• Report (original)
• Predictions (original)
• Predictions (experimental) (original)

Group: paint - Dataset: paint_ecocyc

SUMMARY

This report generated on 2024-08-04

• Associations: 5484
• Lines in file (incl headers): 5494
• Lines skipped: 4

Header From Original Association File

!gaf-version: 2.2
!Created on Fri Aug 2 12:47:18 2024.
!generated-by: PANTHER
!date-generated: 2024-08-02
!PANTHER version: v.17.0.
!GO version: 2024-06-17.

Contents

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other

MESSAGES

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

• total: 0

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 0

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

• total: 0

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

• total: 0

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 1

Messages

• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- UniProtKB P67080 yggS is_active_in GO:0005622 GO_REF:0000033 IBA PANTHER:PTN000015833|UniProtKB:P67080|UniProtKB:Q57VD5|UniProtKB:O94903 C Pyridoxal phosphate homeostasis protein UniProtKB:P67080|PTN000015910 protein taxon:83333 20200929 GO_Central

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

• total: 0

gorule-0000013

Taxon-appropriate annotation check

• total: 0

gorule-0000015

Dual species taxon check

• total: 0

gorule-0000016

With/From: IC annotations require a With/From GO ID

• total: 0

gorule-0000017

IDA annotations must not have a With/From entry

• total: 0

gorule-0000018

IPI annotations require a With/From entry

• total: 0

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 6

Messages

• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0019391) -- UniProtKB P05804 uidA involved_in GO:0019391 GO_REF:0000033 IBA PANTHER:PTN004122708|MGI:MGI:95872|UniProtKB:P05804 P Beta-glucuronidase UniProtKB:P05804|PTN001296252 protein taxon:83333 20190815 GO_Central
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0052665) -- UniProtKB P37005 lasT enables GO:0052665 GO_REF:0000033 IBA PANTHER:PTN000247326|UniProtKB:P0AE01 F Uncharacterized tRNA/rRNA methyltransferase LasT UniProtKB:P37005|PTN000247338 protein taxon:83333 20170228 GO_Central
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0052665) -- UniProtKB P0AE01 trmJ enables GO:0052665 GO_REF:0000033 IBA PANTHER:PTN000247326|UniProtKB:P0AE01 F tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ UniProtKB:P0AE01|PTN000947742 protein taxon:83333 20170228 GO_Central
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0052665) -- UniProtKB P0AGJ7 trmL enables GO:0052665 GO_REF:0000033 IBA PANTHER:PTN000247318|UniProtKB:P0AGJ7 F tRNA (cytidine(34)-2'-O)-methyltransferase UniProtKB:P0AGJ7|PTN000947666 protein taxon:83333 20230720 GO_Central
• WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004024) -- UniProtKB P25437 frmA enables GO:0004024 GO_REF:0000033 IBA PANTHER:PTN000191653|MGI:MGI:1349472|UniProtKB:P07327|UniProtKB:P25437|UniProtKB:P00325|UniProtKB:P08319|UniProtKB:P40394 F S-(hydroxymethyl)glutathione dehydrogenase UniProtKB:P25437|PTN000914946 protein taxon:83333 20181004 GO_Central
• WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0019516) -- UniProtKB P06149 dld involved_in GO:0019516 GO_REF:0000033 IBA PANTHER:PTN000202405|UniProtKB:P06149 P Quinone-dependent D-lactate dehydrogenase UniProtKB:P06149|PTN001367983 protein taxon:83333 20170228 GO_Central

gorule-0000022

Check for, and filter, annotations made to retracted publications

• total: 0

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

• total: 0

gorule-0000029

IEAs should be less than one year old.

• total: 0

gorule-0000030

Obsolete GO_REFs are not allowed

• total: 0

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

• total: 0

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

• total: 0

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

• total: 0

gorule-0000043

Check for valid combination of evidence code and GO_REF

• total: 0

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 0

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

• total: 0

gorule-0000055

References should have only one ID per ID space

• total: 0

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

• total: 0

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 0

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

• total: 0

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

• total: 0

other

• total: 0

GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0001522 pseudouridine synthesis AnnotationPropagation P GO:0004730 pseudouridylate synthase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090589 protein-phosphocysteine-trehalose phosphotransferase system transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015736 hexuronate transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015778 hexuronide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0009675 high-affinity sulfate:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0009675 high-affinity sulfate:proton symporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0015862 uridine transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0015341 zinc efflux active transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0043737 deoxyribonuclease V activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0015804 neutral amino acid transport AnnotationPropagation P GO:0015188 L-isoleucine transmembrane transporter activity IBA
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015188 L-isoleucine transmembrane transporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0015188 L-isoleucine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015188 L-isoleucine transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000451 rRNA 2'-O-methylation AnnotationPropagation P GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity IBA
GO:0015862 uridine transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0015726 L-idonate transmembrane transport AnnotationPropagation P GO:0015568 L-idonate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015811 L-cystine transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:1903791 uracil transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0009165 nucleotide biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015811 L-cystine transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008443 phosphofructokinase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:0015887 pantothenate transmembrane transport AnnotationPropagation P GO:0015233 pantothenate transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0046583 monoatomic cation efflux transmembrane transporter activity IBA
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0045127 N-acetylglucosamine kinase activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0015826 threonine transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015565 threonine efflux transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:1904659 glucose transmembrane transport AnnotationPropagation P GO:0005412 glucose:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005412 glucose:sodium symporter activity IBA
GO:0106004 tRNA (guanine-N7)-methylation AnnotationPropagation P GO:0008176 tRNA (guanine(46)-N7)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005247 voltage-gated chloride channel activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0009224 CMP biosynthetic process AnnotationPropagation P GO:0043771 cytidine kinase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:1903424 fluoride transmembrane transport AnnotationPropagation P GO:1903425 fluoride transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004127 (d)CMP kinase activity IBA
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0015099 nickel cation transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090589 protein-phosphocysteine-trehalose phosphotransferase system transporter activity IBA
GO:0015699 antimonite transmembrane transport AnnotationPropagation P GO:0042960 antimonite secondary active transmembrane transporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IBA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0019805 quinolinate biosynthetic process AnnotationPropagation P GO:0008987 quinolinate synthetase A activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0071266 'de novo' L-methionine biosynthetic process AnnotationPropagation P GO:0003961 O-acetylhomoserine aminocarboxypropyltransferase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity IBA
GO:0071422 succinate transmembrane transport AnnotationPropagation P GO:0015141 succinate transmembrane transporter activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0033862 UMP kinase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0015767 lactose transport AnnotationPropagation P GO:0015528 lactose:proton symporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004529 DNA exonuclease activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA