Table of contents

Report

Group: paint - Dataset: paint_ecocyc

SUMMARY

This report generated on 2021-09-22

Header From Original Association File

!gaf-version: 2.2
!Created on Wed Sep 8 16:26:55 2021.
!generated-by: PANTHER
!date-generated: 2021-09-08
!PANTHER version: v.15.0.
!GO version: 2021-08-18.

Contents

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other

MESSAGES

gorule-0000002

No 'NOT' annotations to 'protein binding ; GO:0005515'

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

gorule-0000013

Taxon-appropriate annotation check

Messages

gorule-0000015

Dual species taxon check

gorule-0000016

With/From: IC annotations require a With/From GO ID

gorule-0000017

IDA annotations must not have a With/From entry

gorule-0000018

IPI annotations require a With/From entry

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000028

Aspect can only be one of C, P, F and should be repaired using the GO term

gorule-0000029

IEAs should be less than one year old.

gorule-0000030

Deprecated GO_REFs are not allowed

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have PMID:21873635 as a reference

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

gorule-0000043

Check for valid combination of evidence code and GO_REF

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms.

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

gorule-0000055

References should have only one ID per ID space

gorule-0000057

Group specific filter rules should be applied to annotations

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

gorule-0000061

Allowed gene product to term relations (gp2term)

other

Predictions

GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0009086 methionine biosynthetic process AnnotationPropagation P GO:0008705 methionine synthase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0008233 peptidase activity IBA
GO:0045893 positive regulation of transcription, DNA-templated AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity IBA
GO:1904659 glucose transmembrane transport AnnotationPropagation P GO:0005412 glucose:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005412 glucose:sodium symporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008254 3'-nucleotidase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0045892 negative regulation of transcription, DNA-templated AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004674 protein serine/threonine kinase activity IBA
GO:0015986 ATP synthesis coupled proton transport AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:0015836 lipid-linked peptidoglycan transport AnnotationPropagation P GO:0015648 lipid-linked peptidoglycan transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015648 lipid-linked peptidoglycan transporter activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0015807 L-amino acid transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0008233 peptidase activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035335 peptidyl-tyrosine dephosphorylation AnnotationPropagation P GO:0004725 protein tyrosine phosphatase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0009165 nucleotide biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:1902603 carnitine transmembrane transport AnnotationPropagation P GO:0015226 carnitine transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004020 adenylylsulfate kinase activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0008324 cation transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008906 inosine kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0042918 alkanesulfonate transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0005298 proline:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005298 proline:sodium symporter activity IBA
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0004713 protein tyrosine kinase activity IBA
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic AnnotationPropagation P GO:0004534 5'-3' exoribonuclease activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008776 acetate kinase activity IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0035873 lactate transmembrane transport AnnotationPropagation P GO:0015129 lactate transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004765 shikimate kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008855 exodeoxyribonuclease VII activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0008855 exodeoxyribonuclease VII activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0032147 activation of protein kinase activity AnnotationPropagation P GO:0030295 protein kinase activator activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0030488 tRNA methylation AnnotationPropagation P GO:0089715 tRNA m6t6A37 methyltransferase activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0009378 four-way junction helicase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0005345 purine nucleobase transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0015856 cytosine transport AnnotationPropagation P GO:0015209 cytosine transmembrane transporter activity IBA
GO:0072531 pyrimidine-containing compound transmembrane transport AnnotationPropagation P GO:0015209 cytosine transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0032147 activation of protein kinase activity AnnotationPropagation P GO:0030295 protein kinase activator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0070574 cadmium ion transmembrane transport AnnotationPropagation P GO:0015086 cadmium ion transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0015767 lactose transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0016805 dipeptidase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015299 solute:proton antiporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic AnnotationPropagation P GO:0004521 endoribonuclease activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0042918 alkanesulfonate transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042959 alkanesulfonate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0009029 tetraacyldisaccharide 4'-kinase activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004672 protein kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0003991 acetylglutamate kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0008237 metallopeptidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004127 cytidylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004127 cytidylate kinase activity IBA
GO:0015807 L-amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0015804 neutral amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0008804 carbamate kinase activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006479 protein methylation AnnotationPropagation P GO:0036009 protein-glutamine N-methyltransferase activity IBA
GO:0035873 lactate transmembrane transport AnnotationPropagation P GO:0015129 lactate transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0071972 peptidoglycan L,D-transpeptidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic AnnotationPropagation P GO:0004523 RNA-DNA hybrid ribonuclease activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:1990238 double-stranded DNA endodeoxyribonuclease activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015658 branched-chain amino acid transmembrane transporter activity IBA
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015658 branched-chain amino acid transmembrane transporter activity IBA
GO:0000451 rRNA 2'-O-methylation AnnotationPropagation P GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004252 serine-type endopeptidase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0046583 cation efflux transmembrane transporter activity IBA
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015736 hexuronate transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015778 hexuronide transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0002953 5'-deoxynucleotidase activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IBA
GO:0006479 protein methylation AnnotationPropagation P GO:0008276 protein methyltransferase activity IBA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0004672 protein kinase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0015666 restriction endodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0015666 restriction endodeoxyribonuclease activity IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IBA
GO:0015861 cytidine transport AnnotationPropagation P GO:0015212 cytidine transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015212 cytidine transmembrane transporter activity IBA
GO:0072531 pyrimidine-containing compound transmembrane transport AnnotationPropagation P GO:0015212 cytidine transmembrane transporter activity IBA
GO:0031564 transcription antitermination AnnotationPropagation P GO:0001072 transcription antitermination factor activity, RNA binding IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0001072 transcription antitermination factor activity, RNA binding IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0005548 phospholipid transporter activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0071972 peptidoglycan L,D-transpeptidase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903401 L-lysine transmembrane transport AnnotationPropagation P GO:0015661 L-lysine efflux transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015661 L-lysine efflux transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0046316 gluconokinase activity IBA
GO:0001510 RNA methylation AnnotationPropagation P GO:0008173 RNA methyltransferase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004371 glycerone kinase activity IBA
GO:0035511 oxidative DNA demethylation AnnotationPropagation P GO:0035516 oxidative DNA demethylase activity IBA
GO:0035335 peptidyl-tyrosine dephosphorylation AnnotationPropagation P GO:0004725 protein tyrosine phosphatase activity IBA
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0046316 gluconokinase activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045892 negative regulation of transcription, DNA-templated AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0006479 protein methylation AnnotationPropagation P GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IBA
GO:0090501 RNA phosphodiester bond hydrolysis AnnotationPropagation P GO:0004540 ribonuclease activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015360 acetate:proton symporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015360 acetate:proton symporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IBA
GO:0097052 L-kynurenine metabolic process AnnotationPropagation P GO:0016212 kynurenine-oxoglutarate transaminase activity IBA
GO:0034220 ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive ion channel activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015091 ferric iron transmembrane transporter activity IBA
GO:0071422 succinate transmembrane transport AnnotationPropagation P GO:0015141 succinate transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0008967 phosphoglycolate phosphatase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045893 positive regulation of transcription, DNA-templated AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0015706 nitrate transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0006761 dihydrofolate biosynthetic process AnnotationPropagation P GO:0008841 dihydrofolate synthase activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0004222 metalloendopeptidase activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0005345 purine nucleobase transmembrane transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic AnnotationPropagation P GO:0000175 3'-5'-exoribonuclease activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008310 single-stranded DNA 3'-5' exodeoxyribonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0008310 single-stranded DNA 3'-5' exodeoxyribonuclease activity IBA
GO:0001510 RNA methylation AnnotationPropagation P GO:0008173 RNA methyltransferase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015144 carbohydrate transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0072337 modified amino acid transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0006835 dicarboxylic acid transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0036307 23S rRNA (adenine(2030)-N(6))-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006508 proteolysis AnnotationPropagation P GO:0016805 dipeptidase activity IBA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0045893 positive regulation of transcription, DNA-templated AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0045893 positive regulation of transcription, DNA-templated AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0043136 glycerol-3-phosphatase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0008408 3'-5' exonuclease activity IBA
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic AnnotationPropagation P GO:0000175 3'-5'-exoribonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IBA
GO:0042939 tripeptide transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IBA
GO:0015700 arsenite transport AnnotationPropagation P GO:0008490 arsenite secondary active transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0008490 arsenite secondary active transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090588 protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity IBA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0016310 phosphorylation AnnotationPropagation P GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity IBA
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015807 L-amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0015804 neutral amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0098655 cation transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0050790 regulation of catalytic activity AnnotationPropagation P GO:0008047 enzyme activator activity IBA
GO:0042886 amide transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA

Predictions (experimental)