTHER version: v.19.0.
!GO version: 2025-07-22.
Contents
gorule-0000002
gorule-0000005
gorule-0000006
gorule-0000007
gorule-0000008
gorule-0000011
gorule-0000013
gorule-0000015
gorule-0000016
gorule-0000017
gorule-0000018
gorule-0000020
gorule-0000022
gorule-0000027
gorule-0000028
gorule-0000029
gorule-0000030
gorule-0000037
gorule-0000039
gorule-0000042
gorule-0000043
gorule-0000046
gorule-0000050
gorule-0000055
gorule-0000058
gorule-0000061
gorule-0000063
gorule-0000064
gorule-0000065
other
MESSAGES
gorule-0000002
No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'
gorule-0000005
IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
gorule-0000007
IPI should not be used with GO:0003824 catalytic activity or descendents
gorule-0000008
No annotations should be made to uninformative high level terms
Messages
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004206 CPR6 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002253524|FB:FBgn0039581|UniProtKB:Q13427|dictyBase:DDB_G0280401|WB:WBGene00000884|UniProtKB:Q9UNP9|dictyBase:DDB_G0269120|RGD:620315 C Peptidyl-prolyl cis-trans isomerase CPR6 UniProtKB:P53691|PTN000116523 protein taxon:559292 20240918 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000007251 HUB1 involved_in GO:0036211 GO_REF:0000033 IBA PANTHER:PTN000315756|SGD:S000007251 P Ubiquitin-like modifier HUB1 UniProtKB:Q6Q546|PTN000315803 protein taxon:559292 20240205 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003615 PRY1 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0037650|FB:FBgn0031412|FB:FBgn0035042|MGI:MGI:1916536|FB:FBgn0054002 P Protein PRY1 UniProtKB:P47032|PTN000036722 protein taxon:559292 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002974 PMC1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000642960|TAIR:locus:2082528|UniProtKB:P20020|TAIR:locus:2062673|UniProtKB:Q57VN6|PomBase:SPAPB2B4.04c|UniProtKB:P23634|MGI:MGI:104653|TAIR:locus:2029794|SGD:S000002974|dictyBase:DDB_G0277861|MGI:MGI:105368|TAIR:locus:2120096 C Calcium-transporting ATPase 2 UniProtKB:P38929|PTN000643944 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001512 MAE1 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000601050|UniProtKB:Q16798 P NAD-dependent malic enzyme, mitochondrial UniProtKB:P36013|PTN000601159 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005938 IRC15 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|UniProtKB:P09622|RGD:735073|UniProtKB:Q8IAZ6|MGI:MGI:107450 P Increased recombination centers protein 15 UniProtKB:Q02733|PTN000530349 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001876 LPD1 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|UniProtKB:P09622|RGD:735073|UniProtKB:Q8IAZ6|MGI:MGI:107450 P Dihydrolipoyl dehydrogenase, mitochondrial UniProtKB:P09624|PTN000530350 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005055 CYB5 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000451724|UniProtKB:Q8I599|MGI:MGI:1926952|UniProtKB:Q385A5|RGD:620558|TAIR:locus:2028721|SGD:S000005055|UniProtKB:Q382H2|RGD:621551 C Cytochrome b5 UniProtKB:P40312|PTN000451738 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003819 APS2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|RGD:620188|MGI:MGI:2141861|SGD:S000003819|UniProtKB:P61966|dictyBase:DDB_G0289721|FB:FBgn0043012|SGD:S000004160|FB:FBgn0039132|TAIR:locus:2051905|PomBase:SPAP27G11.06c|UniProtKB:P56377|RGD:1311115 C AP-2 complex subunit sigma UniProtKB:Q00381|PTN000204319 protein taxon:559292 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001721 PRY2 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0037650|FB:FBgn0031412|FB:FBgn0035042|MGI:MGI:1916536|FB:FBgn0054002 P Protein PRY2 UniProtKB:P36110|PTN000036720 protein taxon:559292 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002410 RCR2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002000118|SGD:S000002410|SGD:S000000209 C Protein RCR2 UniProtKB:Q03446|PTN002000126 protein taxon:559292 20230111 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003590 TIM54 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|UniProtKB:Q53H12|UniProtKB:Q9NYA1|FB:FBgn0052484|SGD:S000003590|TAIR:locus:6530298214|MGI:MGI:1316649|TAIR:locus:2119642|dictyBase:DDB_G0272522|RGD:620048|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1861380|WB:WBGene00007918|SGD:S000004250 C Mitochondrial import inner membrane translocase subunit TIM54 UniProtKB:P47045|PTN000961586 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000006315 DBF20 involved_in GO:0000910 GO_REF:0000033 IBA PANTHER:PTN008614896|PomBase:SPAC24B11.11c|SGD:S000006315|dictyBase:DDB_G0284839 P Serine_threonine-protein kinase DBF20 UniProtKB:P32328|PTN000683463 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004055 ENV10 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000337666|FB:FBgn0034059|UniProtKB:Q38FE8|UniProtKB:Q9BTX3 C SRP-independent targeting protein 2 UniProtKB:Q99382|PTN000337710 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003614 PRY3 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0037650|FB:FBgn0031412|FB:FBgn0035042|MGI:MGI:1916536|FB:FBgn0054002 P Cell wall protein PRY3 UniProtKB:P47033|PTN002232859 protein taxon:559292 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004572 MDM1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000512111|UniProtKB:Q9Y5W7|MGI:MGI:2142610|MGI:MGI:1921581|UniProtKB:Q9Y5W8|FB:FBgn0029976 C Structural protein MDM1 UniProtKB:Q01846|PTN000512247 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003324 DBF2 involved_in GO:0000910 GO_REF:0000033 IBA PANTHER:PTN008614896|PomBase:SPAC24B11.11c|SGD:S000006315|dictyBase:DDB_G0284839 P Cell cycle protein kinase DBF2 UniProtKB:P22204|PTN000683464 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002728 SWA2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000571055|UniProtKB:O14976|UniProtKB:Q27974|SGD:S000002728 C Auxilin-like clathrin uncoating factor SWA2 UniProtKB:Q06677|PTN000571123 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005697 LCB4 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|UniProtKB:Q53H12|UniProtKB:Q9NYA1|FB:FBgn0052484|SGD:S000003590|TAIR:locus:6530298214|MGI:MGI:1316649|TAIR:locus:2119642|dictyBase:DDB_G0272522|RGD:620048|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1861380|WB:WBGene00007918|SGD:S000004250 C Sphingoid long chain base kinase 4 UniProtKB:Q12246|PTN000270714 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004250 LCB5 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|UniProtKB:Q53H12|UniProtKB:Q9NYA1|FB:FBgn0052484|SGD:S000003590|TAIR:locus:6530298214|MGI:MGI:1316649|TAIR:locus:2119642|dictyBase:DDB_G0272522|RGD:620048|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1861380|WB:WBGene00007918|SGD:S000004250 C Sphingoid long chain base kinase 5 UniProtKB:Q06147|PTN000270715 protein taxon:559292 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001126 STE12 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN001026538|UniProtKB:O74252|SGD:S000001126 P Protein STE12 UniProtKB:P13574|PTN001427574 protein taxon:559292 20180419 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004160 APS1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|RGD:620188|MGI:MGI:2141861|SGD:S000003819|UniProtKB:P61966|dictyBase:DDB_G0289721|FB:FBgn0043012|SGD:S000004160|FB:FBgn0039132|TAIR:locus:2051905|PomBase:SPAP27G11.06c|UniProtKB:P56377|RGD:1311115 C AP-1 complex subunit sigma-1 UniProtKB:P35181|PTN000204440 protein taxon:559292 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005269 FIG4 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000127900|UniProtKB:Q92562|SGD:S000005269|TAIR:locus:2009477|RGD:1311375 C Polyphosphoinositide phosphatase UniProtKB:P42837|PTN000127990 protein taxon:559292 20250904 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002781 FRQ1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN001128334|PomBase:SPAC18B11.04|SGD:S000002781 C Calcium-binding protein NCS-1 UniProtKB:Q06389|PTN000550929 protein taxon:559292 20240206 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000000209 RCR1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002000118|SGD:S000002410|SGD:S000000209 C Protein RCR1 UniProtKB:P38212|PTN002000125 protein taxon:559292 20230111 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003561 APS3 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|RGD:620188|MGI:MGI:2141861|SGD:S000003819|UniProtKB:P61966|dictyBase:DDB_G0289721|FB:FBgn0043012|SGD:S000004160|FB:FBgn0039132|TAIR:locus:2051905|PomBase:SPAP27G11.06c|UniProtKB:P56377|RGD:1311115 C AP-3 complex subunit sigma UniProtKB:P47064|PTN000204531 protein taxon:559292 20250902 GO_Central
gorule-0000011
ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND
gorule-0000013
Taxon-appropriate annotation check
Messages
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000005072 TEP1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000959472|MGI:MGI:109583|dictyBase:DDB_G0286557 P Probable phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TEP1 UniProtKB:P53916|PTN000266993 protein taxon:559292 20200305 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000270 NRG2 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|FB:FBgn0002521|MGI:MGI:99150 C Probable transcriptional regulator NRG2 UniProtKB:P38082|PTN000360882 protein taxon:559292 20170602 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003034 SGF73 involved_in GO:0031048 GO_REF:0000033 IBA PANTHER:PTN001031589|PomBase:SPCC126.04c P SAGA-associated factor 73 UniProtKB:P53165|PTN000387891 protein taxon:559292 20240213 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003930 LMO1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000299186|FB:FBgn0032409|dictyBase:DDB_G0278051|UniProtKB:Q96JJ3|WB:WBGene00000426|UniProtKB:Q92556 P ELMO family protein LMO1 UniProtKB:Q07799|PTN001764799 protein taxon:559292 20221007 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000514 STP22 involved_in GO:0008333 GO_REF:0000033 IBA PANTHER:PTN000592420|RGD:3909|WB:WBGene00015658 P Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease UniProtKB:P25604|PTN000592498 protein taxon:559292 20211108 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000004460 YPT7 is_active_in GO:0045335 GO_REF:0000033 IBA PANTHER:PTN000635769|FB:FBgn0015795|UniProtKB:Q96AH8|dictyBase:DDB_G0269236|UniProtKB:P51151|WB:WBGene00004271|MGI:MGI:2442295|UniProtKB:P51149|UniProtKB:Q9NP90 C Ypt_Rab-type GTPase YPT7 UniProtKB:P32939|PTN000635835 protein taxon:559292 20250413 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000641 RRT12 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|UniProtKB:Q8NBP7|RGD:728909|MGI:MGI:2140260 C Subtilase-type proteinase RRT12 UniProtKB:P25381|PTN000083480 protein taxon:559292 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003614 PRY3 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0250842|MGI:MGI:1921366|UniProtKB:A5D8T8 C Cell wall protein PRY3 UniProtKB:P47033|PTN002232859 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001174 ECM14 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000194073|UniProtKB:Q9UI42|UniProtKB:P15085|RGD:71035 C Inactive metallocarboxypeptidase ECM14 UniProtKB:P38836|PTN000194408 protein taxon:559292 20240729 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000004715 MYO5 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:O00159|UniProtKB:Q9UBC5|MGI:MGI:1927091|UniProtKB:P47807|MGI:MGI:107732 C Myosin-5 UniProtKB:Q04439|PTN000321837 protein taxon:559292 20240205 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000002450 NRG1 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|FB:FBgn0002521|MGI:MGI:99150 C Transcriptional regulator NRG1 UniProtKB:Q03125|PTN000149122 protein taxon:559292 20170602 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000257 YBR053C involved_in GO:0019853 GO_REF:0000033 IBA PANTHER:PTN000097355|MGI:MGI:108024 P Uncharacterized protein YBR053C UniProtKB:P38235|PTN001656385 protein taxon:559292 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000005529 YSP3 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|UniProtKB:Q8NBP7|RGD:728909|MGI:MGI:2140260 C Subtilisin-like protease 3 UniProtKB:P25036|PTN000083484 protein taxon:559292 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003668 YJL132W is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000576507|UniProtKB:P80109|MGI:MGI:106604|UniProtKB:P80108|RGD:631371 C Uncharacterized protein YJL132W UniProtKB:P47014|PTN000576534 protein taxon:559292 20240206 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003991 YLR001C is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000096378|RGD:1305285|UniProtKB:Q15582|MGI:MGI:99959 C FAS1 domain-containing protein YLR001C UniProtKB:Q07895|PTN000096466 protein taxon:559292 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001721 PRY2 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0250842|MGI:MGI:1921366|UniProtKB:A5D8T8 C Protein PRY2 UniProtKB:P36110|PTN000036720 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001612 MYO3 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:O00159|UniProtKB:Q9UBC5|MGI:MGI:1927091|UniProtKB:P47807|MGI:MGI:107732 C Myosin-3 UniProtKB:P36006|PTN000321838 protein taxon:559292 20240205 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003615 PRY1 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|FB:FBgn0250842|MGI:MGI:1921366|UniProtKB:A5D8T8 C Protein PRY1 UniProtKB:P47032|PTN000036722 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000786 PRB1 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|UniProtKB:Q8NBP7|RGD:728909|MGI:MGI:2140260 C Cerevisin UniProtKB:P09232|PTN000083485 protein taxon:559292 20181004 GO_Central
gorule-0000015
Dual species taxon check
gorule-0000016
With/From: IC annotations require a With/From GO ID
gorule-0000017
IDA annotations must not have a With/From entry
gorule-0000018
IPI annotations require a With/From entry
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
Messages
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0019933) --
SGD S000005082 SRV2 involved_in GO:0019933 GO_REF:0000033 IBA PANTHER:PTN000068843|CGD:CAL0000183073 P Adenylyl cyclase-associated protein UniProtKB:P17555|PTN000068919 protein taxon:559292 20210226 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000000314 ALG1 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000315506|TAIR:locus:2017963 P Chitobiosyldiphosphodolichol beta-mannosyltransferase UniProtKB:P16661|PTN000315553 protein taxon:559292 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000001684 MNN4 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN001034988|MGI:MGI:2179507 P Protein MNN4 UniProtKB:P36044|PTN000084394 protein taxon:559292 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000004707 SRT1 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000815984|SGD:S000000206|SGD:S000004707 P Dehydrodolichyl diphosphate synthase complex subunit SRT1 UniProtKB:Q03175|PTN000033371 protein taxon:559292 20180916 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000002213 PSA1 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000500861|SGD:S000002213|ZFIN:ZDB-GENE-040801-234 P Mannose-1-phosphate guanyltransferase UniProtKB:P41940|PTN000500912 protein taxon:559292 20210604 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000003822 YJR061W involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN001034988|MGI:MGI:2179507 P Uncharacterized protein YJR061W UniProtKB:P40355|PTN001809790 protein taxon:559292 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000002352 NUS1 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000488276|SGD:S000002352 P Dehydrodolichyl diphosphate synthase complex subunit NUS1 UniProtKB:Q12063|PTN000488311 protein taxon:559292 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000000178 ALG3 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000291297|TAIR:locus:2043343|SGD:S000000178 P Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase UniProtKB:P38179|PTN000291344 protein taxon:559292 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
SGD S000000206 RER2 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000815984|SGD:S000000206|SGD:S000004707 P Dehydrodolichyl diphosphate synthase complex subunit RER2 UniProtKB:P35196|PTN000033374 protein taxon:559292 20180916 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006529) --
SGD S000006349 ASN1 involved_in GO:0006529 GO_REF:0000033 IBA PANTHER:PTN000206334|SGD:S000003356|TAIR:locus:2099580|UniProtKB:P22106|SGD:S000006349|UniProtKB:P08243|RGD:2162|PomBase:SPBC119.10 P Asparagine synthetase [glutamine-hydrolyzing] 1 UniProtKB:P49089|PTN000206465 protein taxon:559292 20250902 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006529) --
SGD S000003356 ASN2 involved_in GO:0006529 GO_REF:0000033 IBA PANTHER:PTN000206334|SGD:S000003356|TAIR:locus:2099580|UniProtKB:P22106|SGD:S000006349|UniProtKB:P08243|RGD:2162|PomBase:SPBC119.10 P Asparagine synthetase [glutamine-hydrolyzing] 2 UniProtKB:P49090|PTN000206464 protein taxon:559292 20250902 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0036456) --
SGD S000000844 MXR1 enables GO:0036456 GO_REF:0000033 IBA PANTHER:PTN000019085|UniProtKB:P0A744|PomBase:SPAC29E6.05c F Peptide methionine sulfoxide reductase UniProtKB:P40029|PTN000019309 protein taxon:559292 20181029 GO_Central
gorule-0000022
Check for, and filter, annotations made to retracted publications
gorule-0000027
Each identifier in GAF is valid
Messages
- WARNING - Invalid identifier: GORULE:0000027: 150340783 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150340783) --
SGD S000005760 RPL33B part_of GO:0022625 GO_REF:0000033 IBA PANTHER:PTN000096770|RGD:628793|UniProtKB:P18077|PomBase:SPBC1921.01c|SGD:S000006064|MGI:MGI:1928894|RGD:150340783|SGD:S000005760 C Large ribosomal subunit protein eL33B UniProtKB:P41056|PTN000096837 protein taxon:559292 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
SGD S000004998 MSG5 involved_in GO:0007165 GO_REF:0000033 IBA PANTHER:PTN004128558|FB:FBgn0243512|WB:WBGene00003043|RGD:150342989|RGD:620897|SGD:S000004998|SGD:S000001375 P Tyrosine-protein phosphatase MSG5 UniProtKB:P38590|PTN000017604 protein taxon:559292 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150340783 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150340783) --
SGD S000006064 RPL33A part_of GO:0022625 GO_REF:0000033 IBA PANTHER:PTN000096770|RGD:628793|UniProtKB:P18077|PomBase:SPBC1921.01c|SGD:S000006064|MGI:MGI:1928894|RGD:150340783|SGD:S000005760 C Large ribosomal subunit protein eL33A UniProtKB:P05744|PTN000096838 protein taxon:559292 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
SGD S000001375 SDP1 involved_in GO:0043409 GO_REF:0000033 IBA PANTHER:PTN001605855|UniProtKB:Q9Y6W6|UniProtKB:Q9BY84|SGD:S000004998|UniProtKB:Q13115|WB:WBGene00006923|RGD:150342989|UniProtKB:Q91790|UniProtKB:P28562|MGI:MGI:105120|UniProtKB:Q16828|RGD:620897|ZFIN:ZDB-GENE-040801-188|MGI:MGI:2387107|MGI:MGI:1927070|RGD:70978|UniProtKB:Q16829|ZFIN:ZDB-GENE-040426-709|PomBase:SPBC1685.01|ZFIN:ZDB-GENE-030613-1|FB:FBgn0036844|dictyBase:DDB_G0269918 P Dual-specificity protein phosphatase SDP1 UniProtKB:P40479|PTN000017603 protein taxon:559292 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
SGD S000001375 SDP1 involved_in GO:0007165 GO_REF:0000033 IBA PANTHER:PTN004128558|FB:FBgn0243512|WB:WBGene00003043|RGD:150342989|RGD:620897|SGD:S000004998|SGD:S000001375 P Dual-specificity protein phosphatase SDP1 UniProtKB:P40479|PTN000017603 protein taxon:559292 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
SGD S000004998 MSG5 involved_in GO:0043409 GO_REF:0000033 IBA PANTHER:PTN001605855|UniProtKB:Q9Y6W6|UniProtKB:Q9BY84|SGD:S000004998|UniProtKB:Q13115|WB:WBGene00006923|RGD:150342989|UniProtKB:Q91790|UniProtKB:P28562|MGI:MGI:105120|UniProtKB:Q16828|RGD:620897|ZFIN:ZDB-GENE-040801-188|MGI:MGI:2387107|MGI:MGI:1927070|RGD:70978|UniProtKB:Q16829|ZFIN:ZDB-GENE-040426-709|PomBase:SPBC1685.01|ZFIN:ZDB-GENE-030613-1|FB:FBgn0036844|dictyBase:DDB_G0269918 P Tyrosine-protein phosphatase MSG5 UniProtKB:P38590|PTN000017604 protein taxon:559292 20250902 GO_Central
gorule-0000028
GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect
gorule-0000029
IEAs should be less than one year old.
gorule-0000030
Obsolete GO_REFs are not allowed
gorule-0000037
IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference
gorule-0000039
Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants
gorule-0000042
Qualifier: IKR evidence code requires a NOT qualifier
gorule-0000043
Check for valid combination of evidence code and GO_REF
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
Messages
- WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms --
SGD S000003863 VPS25 enables GO:0042803 GO_REF:0000033 IBA PANTHER:PTN000322234|UniProtKB:Q9BRG1 F Vacuolar protein-sorting-associated protein 25 UniProtKB:P47142|PTN000322275 protein taxon:559292 20170228 GO_Central
gorule-0000050
Annotations to ISS, ISA and ISO should not be self-referential
gorule-0000055
References should have only one ID per ID space
gorule-0000058
Object extensions should conform to the extensions-patterns.yaml file in metadata
gorule-0000061
Allowed gene product to term relations (gp2term)
gorule-0000063
Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)
gorule-0000064
TreeGrafter IEAs should be filtered for GO reference species
gorule-0000065
Annotations to term that are candidates for obsoletion should be produce a warning
other
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002196 Ser-tRNA(Ala) deacylase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004103 choline kinase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:1990259 histone H2AQ104 methyltransferase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0046521 sphingoid catabolic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046970 histone H4K16 deacetylase activity, NAD-dependent IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032452 histone demethylase activity IBA
GO:0015699 antimonite transmembrane transport AnnotationPropagation P GO:0015104 antimonite transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0089709 L-histidine transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0089722 phosphoenolpyruvate transmembrane transport AnnotationPropagation P GO:0089721 phosphoenolpyruvate transmembrane transporter activity IBA
GO:0035269 protein O-linked glycosylation via mannose AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070126 mitochondrial translational termination IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0005829 cytosol AnnotationPropagation C GO:0034498 early endosome to Golgi transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0010998 regulation of translational initiation by eIF2 alpha phosphorylation AnnotationPropagation P GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0008331 high voltage-gated calcium channel activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0008554 P-type sodium transporter activity IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:1902356 oxaloacetate(2-) transmembrane transport AnnotationPropagation P GO:0015131 oxaloacetate transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0035269 protein O-linked glycosylation via mannose AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0000007 low-affinity zinc ion transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0033214 siderophore-iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 AMP kinase activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000957 mitochondrial RNA catabolic process IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070150 mitochondrial glycyl-tRNA aminoacylation IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0000122 negative regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070901 mitochondrial tRNA methylation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0000014 single-stranded DNA endodeoxyribonuclease activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0031151 histone H3K79 methyltransferase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046972 histone H4K16 acetyltransferase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0001676 long-chain fatty acid metabolic process AnnotationPropagation P GO:0004467 long-chain fatty acid-CoA ligase activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016435 rRNA (guanine) methyltransferase activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0051500 D-tyrosyl-tRNA(Tyr) deacylase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006360 transcription by RNA polymerase I AnnotationPropagation P GO:0001181 RNA polymerase I general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006633 fatty acid biosynthetic process AnnotationPropagation P GO:0000036 acyl carrier activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0030970 retrograde protein transport, ER to cytosol IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046975 histone H3K36 methyltransferase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042054 histone methyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0072354 histone H3T3 kinase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019150 D-ribulokinase activity IBA
GO:0010498 proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0089709 L-histidine transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0032542 sulfiredoxin activity IBA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071031 nuclear mRNA surveillance of mRNA 3'-end processing IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008821 crossover junction DNA endonuclease activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070183 mitochondrial tryptophanyl-tRNA aminoacylation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0016020 membrane AnnotationPropagation C GO:0030149 sphingolipid catabolic process IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046975 histone H3K36 methyltransferase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0022841 potassium ion leak channel activity IBA
GO:0015887 pantothenate transmembrane transport AnnotationPropagation P GO:0015233 pantothenate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0006390 mitochondrial transcription AnnotationPropagation P GO:0034246 mitochondrial transcription factor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0016020 membrane AnnotationPropagation C GO:0006673 inositol phosphoceramide metabolic process IBA
GO:0015706 nitrate transmembrane transport AnnotationPropagation P GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0097250 mitochondrial respirasome assembly IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0046902 regulation of mitochondrial membrane permeability IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0035269 protein O-linked glycosylation via mannose AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0051864 histone H3K36 demethylase activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006672 ceramide metabolic process IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046970 histone H4K16 deacetylase activity, NAD-dependent IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0033260 nuclear DNA replication IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0035269 protein O-linked glycosylation via mannose AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071040 nuclear polyadenylation-dependent antisense transcript catabolic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0043998 histone H2A acetyltransferase activity IBA
GO:1903710 spermine transmembrane transport AnnotationPropagation P GO:0000297 spermine transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005388 P-type calcium transporter activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0099116 tRNA 5'-end processing AnnotationPropagation P GO:0008193 tRNA guanylyltransferase activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019150 D-ribulokinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA