Group: paint - Dataset: paint_sgd
SUMMARY
This report generated on 2025-04-15
- Associations: 15134
- Lines in file (incl headers): 15174
- Lines skipped: 34
!gaf-version: 2.2
!Created on Wed Apr 9 13:49:09 2025.
!generated-by: PANTHER
!date-generated: 2025-04-09
!PANTHER version: v.19.0.
!GO version: 2025-03-16.
Contents
gorule-0000002
gorule-0000005
gorule-0000006
gorule-0000007
gorule-0000008
gorule-0000011
gorule-0000013
gorule-0000015
gorule-0000016
gorule-0000017
gorule-0000018
gorule-0000020
gorule-0000022
gorule-0000028
gorule-0000029
gorule-0000030
gorule-0000037
gorule-0000039
gorule-0000042
gorule-0000043
gorule-0000046
gorule-0000050
gorule-0000055
gorule-0000058
gorule-0000061
gorule-0000063
gorule-0000064
gorule-0000065
other
MESSAGES
gorule-0000002
No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'
gorule-0000005
IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
gorule-0000007
IPI should not be used with GO:0003824 catalytic activity or descendents
gorule-0000008
No annotations should be made to uninformative high level terms
Messages
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000000209 RCR1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002000118|SGD:S000002410|SGD:S000000209 C Protein RCR1 UniProtKB:P38212|PTN002000125 protein taxon:559292 20230111 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000028698 KSH1 involved_in GO:0046907 GO_REF:0000033 IBA PANTHER:PTN000325642|FB:FBgn0040890 P Protein Kish UniProtKB:Q8TGJ3|PTN000325703 protein taxon:559292 20170228 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000000335 CCZ1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000316458|UniProtKB:P86790|FB:FBgn0035470|SGD:S000000335|WB:WBGene00010283|UniProtKB:P86791 C Vacuolar fusion protein CCZ1 UniProtKB:P38273|PTN007601140 protein taxon:559292 20240730 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004206 CPR6 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002253524|UniProtKB:Q9UNP9|WB:WBGene00000884|UniProtKB:Q13427|FB:FBgn0039581|dictyBase:DDB_G0280401|RGD:620315|dictyBase:DDB_G0269120 C Peptidyl-prolyl cis-trans isomerase CPR6 UniProtKB:P53691|PTN000116523 protein taxon:559292 20240918 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001512 MAE1 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000601050|SGD:S000001512|UniProtKB:Q16798 P NAD-dependent malic enzyme, mitochondrial UniProtKB:P36013|PTN000601159 protein taxon:559292 20250327 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003590 TIM54 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|MGI:MGI:1861380|UniProtKB:Q53H12|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1316649|FB:FBgn0052484|SGD:S000004250|UniProtKB:Q9NYA1|dictyBase:DDB_G0272522|WB:WBGene00007918|TAIR:locus:6530298214|TAIR:locus:2119642|RGD:620048|SGD:S000003590 C Mitochondrial import inner membrane translocase subunit TIM54 UniProtKB:P47045|PTN000961586 protein taxon:559292 20250326 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003561 APS3 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|UniProtKB:P59780|PomBase:SPAP27G11.06c|FB:FBgn0039132|TAIR:locus:2051905|UniProtKB:P56377|dictyBase:DDB_G0289721|UniProtKB:Q92572|UniProtKB:Q9Y587|RGD:1311115|FB:FBgn0043012|SGD:S000003819|UniProtKB:P61966|RGD:620188|MGI:MGI:2141861|SGD:S000004160|UniProtKB:Q96PC3 C AP-3 complex subunit sigma UniProtKB:P47064|PTN000204531 protein taxon:559292 20240729 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004572 MDM1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000512111|UniProtKB:Q9Y5W7|MGI:MGI:1921581|MGI:MGI:2142610|UniProtKB:Q9Y5W8|FB:FBgn0029976|UniProtKB:Q9H3E2 C Structural protein MDM1 UniProtKB:Q01846|PTN000512247 protein taxon:559292 20230406 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001721 PRY2 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1916536|FB:FBgn0031412|SGD:S000003614|FB:FBgn0035042|FB:FBgn0037650|FB:FBgn0054002|MGI:MGI:1925331 P Protein PRY2 UniProtKB:P36110|PTN000036720 protein taxon:559292 20250326 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003823 NTA1 involved_in GO:0036211 GO_REF:0000033 IBA PANTHER:PTN000202768|SGD:S000003823 P Protein N-terminal amidase UniProtKB:P40354|PTN000202780 protein taxon:559292 20240205 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002974 PMC1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000642960|MGI:MGI:104653|MGI:MGI:105368|UniProtKB:P23634|SGD:S000002974|TAIR:locus:2062673|TAIR:locus:2120096|UniProtKB:Q57VN6|UniProtKB:P20020|PomBase:SPAPB2B4.04c|TAIR:locus:2029794|dictyBase:DDB_G0277861|TAIR:locus:2082528 C Calcium-transporting ATPase 2 UniProtKB:P38929|PTN000643944 protein taxon:559292 20250327 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004055 ENV10 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000337666|UniProtKB:Q9BTX3|FB:FBgn0034059 C SRP-independent targeting protein 2 UniProtKB:Q99382|PTN000337710 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000007251 HUB1 involved_in GO:0036211 GO_REF:0000033 IBA PANTHER:PTN000315756|SGD:S000007251 P Ubiquitin-like modifier HUB1 UniProtKB:Q6Q546|PTN000315803 protein taxon:559292 20240205 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003819 APS2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|UniProtKB:P59780|PomBase:SPAP27G11.06c|FB:FBgn0039132|TAIR:locus:2051905|UniProtKB:P56377|dictyBase:DDB_G0289721|UniProtKB:Q92572|UniProtKB:Q9Y587|RGD:1311115|FB:FBgn0043012|SGD:S000003819|UniProtKB:P61966|RGD:620188|MGI:MGI:2141861|SGD:S000004160|UniProtKB:Q96PC3 C AP-2 complex subunit sigma UniProtKB:Q00381|PTN000204319 protein taxon:559292 20240729 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002410 RCR2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002000118|SGD:S000002410|SGD:S000000209 C Protein RCR2 UniProtKB:Q03446|PTN002000126 protein taxon:559292 20230111 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003615 PRY1 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1916536|FB:FBgn0031412|SGD:S000003614|FB:FBgn0035042|FB:FBgn0037650|FB:FBgn0054002|MGI:MGI:1925331 P Protein PRY1 UniProtKB:P47032|PTN000036722 protein taxon:559292 20250326 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005055 CYB5 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000451724|RGD:621551|MGI:MGI:1926952|UniProtKB:P00167|SGD:S000005055|UniProtKB:Q8I599|RGD:620558|TAIR:locus:2028721 C Cytochrome b5 UniProtKB:P40312|PTN000451738 protein taxon:559292 20230603 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002781 FRQ1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN001128334|PomBase:SPAC18B11.04|SGD:S000002781 C Calcium-binding protein NCS-1 UniProtKB:Q06389|PTN000550929 protein taxon:559292 20240206 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005697 LCB4 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|MGI:MGI:1861380|UniProtKB:Q53H12|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1316649|FB:FBgn0052484|SGD:S000004250|UniProtKB:Q9NYA1|dictyBase:DDB_G0272522|WB:WBGene00007918|TAIR:locus:6530298214|TAIR:locus:2119642|RGD:620048|SGD:S000003590 C Sphingoid long chain base kinase 4 UniProtKB:Q12246|PTN000270714 protein taxon:559292 20250326 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005938 IRC15 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|UniProtKB:Q8IAZ6|UniProtKB:P0A9P0|UniProtKB:P09622|RGD:735073|MGI:MGI:107450|SGD:S000001876 P Increased recombination centers protein 15 UniProtKB:Q02733|PTN000530349 protein taxon:559292 20240307 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000002728 SWA2 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000571055|UniProtKB:Q27974|SGD:S000002728|UniProtKB:O14976 C Auxilin-like clathrin uncoating factor SWA2 UniProtKB:Q06677|PTN000571123 protein taxon:559292 20240206 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000005269 FIG4 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000127900|TAIR:locus:2009477|SGD:S000005269|RGD:1311375|UniProtKB:Q92562 C Polyphosphoinositide phosphatase UniProtKB:P42837|PTN000127990 protein taxon:559292 20230604 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000003614 PRY3 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1916536|FB:FBgn0031412|SGD:S000003614|FB:FBgn0035042|FB:FBgn0037650|FB:FBgn0054002|MGI:MGI:1925331 P Cell wall protein PRY3 UniProtKB:P47033|PTN002232859 protein taxon:559292 20250326 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001876 LPD1 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|UniProtKB:Q8IAZ6|UniProtKB:P0A9P0|UniProtKB:P09622|RGD:735073|MGI:MGI:107450|SGD:S000001876 P Dihydrolipoyl dehydrogenase, mitochondrial UniProtKB:P09624|PTN000530350 protein taxon:559292 20240307 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000001126 STE12 involved_in GO:0019953 GO_REF:0000033 IBA PANTHER:PTN001026538|SGD:S000001126|UniProtKB:O74252 P Protein STE12 UniProtKB:P13574|PTN001427574 protein taxon:559292 20180419 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004160 APS1 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|UniProtKB:P59780|PomBase:SPAP27G11.06c|FB:FBgn0039132|TAIR:locus:2051905|UniProtKB:P56377|dictyBase:DDB_G0289721|UniProtKB:Q92572|UniProtKB:Q9Y587|RGD:1311115|FB:FBgn0043012|SGD:S000003819|UniProtKB:P61966|RGD:620188|MGI:MGI:2141861|SGD:S000004160|UniProtKB:Q96PC3 C AP-1 complex subunit sigma-1 UniProtKB:P35181|PTN000204440 protein taxon:559292 20240729 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
SGD S000004250 LCB5 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|MGI:MGI:1861380|UniProtKB:Q53H12|SGD:S000005697|UniProtKB:Q9NRA0|MGI:MGI:1316649|FB:FBgn0052484|SGD:S000004250|UniProtKB:Q9NYA1|dictyBase:DDB_G0272522|WB:WBGene00007918|TAIR:locus:6530298214|TAIR:locus:2119642|RGD:620048|SGD:S000003590 C Sphingoid long chain base kinase 5 UniProtKB:Q06147|PTN000270715 protein taxon:559292 20250326 GO_Central
gorule-0000011
ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND
gorule-0000013
Taxon-appropriate annotation check
Messages
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000257 YBR053C involved_in GO:0019853 GO_REF:0000033 IBA PANTHER:PTN000097355|MGI:MGI:108024 P Uncharacterized protein YBR053C UniProtKB:P38235|PTN001656385 protein taxon:559292 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000270 NRG2 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|MGI:MGI:99150|FB:FBgn0002521 C Probable transcriptional regulator NRG2 UniProtKB:P38082|PTN000360882 protein taxon:559292 20170602 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000002450 NRG1 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|MGI:MGI:99150|FB:FBgn0002521 C Transcriptional regulator NRG1 UniProtKB:Q03125|PTN000149122 protein taxon:559292 20170602 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001612 MYO3 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:P47807|UniProtKB:Q9UBC5|MGI:MGI:107732|UniProtKB:O00159|MGI:MGI:1927091 C Myosin-3 UniProtKB:P36006|PTN000321838 protein taxon:559292 20240205 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003615 PRY1 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1921366|FB:FBgn0250842|UniProtKB:A5D8T8 C Protein PRY1 UniProtKB:P47032|PTN000036722 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000004460 YPT7 is_active_in GO:0045335 GO_REF:0000033 IBA PANTHER:PTN000635769|dictyBase:DDB_G0269236|FB:FBgn0015795|WB:WBGene00004271|UniProtKB:Q96AH8|UniProtKB:P51151|UniProtKB:P51149|MGI:MGI:2442295|UniProtKB:Q9NP90 C Ypt_Rab-type GTPase YPT7 UniProtKB:P32939|PTN000635835 protein taxon:559292 20250328 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003938 BPT1 enables GO:0015127 GO_REF:0000033 IBA PANTHER:PTN001200390|SGD:S000002542|SGD:S000003938 F Bile pigment transporter 1 UniProtKB:P14772|PTN000658408 protein taxon:559292 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001089 AAP1 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000164250|UniProtKB:P15144 C Alanine_arginine aminopeptidase UniProtKB:P37898|PTN000164773 protein taxon:559292 20231012 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003930 LMO1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000299186|UniProtKB:Q92556|dictyBase:DDB_G0278051|UniProtKB:Q96JJ3|FB:FBgn0032409|WB:WBGene00000426 P ELMO family protein LMO1 UniProtKB:Q07799|PTN001764799 protein taxon:559292 20221007 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001399 TMA108 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000164250|UniProtKB:P15144 C Protein TMA108 UniProtKB:P40462|PTN000164769 protein taxon:559292 20231012 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000005529 YSP3 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|RGD:728909|MGI:MGI:2140260|UniProtKB:Q8NBP7 C Subtilisin-like protease 3 UniProtKB:P25036|PTN000083484 protein taxon:559292 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000641 RRT12 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|RGD:728909|MGI:MGI:2140260|UniProtKB:Q8NBP7 C Subtilase-type proteinase RRT12 UniProtKB:P25381|PTN000083480 protein taxon:559292 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000786 PRB1 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|RGD:728909|MGI:MGI:2140260|UniProtKB:Q8NBP7 C Cerevisin UniProtKB:P09232|PTN000083485 protein taxon:559292 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001174 ECM14 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000194073|UniProtKB:Q9UI42|RGD:71035|UniProtKB:P15085 C Inactive metallocarboxypeptidase ECM14 UniProtKB:P38836|PTN000194408 protein taxon:559292 20240729 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000000514 STP22 involved_in GO:0008333 GO_REF:0000033 IBA PANTHER:PTN000592420|WB:WBGene00015658|RGD:3909 P Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease UniProtKB:P25604|PTN000592498 protein taxon:559292 20211108 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003614 PRY3 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1921366|FB:FBgn0250842|UniProtKB:A5D8T8 C Cell wall protein PRY3 UniProtKB:P47033|PTN002232859 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003991 YLR001C is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000096378|RGD:1305285|UniProtKB:Q15582|MGI:MGI:99959 C FAS1 domain-containing protein YLR001C UniProtKB:Q07895|PTN000096466 protein taxon:559292 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003668 YJL132W is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000576507|UniProtKB:P80108|UniProtKB:P80109|RGD:631371|MGI:MGI:106604 C Uncharacterized protein YJL132W UniProtKB:P47014|PTN000576534 protein taxon:559292 20240206 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000005072 TEP1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000959472|dictyBase:DDB_G0286557|MGI:MGI:109583 P Probable phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TEP1 UniProtKB:P53916|PTN000266993 protein taxon:559292 20200305 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000003034 SGF73 involved_in GO:0031048 GO_REF:0000033 IBA PANTHER:PTN001031589|PomBase:SPCC126.04c P SAGA-associated factor 73 UniProtKB:P53165|PTN000387891 protein taxon:559292 20240213 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000004715 MYO5 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:P47807|UniProtKB:Q9UBC5|MGI:MGI:107732|UniProtKB:O00159|MGI:MGI:1927091 C Myosin-5 UniProtKB:Q04439|PTN000321837 protein taxon:559292 20240205 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001721 PRY2 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000036124|MGI:MGI:1921366|FB:FBgn0250842|UniProtKB:A5D8T8 C Protein PRY2 UniProtKB:P36110|PTN000036720 protein taxon:559292 20170512 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000001640 APE2 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000164250|UniProtKB:P15144 C Aminopeptidase 2, mitochondrial UniProtKB:P32454|PTN000164774 protein taxon:559292 20231012 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
SGD S000002542 YCF1 enables GO:0015127 GO_REF:0000033 IBA PANTHER:PTN001200390|SGD:S000002542|SGD:S000003938 F Metal resistance protein YCF1 UniProtKB:P39109|PTN000658409 protein taxon:559292 20170228 GO_Central
gorule-0000015
Dual species taxon check
gorule-0000016
With/From: IC annotations require a With/From GO ID
gorule-0000017
IDA annotations must not have a With/From entry
gorule-0000018
IPI annotations require a With/From entry
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
Messages
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0004127) --
SGD S000001507 URA6 enables GO:0004127 GO_REF:0000033 IBA PANTHER:PTN000599579|TAIR:locus:1005716878|FB:FBgn0028833|dictyBase:DDB_G0287495|RGD:1310116 F Uridylate kinase UniProtKB:P15700|PTN000599656 protein taxon:559292 20250327 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0009972) --
SGD S000004235 CDD1 involved_in GO:0009972 GO_REF:0000033 IBA PANTHER:PTN000182087|UniProtKB:P32320|RGD:1311101|UniProtKB:P9WPH3|TAIR:locus:2050429|UniProtKB:P0ABF6 P Cytidine deaminase UniProtKB:Q06549|PTN000182142 protein taxon:559292 20200929 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0009972) --
SGD S000001187 DCD1 involved_in GO:0009972 GO_REF:0000033 IBA PANTHER:PTN008316029|UniProtKB:Q9BWV3 P Deoxycytidylate deaminase UniProtKB:P06773|PTN000119586 protein taxon:559292 20231128 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000006102 CTI6 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN000407064|SGD:S000006102 F Histone deacetylase complex subunit CTI6 UniProtKB:Q08923|PTN002312312 protein taxon:559292 20180419 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000000516 SGF29 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN000488952|SGD:S000000516|PomBase:SPBC1921.07c|dictyBase:DDB_G0272054 F SAGA-associated factor 29 UniProtKB:P25554|PTN001089618 protein taxon:559292 20250327 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000005041 PHO23 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN000035902|SGD:S000001132|SGD:S000005041|TAIR:locus:2020063 F Transcriptional regulatory protein PHO23 UniProtKB:P50947|PTN000036079 protein taxon:559292 20250326 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000003641 SET4 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN001439171|SGD:S000001737|FB:FBgn0036398 F SET domain-containing protein 4 UniProtKB:P42948|PTN002339315 protein taxon:559292 20250328 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000001132 YNG2 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN000035902|SGD:S000001132|SGD:S000005041|TAIR:locus:2020063 F Chromatin modification-related protein YNG2 UniProtKB:P38806|PTN000036085 protein taxon:559292 20250326 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000001737 SET3 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN001439171|SGD:S000001737|FB:FBgn0036398 F SET domain-containing protein 3 UniProtKB:P36124|PTN002312307 protein taxon:559292 20250328 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035064) --
SGD S000006059 SPP1 enables GO:0035064 GO_REF:0000033 IBA PANTHER:PTN005285390|SGD:S000006059|MGI:MGI:1921572 F COMPASS component SPP1 UniProtKB:Q03012|PTN000268593 protein taxon:559292 20220331 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004033) --
SGD S000006331 YPR127W enables GO:0004033 GO_REF:0000033 IBA PANTHER:PTN000199659|PomBase:SPAC9E9.11|UniProtKB:P25906|TAIR:locus:2168601|UniProtKB:O95154|RGD:628635|RGD:620311 F Putative pyridoxal reductase UniProtKB:Q06494|PTN000199665 protein taxon:559292 20250327 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004108) --
SGD S000006205 CIT3 enables GO:0004108 GO_REF:0000033 IBA PANTHER:PTN000201223|PomBase:SPAC6C3.04|TAIR:locus:2098989|dictyBase:DDB_G0267426|UniProtKB:P31660|FB:FBgn0261955|TAIR:locus:2050554|SGD:S000006205|RGD:620330|SGD:S000005284|TAIR:locus:2052379|MGI:MGI:88529|UniProtKB:O75390|UniProtKB:Q9TEM3|SGD:S000000598|UniProtKB:O00098 F Citrate synthase 3, mitochondrial UniProtKB:P43635|PTN000201266 protein taxon:559292 20230110 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004108) --
SGD S000000598 CIT2 enables GO:0004108 GO_REF:0000033 IBA PANTHER:PTN000201223|PomBase:SPAC6C3.04|TAIR:locus:2098989|dictyBase:DDB_G0267426|UniProtKB:P31660|FB:FBgn0261955|TAIR:locus:2050554|SGD:S000006205|RGD:620330|SGD:S000005284|TAIR:locus:2052379|MGI:MGI:88529|UniProtKB:O75390|UniProtKB:Q9TEM3|SGD:S000000598|UniProtKB:O00098 F Citrate synthase, peroxisomal UniProtKB:P08679|PTN000201270 protein taxon:559292 20230110 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004108) --
SGD S000005284 CIT1 enables GO:0004108 GO_REF:0000033 IBA PANTHER:PTN000201223|PomBase:SPAC6C3.04|TAIR:locus:2098989|dictyBase:DDB_G0267426|UniProtKB:P31660|FB:FBgn0261955|TAIR:locus:2050554|SGD:S000006205|RGD:620330|SGD:S000005284|TAIR:locus:2052379|MGI:MGI:88529|UniProtKB:O75390|UniProtKB:Q9TEM3|SGD:S000000598|UniProtKB:O00098 F Citrate synthase, mitochondrial UniProtKB:P00890|PTN000201271 protein taxon:559292 20230110 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019547) --
SGD S000006032 CAR1 involved_in GO:0019547 GO_REF:0000033 IBA PANTHER:PTN000144386|UniProtKB:C4LSS0|RGD:2151|SGD:S000006032|RGD:2150 P Arginase UniProtKB:P00812|PTN000144462 protein taxon:559292 20250328 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000000905 SSA4 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Heat shock protein SSA4 UniProtKB:P22202|PTN000453243 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000000171 SSA3 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Heat shock protein SSA3 UniProtKB:P09435|PTN000453244 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000005546 HSP10 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000080668|UniProtKB:P0A6F9 P 10 kDa heat shock protein, mitochondrial UniProtKB:P38910|PTN000080737 protein taxon:559292 20170228 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000001878 MDJ1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN002454318|TAIR:locus:2162692|UniProtKB:P36659|UniProtKB:P08622 P DnaJ homolog 1, mitochondrial UniProtKB:P35191|PTN001180569 protein taxon:559292 20231109 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000003949 HSP104 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN007521008|SGD:S000003949 P Heat shock protein 104 UniProtKB:P31539|PTN000181277 protein taxon:559292 20250326 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000002388 SSB1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Ribosome-associated molecular chaperone SSB1 UniProtKB:P11484|PTN000453236 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000003806 SSC1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Import motor subunit, mitochondrial UniProtKB:P0CS90|PTN000452611 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000004361 SSQ1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Iron-sulfur cluster biogenesis chaperone, mitochondrial UniProtKB:Q05931|PTN000452606 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000003698 JJJ2 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN002454318|TAIR:locus:2162692|UniProtKB:P36659|UniProtKB:P08622 P J protein JJJ2 UniProtKB:P46997|PTN002376413 protein taxon:559292 20231109 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000004952 SIS1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN001180662|UniProtKB:P25685|MGI:MGI:1931874 P Protein SIS1 UniProtKB:P25294|PTN001181108 protein taxon:559292 20171201 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000000004 SSA1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Heat shock protein SSA1 UniProtKB:P10591|PTN000453248 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000003947 SSA2 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Heat shock protein SSA2 UniProtKB:P10592|PTN000453249 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000000756 ECM10 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Heat shock protein SSC3, mitochondrial UniProtKB:P39987|PTN000452610 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000003571 KAR2 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Endoplasmic reticulum chaperone BiP UniProtKB:P16474|PTN000452762 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000001106 SSZ1 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Ribosome-associated complex subunit SSZ1 UniProtKB:P38788|PTN000453341 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
SGD S000005153 SSB2 involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Ribosome-associated molecular chaperone SSB2 UniProtKB:P40150|PTN000453235 protein taxon:559292 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
SGD S000005561 SHE4 involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN002339981|WB:WBGene00006781|FB:FBgn0288846|MGI:MGI:2142246|MGI:MGI:2443377 P SWI5-dependent HO expression protein 4 UniProtKB:P51534|PTN005270311 protein taxon:559292 20240801 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070577) --
SGD S000002228 BDF2 enables GO:0070577 GO_REF:0000033 IBA PANTHER:PTN000524852|SGD:S000004391|MGI:MGI:99495|WB:WBGene00022473|SGD:S000002228|UniProtKB:Q5A4W8|MGI:MGI:1888520|MGI:MGI:1891374 F Bromodomain-containing factor 2 UniProtKB:Q07442|PTN000524786 protein taxon:559292 20241120 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070577) --
SGD S000004391 BDF1 enables GO:0070577 GO_REF:0000033 IBA PANTHER:PTN000524852|SGD:S000004391|MGI:MGI:99495|WB:WBGene00022473|SGD:S000002228|UniProtKB:Q5A4W8|MGI:MGI:1888520|MGI:MGI:1891374 F Bromodomain-containing factor 1 UniProtKB:P35817|PTN000524787 protein taxon:559292 20241120 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070577) --
SGD S000001887 BLM10 enables GO:0070577 GO_REF:0000033 IBA PANTHER:PTN000793560|MGI:MGI:2143994 F Proteasome activator BLM10 UniProtKB:P43583|PTN000793578 protein taxon:559292 20170228 GO_Central
gorule-0000022
Check for, and filter, annotations made to retracted publications
gorule-0000028
GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect
gorule-0000029
IEAs should be less than one year old.
gorule-0000030
Obsolete GO_REFs are not allowed
gorule-0000037
IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference
gorule-0000039
Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants
gorule-0000042
Qualifier: IKR evidence code requires a NOT qualifier
gorule-0000043
Check for valid combination of evidence code and GO_REF
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
Messages
- WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms --
SGD S000003863 VPS25 enables GO:0042803 GO_REF:0000033 IBA PANTHER:PTN000322234|UniProtKB:Q9BRG1 F Vacuolar protein-sorting-associated protein 25 UniProtKB:P47142|PTN000322275 protein taxon:559292 20170228 GO_Central
gorule-0000050
Annotations to ISS, ISA and ISO should not be self-referential
gorule-0000055
References should have only one ID per ID space
gorule-0000058
Object extensions should conform to the extensions-patterns.yaml file in metadata
gorule-0000061
Allowed gene product to term relations (gp2term)
gorule-0000063
Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)
gorule-0000064
TreeGrafter IEAs should be filtered for GO reference species
gorule-0000065
Annotations to term that are candidates for obsoletion should be removed
Messages
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000001347 KTR7 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase KTR7 UniProtKB:P40504|PTN000779397 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000005974 KTR6 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Mannosyltransferase KTR6 UniProtKB:P54070|PTN000779420 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000003675 YUR1 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase YUR1 UniProtKB:P26725|PTN000779425 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000004974 KTR5 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase KTR5 UniProtKB:P53966|PTN000779398 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000005625 KTR1 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Alpha-1,2 mannosyltransferase KTR1 UniProtKB:P27810|PTN000779431 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000000403 KTR4 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase KTR4 UniProtKB:P38131|PTN000779411 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000001769 KTR2 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase KTR2 UniProtKB:P33550|PTN000779426 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000000409 KTR3 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Probable mannosyltransferase KTR3 UniProtKB:P38130|PTN000779430 protein taxon:559292 20241120 GO_Central
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
SGD S000002891 KRE2 involved_in GO:0097502 GO_REF:0000033 IBA PANTHER:PTN001579360|PomBase:SPBC19C7.12c P Glycolipid 2-alpha-mannosyltransferase UniProtKB:P27809|PTN000779421 protein taxon:559292 20241120 GO_Central
other
GO:0071934 thiamine transmembrane transport AnnotationPropagation P GO:0015234 thiamine transmembrane transporter activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1903712 cysteine transmembrane transport AnnotationPropagation P GO:0033229 cysteine transmembrane transporter activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002196 Ser-tRNA(Ala) deacylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0000007 low-affinity zinc ion transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 AMP kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0140331 aminophospholipid translocation AnnotationPropagation P GO:0015247 aminophospholipid flippase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006672 ceramide metabolic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019150 D-ribulokinase activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0008645 hexose transmembrane transport AnnotationPropagation P GO:0015149 hexose transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1990570 GDP-mannose transmembrane transport AnnotationPropagation P GO:0005458 GDP-mannose transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0006415 translational termination AnnotationPropagation P GO:0003747 translation release factor activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0089722 phosphoenolpyruvate transmembrane transport AnnotationPropagation P GO:0089721 phosphoenolpyruvate transmembrane transporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006673 inositol phosphoceramide metabolic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070126 mitochondrial translational termination IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046972 histone H4K16 acetyltransferase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0032527 protein exit from endoplasmic reticulum IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0099116 tRNA 5'-end processing AnnotationPropagation P GO:0008193 tRNA guanylyltransferase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0000316 sulfite transmembrane transport AnnotationPropagation P GO:0000319 sulfite transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0043998 histone H2A acetyltransferase activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:1990259 histone H2A Q104 methyltransferase activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0051864 histone H3K36 demethylase activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0015217 ADP transmembrane transporter activity IBA
GO:0015866 ADP transport AnnotationPropagation P GO:0015217 ADP transmembrane transporter activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 AMP kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0009107 lipoate biosynthetic process AnnotationPropagation P GO:0016992 lipoate synthase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0097020 COPII receptor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0072354 histone H3T3 kinase activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0035445 borate transmembrane transport AnnotationPropagation P GO:0080139 borate efflux transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0017121 plasma membrane phospholipid scrambling AnnotationPropagation P GO:0017128 phospholipid scramblase activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1903710 spermine transmembrane transport AnnotationPropagation P GO:0000297 spermine transmembrane transporter activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046521 sphingoid catabolic process IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008553 P-type proton-exporting transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA
GO:0015741 fumarate transport AnnotationPropagation P GO:0005469 succinate:fumarate antiporter activity IBA
GO:0071422 succinate transmembrane transport AnnotationPropagation P GO:0005469 succinate:fumarate antiporter activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0046514 ceramide catabolic process IBA
GO:0070574 cadmium ion transmembrane transport AnnotationPropagation P GO:0008551 P-type cadmium transporter activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016433 rRNA (adenine) methyltransferase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0036261 7-methylguanosine cap hypermethylation AnnotationPropagation P GO:0071164 RNA cap trimethylguanosine synthase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005436 sodium:phosphate symporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005436 sodium:phosphate symporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0043682 P-type divalent copper transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:1990569 UDP-N-acetylglucosamine transmembrane transport AnnotationPropagation P GO:0005462 UDP-N-acetylglucosamine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0006278 RNA-templated DNA biosynthetic process AnnotationPropagation P GO:0003720 telomerase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:1903401 L-lysine transmembrane transport AnnotationPropagation P GO:0015189 L-lysine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015189 L-lysine transmembrane transporter activity IBA
GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015706 nitrate transmembrane transport AnnotationPropagation P GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0015369 calcium:proton antiporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015369 calcium:proton antiporter activity IBA
GO:0015887 pantothenate transmembrane transport AnnotationPropagation P GO:0015233 pantothenate transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0034498 early endosome to Golgi transport IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0030970 retrograde protein transport, ER to cytosol IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0005381 iron ion transmembrane transporter activity IBA