Group: paint - Dataset: paint_japonicusdb
SUMMARY
This report generated on 2025-10-04
- Associations: 11817
- Lines in file (incl headers): 11843
- Lines skipped: 20
!gaf-version: 2.2
!Created on Wed Oct 1 17:40:01 2025.
!generated-by: PANTHER
!date-generated: 2025-10-01
!PANTHER version: v.19.0.
!GO version: 2025-07-22.
Contents
gorule-0000002
gorule-0000005
gorule-0000006
gorule-0000007
gorule-0000008
gorule-0000011
gorule-0000013
gorule-0000015
gorule-0000016
gorule-0000017
gorule-0000018
gorule-0000020
gorule-0000022
gorule-0000027
gorule-0000028
gorule-0000029
gorule-0000030
gorule-0000037
gorule-0000039
gorule-0000042
gorule-0000043
gorule-0000046
gorule-0000050
gorule-0000055
gorule-0000058
gorule-0000061
gorule-0000063
gorule-0000064
gorule-0000065
other
MESSAGES
gorule-0000002
No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'
gorule-0000005
IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
gorule-0000007
IPI should not be used with GO:0003824 catalytic activity or descendents
gorule-0000008
No annotations should be made to uninformative high level terms
Messages
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_02289 SJAG_02289 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000127900|SGD:S000005269|RGD:1311375|UniProtKB:Q92562|TAIR:locus:2009477 C Inositol polyphosphate phosphatase UniProtKB:B6K225|PTN008696946 protein taxon:402676 20250904 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_02176 SJAG_02176 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000601050|UniProtKB:Q16798 P Malic enzyme UniProtKB:B6K1R4|PTN008598821 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_05296 SJAG_05296 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000571055|UniProtKB:Q27974|UniProtKB:O14976|SGD:S000002728 C UBA_TPR_DNAJ domain-containing protein Ucp7 UniProtKB:B6K3T3|PTN008592598 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03726 SJAG_03726 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|dictyBase:DDB_G0289721|RGD:1311115|SGD:S000004160|TAIR:locus:2051905|MGI:MGI:2141861|SGD:S000003819|PomBase:SPAP27G11.06c|UniProtKB:P56377|FB:FBgn0043012|UniProtKB:P61966|FB:FBgn0039132|RGD:620188 C AP complex subunit sigma UniProtKB:B6K2S8|PTN008526055 protein taxon:402676 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_04221 SJAG_04221 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000512111|MGI:MGI:2142610|UniProtKB:Q9Y5W7|MGI:MGI:1921581|UniProtKB:Q9Y5W8|FB:FBgn0029976 C Sorting nexin Snx12 UniProtKB:B6K693|PTN008581850 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_00296 SJAG_00296 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN001128334|PomBase:SPAC18B11.04|SGD:S000002781 C Neuronal calcium sensor Ncs1-like protein UniProtKB:B6JV89|PTN008588986 protein taxon:402676 20240206 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_04217 SJAG_04217 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000451724|RGD:620558|RGD:621551|UniProtKB:Q385A5|UniProtKB:Q382H2|SGD:S000005055|UniProtKB:Q8I599|MGI:MGI:1926952|TAIR:locus:2028721 C Cytochrome b5 UniProtKB:B6K689|PTN008570220 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_01177 SJAG_01177 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000322073|UniProtKB:Q8N357|FB:FBgn0260744|MGI:MGI:1922169 C NST UDP-galactose transporter UniProtKB:B6JZY8|PTN008546305 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_02805 SJAG_02805 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|dictyBase:DDB_G0289721|RGD:1311115|SGD:S000004160|TAIR:locus:2051905|MGI:MGI:2141861|SGD:S000003819|PomBase:SPAP27G11.06c|UniProtKB:P56377|FB:FBgn0043012|UniProtKB:P61966|FB:FBgn0039132|RGD:620188 C AP complex subunit sigma UniProtKB:B6K182|PTN008526088 protein taxon:402676 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_00379 SJAG_00379 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000204281|dictyBase:DDB_G0289721|RGD:1311115|SGD:S000004160|TAIR:locus:2051905|MGI:MGI:2141861|SGD:S000003819|PomBase:SPAP27G11.06c|UniProtKB:P56377|FB:FBgn0043012|UniProtKB:P61966|FB:FBgn0039132|RGD:620188 C AP complex subunit sigma UniProtKB:B6JVG8|PTN008526072 protein taxon:402676 20250902 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_02429 SJAG_02429 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000270644|FB:FBgn0052484|dictyBase:DDB_G0272522|TAIR:locus:6530298214|SGD:S000003590|UniProtKB:Q53H12|MGI:MGI:1316649|UniProtKB:Q9NYA1|TAIR:locus:2119642|SGD:S000005697|MGI:MGI:1861380|WB:WBGene00007918|SGD:S000004250|UniProtKB:Q9NRA0|RGD:620048 C Sphingoid long chain base kinase UniProtKB:B6K2G0|PTN008536846 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_02736 SJAG_02736 involved_in GO:0000910 GO_REF:0000033 IBA PANTHER:PTN008614896|dictyBase:DDB_G0284839|PomBase:SPAC24B11.11c|SGD:S000006315 P AGC_NDR protein kinase Mug27 UniProtKB:B6K117|PTN008614898 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_04597 SJAG_04597 involved_in GO:0000910 GO_REF:0000033 IBA PANTHER:PTN008614896|dictyBase:DDB_G0284839|PomBase:SPAC24B11.11c|SGD:S000006315 P AGC_NDR protein kinase Sid2 UniProtKB:B6K790|PTN008614900 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03238 SJAG_03238 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000116700|UniProtKB:O43447|PomBase:SPBC1709.04c C Peptidyl-prolyl cis-trans isomerase UniProtKB:B6K3P8|PTN008511856 protein taxon:402676 20210904 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03929 SJAG_03929 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000451724|RGD:620558|RGD:621551|UniProtKB:Q385A5|UniProtKB:Q382H2|SGD:S000005055|UniProtKB:Q8I599|MGI:MGI:1926952|TAIR:locus:2028721 C Cytochrome b5 UniProtKB:B6K5F4|PTN008570218 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03315 SJAG_03315 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000337666|UniProtKB:Q9BTX3|UniProtKB:Q38FE8|FB:FBgn0034059 C DUF788 family protein UniProtKB:B6K3X0|PTN008549430 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03849 SJAG_03849 involved_in GO:0036211 GO_REF:0000033 IBA PANTHER:PTN000315756|SGD:S000007251 P Ubiquitin-like modifier HUB1 UniProtKB:B6K580|PTN008545261 protein taxon:402676 20240205 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_03290 SJAG_03290 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|RGD:735073|UniProtKB:Q8IAZ6|UniProtKB:P09622|MGI:MGI:107450 P Dihydrolipoyl dehydrogenase UniProtKB:B6K3U9|PTN008584410 protein taxon:402676 20250903 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_04352 SJAG_04352 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN002253524|UniProtKB:Q13427|dictyBase:DDB_G0269120|FB:FBgn0039581|WB:WBGene00000884|RGD:620315|dictyBase:DDB_G0280401|UniProtKB:Q9UNP9 C Cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2 UniProtKB:B6K6L7|PTN008511714 protein taxon:402676 20240918 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
JaponicusDB SJAG_01400 SJAG_01400 is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000642960|UniProtKB:P23634|TAIR:locus:2120096|SGD:S000002974|UniProtKB:P20020|PomBase:SPAPB2B4.04c|TAIR:locus:2082528|MGI:MGI:104653|MGI:MGI:105368|UniProtKB:Q57VN6|dictyBase:DDB_G0277861|TAIR:locus:2029794|TAIR:locus:2062673 C Calcium-transporting ATPase UniProtKB:B6JXT6|PTN008605574 protein taxon:402676 20250903 GO_Central
gorule-0000011
ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND
gorule-0000013
Taxon-appropriate annotation check
Messages
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02831 SJAG_02831 is_active_in GO:0030018 GO_REF:0000033 IBA PANTHER:PTN000654055|MGI:MGI:1341092|RGD:61963|MGI:MGI:1338762 C Paxillin-like protein Pxl1 UniProtKB:B6K1A6|PTN008609049 protein taxon:402676 20170427 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02810 SJAG_02810 part_of GO:0033309 GO_REF:0000033 IBA PANTHER:PTN000917496|SGD:S000004172|SGD:S000000913 C MBF transcription factor complex subunit Cdc10 UniProtKB:B6K188|PTN008685717 protein taxon:402676 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02838 SJAG_02838 enables GO:0050321 GO_REF:0000033 IBA PANTHER:PTN000680111|FB:FBgn0260934|UniProtKB:P27448|RGD:708483|UniProtKB:Q96L34|UniProtKB:Q7KZI7 F non-specific serine_threonine protein kinase UniProtKB:B6K1B3|PTN008613922 protein taxon:402676 20250903 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_04001 SJAG_04001 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:P47807|UniProtKB:Q9UBC5|UniProtKB:O00159|MGI:MGI:1927091|MGI:MGI:107732 C Myosin type I UniProtKB:B6K5M5|PTN008546170 protein taxon:402676 20240205 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_04785 SJAG_04785 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|RGD:728909|UniProtKB:Q8NBP7|MGI:MGI:2140260 C Serine protease Psp3 UniProtKB:B6K7R9|PTN008685495 protein taxon:402676 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_00451 SJAG_00451 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000194073|UniProtKB:P15085|UniProtKB:Q9UI42|RGD:71035 C Carboxypeptidase UniProtKB:B6JVN6|PTN008524568 protein taxon:402676 20240729 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_00987 SJAG_00987 part_of GO:0033309 GO_REF:0000033 IBA PANTHER:PTN000917496|SGD:S000004172|SGD:S000000913 C MBF transcription factor complex subunit Res2 UniProtKB:B6JX59|PTN008685711 protein taxon:402676 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_04943 SJAG_04943 involved_in GO:0031578 GO_REF:0000033 IBA PANTHER:PTN002172173|SGD:S000003814 P Two-component GAP Byr4 (Fragment) UniProtKB:B6K866|PTN009154981 protein taxon:402676 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_00732 SJAG_00732 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN000096378|UniProtKB:Q15582|MGI:MGI:99959|RGD:1305285 C Fasciclin domain-containing protein UniProtKB:B6JWF6|PTN008508371 protein taxon:402676 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02817 SJAG_02817 involved_in GO:0034587 GO_REF:0000033 IBA PANTHER:PTN000483941|FB:FBgn0033686|MGI:MGI:1913965|ZFIN:ZDB-GENE-050417-387|WB:WBGene00015349 P Small RNA 2'-O-methyltransferase UniProtKB:B6K194|PTN008576472 protein taxon:402676 20231109 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02432 SJAG_02432 is_active_in GO:0005615 GO_REF:0000033 IBA PANTHER:PTN002465725|RGD:728909|UniProtKB:Q8NBP7|MGI:MGI:2140260 C Vacuolar serine protease Isp6 UniProtKB:B6K2G3|PTN008685497 protein taxon:402676 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_03072 SJAG_03072 is_active_in GO:0045335 GO_REF:0000033 IBA PANTHER:PTN000635769|UniProtKB:P51151|FB:FBgn0015795|MGI:MGI:2442295|UniProtKB:P51149|UniProtKB:Q9NP90|WB:WBGene00004271|dictyBase:DDB_G0269236|UniProtKB:Q96AH8 C GTPase Ypt71 UniProtKB:B6K390|PTN008725327 protein taxon:402676 20250413 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_02396 SJAG_02396 is_active_in GO:0055120 GO_REF:0000033 IBA PANTHER:PTN000309119|WB:WBGene00014177 C FRG1 family protein UniProtKB:B6K2C8|PTN008544209 protein taxon:402676 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_03602 SJAG_03602 enables GO:0050321 GO_REF:0000033 IBA PANTHER:PTN000680111|FB:FBgn0260934|UniProtKB:P27448|RGD:708483|UniProtKB:Q96L34|UniProtKB:Q7KZI7 F non-specific serine_threonine protein kinase UniProtKB:B6K4P0|PTN008613927 protein taxon:402676 20250903 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_01958 SJAG_01958 enables GO:0052907 GO_REF:0000033 IBA PANTHER:PTN000333539|UniProtKB:P75782 F U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase UniProtKB:B6JZC9|PTN008548666 protein taxon:402676 20170228 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_00693 SJAG_00693 part_of GO:0033309 GO_REF:0000033 IBA PANTHER:PTN000917496|SGD:S000004172|SGD:S000000913 C MBF transcription factor complex subunit Res1 UniProtKB:B6JWB9|PTN008685713 protein taxon:402676 20181004 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_04469 SJAG_04469 enables GO:0050321 GO_REF:0000033 IBA PANTHER:PTN000680111|FB:FBgn0260934|UniProtKB:P27448|RGD:708483|UniProtKB:Q96L34|UniProtKB:Q7KZI7 F HAL protein kinase Ppk24 UniProtKB:B6K6W9|PTN008613926 protein taxon:402676 20250903 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_03137 SJAG_03137 is_active_in GO:0045335 GO_REF:0000033 IBA PANTHER:PTN000635769|UniProtKB:P51151|FB:FBgn0015795|MGI:MGI:2442295|UniProtKB:P51149|UniProtKB:Q9NP90|WB:WBGene00004271|dictyBase:DDB_G0269236|UniProtKB:Q96AH8 C GTPase Ypt7 UniProtKB:B6K3F3|PTN008725329 protein taxon:402676 20250413 GO_Central
- ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check --
JaponicusDB SJAG_04018 SJAG_04018 involved_in GO:0045540 GO_REF:0000033 IBA PANTHER:PTN001648672|UniProtKB:Q12770|MGI:MGI:2135958 P Sterol regulatory element-binding protein cleavage-activating protein UniProtKB:B6K5P2|PTN008707778 protein taxon:402676 20220331 GO_Central
gorule-0000015
Dual species taxon check
gorule-0000016
With/From: IC annotations require a With/From GO ID
gorule-0000017
IDA annotations must not have a With/From entry
gorule-0000018
IPI annotations require a With/From entry
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
Messages
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0019933) --
JaponicusDB SJAG_01754 SJAG_01754 involved_in GO:0019933 GO_REF:0000033 IBA PANTHER:PTN000068843|CGD:CAL0000183073 P Adenylyl cyclase-associated protein UniProtKB:B6JYT5|PTN008502967 protein taxon:402676 20210226 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
JaponicusDB SJAG_02102 SJAG_02102 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000315506|TAIR:locus:2017963 P Chitobiosyldiphosphodolichol beta-mannosyltransferase UniProtKB:B6JZQ7|PTN008545154 protein taxon:402676 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
JaponicusDB SJAG_00554 SJAG_00554 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000488276|SGD:S000002352 P ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyldiphosphate specific] UniProtKB:B6JVY9|PTN008577297 protein taxon:402676 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
JaponicusDB SJAG_03188 SJAG_03188 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000500861|ZFIN:ZDB-GENE-040801-234|SGD:S000002213 P mannose-1-phosphate guanylyltransferase UniProtKB:B6K3K0|PTN008579830 protein taxon:402676 20210604 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
JaponicusDB SJAG_04952 SJAG_04952 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000291297|SGD:S000000178|TAIR:locus:2043343 P Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase UniProtKB:B6K873|PTN008541186 protein taxon:402676 20250903 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006486) --
JaponicusDB SJAG_02163 SJAG_02163 involved_in GO:0006486 GO_REF:0000033 IBA PANTHER:PTN000815984|SGD:S000004707|SGD:S000000206 P Alkyl transferase UniProtKB:B6K1Q2|PTN008497199 protein taxon:402676 20180916 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006529) --
JaponicusDB SJAG_04549 SJAG_04549 involved_in GO:0006529 GO_REF:0000033 IBA PANTHER:PTN000206334|RGD:2162|TAIR:locus:2099580|UniProtKB:P08243|SGD:S000003356|SGD:S000006349|PomBase:SPBC119.10|UniProtKB:P22106 P Asparagine synthetase UniProtKB:B6K745|PTN008526514 protein taxon:402676 20250902 GO_Central
gorule-0000022
Check for, and filter, annotations made to retracted publications
gorule-0000027
Each identifier in GAF is valid
Messages
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
JaponicusDB SJAG_03263 SJAG_03263 involved_in GO:0043409 GO_REF:0000033 IBA PANTHER:PTN001605855|RGD:70978|ZFIN:ZDB-GENE-040801-188|UniProtKB:P28562|MGI:MGI:2387107|dictyBase:DDB_G0269918|RGD:620897|UniProtKB:Q16829|MGI:MGI:105120|UniProtKB:Q9BY84|ZFIN:ZDB-GENE-030613-1|UniProtKB:Q16828|SGD:S000004998|WB:WBGene00006923|ZFIN:ZDB-GENE-040426-709|MGI:MGI:1927070|UniProtKB:Q9Y6W6|PomBase:SPBC1685.01|UniProtKB:Q13115|UniProtKB:Q91790|RGD:150342989|FB:FBgn0036844 P Dual-specificity MAP kinase phosphatase Pmp1 UniProtKB:B6K3S2|PTN008494696 protein taxon:402676 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150340783 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150340783) --
JaponicusDB SJAG_04414 SJAG_04414 part_of GO:0022625 GO_REF:0000033 IBA PANTHER:PTN000096770|MGI:MGI:1928894|RGD:150340783|UniProtKB:P18077|SGD:S000005760|SGD:S000006064|PomBase:SPBC1921.01c|RGD:628793 C 60S ribosomal protein L35a UniProtKB:B6K6S6|PTN008508396 protein taxon:402676 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150342989 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150342989) --
JaponicusDB SJAG_03263 SJAG_03263 involved_in GO:0007165 GO_REF:0000033 IBA PANTHER:PTN004128558|RGD:620897|RGD:150342989|SGD:S000004998|WB:WBGene00003043|SGD:S000001375|FB:FBgn0243512 P Dual-specificity MAP kinase phosphatase Pmp1 UniProtKB:B6K3S2|PTN008494696 protein taxon:402676 20250902 GO_Central
- WARNING - Invalid identifier: GORULE:0000027: 150340783 does not match any id_syntax patterns for RGD in dbxrefs (RGD:150340783) --
JaponicusDB SJAG_00166 SJAG_00166 part_of GO:0022625 GO_REF:0000033 IBA PANTHER:PTN000096770|MGI:MGI:1928894|RGD:150340783|UniProtKB:P18077|SGD:S000005760|SGD:S000006064|PomBase:SPBC1921.01c|RGD:628793 C 60S ribosomal protein L35a UniProtKB:B6JXM6|PTN008508397 protein taxon:402676 20250902 GO_Central
gorule-0000028
GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect
gorule-0000029
IEAs should be less than one year old.
gorule-0000030
Obsolete GO_REFs are not allowed
gorule-0000037
IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference
gorule-0000039
Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants
gorule-0000042
Qualifier: IKR evidence code requires a NOT qualifier
gorule-0000043
Check for valid combination of evidence code and GO_REF
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
Messages
- WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms --
JaponicusDB SJAG_04912 SJAG_04912 enables GO:0042803 GO_REF:0000033 IBA PANTHER:PTN000322234|UniProtKB:Q9BRG1 F ESCRT II complex subunit Vps25 UniProtKB:B6K836|PTN008546331 protein taxon:402676 20170228 GO_Central
gorule-0000050
Annotations to ISS, ISA and ISO should not be self-referential
gorule-0000055
References should have only one ID per ID space
gorule-0000058
Object extensions should conform to the extensions-patterns.yaml file in metadata
gorule-0000061
Allowed gene product to term relations (gp2term)
gorule-0000063
Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)
gorule-0000064
TreeGrafter IEAs should be filtered for GO reference species
gorule-0000065
Annotations to term that are candidates for obsoletion should be produce a warning
other
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 histone deacetylase activity, NAD-dependent IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0072334 UDP-galactose transmembrane transport AnnotationPropagation P GO:0005459 UDP-galactose transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0035269 protein O-linked glycosylation via mannose AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0015825 L-serine transport AnnotationPropagation P GO:0015194 L-serine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015194 L-serine transmembrane transporter activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0005078 MAP-kinase scaffold activity IBA
GO:1901962 S-adenosyl-L-methionine transmembrane transport AnnotationPropagation P GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0140331 aminophospholipid translocation AnnotationPropagation P GO:0015247 aminophospholipid flippase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004747 ribokinase activity IBA
GO:0010498 proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0140107 high-affinity potassium ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000957 mitochondrial RNA catabolic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042054 histone methyltransferase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:1903710 spermine transmembrane transport AnnotationPropagation P GO:0000297 spermine transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0005345 purine nucleobase transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046512 sphingosine biosynthetic process IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006633 fatty acid biosynthetic process AnnotationPropagation P GO:0000036 acyl carrier activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0000375 RNA splicing, via transesterification reactions AnnotationPropagation P GO:0000386 second spliceosomal transesterification activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016433 rRNA (adenine) methyltransferase activity IBA
GO:1903712 cysteine transmembrane transport AnnotationPropagation P GO:0033229 cysteine transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071039 nuclear polyadenylation-dependent CUT catabolic process IBA
GO:0016567 protein ubiquitination AnnotationPropagation P GO:0004839 ubiquitin activating enzyme activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0051864 histone H3K36 demethylase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071031 nuclear mRNA surveillance of mRNA 3'-end processing IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0000139 Golgi membrane AnnotationPropagation C GO:0048194 Golgi vesicle budding IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0016020 membrane AnnotationPropagation C GO:0006665 sphingolipid metabolic process IBA
GO:0071918 urea transmembrane transport AnnotationPropagation P GO:0015204 urea transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042800 histone H3K4 methyltransferase activity IBA
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0072354 histone H3T3 kinase activity IBA
GO:0052699 ergothioneine biosynthetic process AnnotationPropagation P GO:1990411 hercynylcysteine sulfoxide lyase activity (ergothioneine-forming) IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042054 histone methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0010998 regulation of translational initiation by eIF2 alpha phosphorylation AnnotationPropagation P GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002161 aminoacyl-tRNA deacylase activity IBA
GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0000064 L-ornithine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial respiratory chain complex IV assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046975 histone H3K36 methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0046902 regulation of mitochondrial membrane permeability IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0140053 mitochondrial gene expression IBA
GO:0016020 membrane AnnotationPropagation C GO:0006673 inositol phosphoceramide metabolic process IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0015770 sucrose transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032041 histone H3K14 deacetylase activity, NAD-dependent IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006415 translational termination AnnotationPropagation P GO:0003747 translation release factor activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042799 histone H4K20 methyltransferase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0001172 RNA-templated transcription AnnotationPropagation P GO:0003968 RNA-directed RNA polymerase activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000965 mitochondrial RNA 3'-end processing IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0006488 dolichol-linked oligosaccharide biosynthetic process AnnotationPropagation P GO:0042281 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016149 translation release factor activity, codon specific IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0005381 iron ion transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA