Group: paint - Dataset: paint_ecocyc
SUMMARY
This report generated on 2025-05-04
- Associations: 7200
- Lines in file (incl headers): 7209
- Lines skipped: 3
!gaf-version: 2.2
!Created on Tue Apr 15 12:22:23 2025.
!generated-by: PANTHER
!date-generated: 2025-04-15
!PANTHER version: v.19.0.
!GO version: 2025-03-16.
Contents
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gorule-0000046
gorule-0000050
gorule-0000055
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gorule-0000063
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other
MESSAGES
gorule-0000002
No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'
gorule-0000005
IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''
gorule-0000006
IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC
gorule-0000007
IPI should not be used with GO:0003824 catalytic activity or descendents
gorule-0000008
No annotations should be made to uninformative high level terms
Messages
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P0ABB8 mgtA is_active_in GO:0043231 GO_REF:0000033 IBA PANTHER:PTN000642960|UniProtKB:Q57VN6|TAIR:locus:2029794|TAIR:locus:2120096|PomBase:SPAPB2B4.04c|TAIR:locus:2062673|UniProtKB:P23634|MGI:MGI:105368|TAIR:locus:2082528|UniProtKB:P20020|MGI:MGI:104653|SGD:S000002974|dictyBase:DDB_G0277861 C Magnesium-transporting ATPase, P-type 1 UniProtKB:P0ABB8|PTN000643811 protein taxon:83333 20250412 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P27306 sthA involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|RGD:735073|UniProtKB:P0A9P0|SGD:S000001876|MGI:MGI:107450|UniProtKB:Q8IAZ6|UniProtKB:P09622 P Soluble pyridine nucleotide transhydrogenase UniProtKB:P27306|PTN001115362 protein taxon:83333 20240307 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P0A9T8 ybbA involved_in GO:0006810 GO_REF:0000033 IBA PANTHER:PTN002449941|UniProtKB:P16679 P Uncharacterized ABC transporter ATP-binding protein YbbA UniProtKB:P0A9T8|PTN000656694 protein taxon:83333 20241203 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P26616 maeA involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000601050|UniProtKB:Q16798|SGD:S000001512 P NAD-dependent malic enzyme UniProtKB:P26616|PTN001157980 protein taxon:83333 20250412 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P0A9P0 lpdA involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN000530299|RGD:735073|UniProtKB:P0A9P0|SGD:S000001876|MGI:MGI:107450|UniProtKB:Q8IAZ6|UniProtKB:P09622 P Dihydrolipoyl dehydrogenase UniProtKB:P0A9P0|PTN000530381 protein taxon:83333 20240307 GO_Central
- WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms --
UniProtKB P07003 poxB involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN008448631|UniProtKB:P07003 P Pyruvate dehydrogenase [ubiquinone] UniProtKB:P07003|PTN000438957 protein taxon:83333 20241203 GO_Central
gorule-0000011
ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND
gorule-0000013
Taxon-appropriate annotation check
gorule-0000015
Dual species taxon check
gorule-0000016
With/From: IC annotations require a With/From GO ID
gorule-0000017
IDA annotations must not have a With/From entry
gorule-0000018
IPI annotations require a With/From entry
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
Messages
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0004127) --
UniProtKB P0A6I0 cmk enables GO:0004127 GO_REF:0000033 IBA PANTHER:PTN000480631|UniProtKB:P0A6I0|UniProtKB:P9WPA9 F Cytidylate kinase UniProtKB:P0A6I0|PTN001083887 protein taxon:83333 20170228 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0004738) --
UniProtKB P0AFG8 aceE enables GO:0004738 GO_REF:0000033 IBA PANTHER:PTN000179188|UniProtKB:P9WIS9|UniProtKB:P0AFG8 F Pyruvate dehydrogenase E1 component UniProtKB:P0AFG8|PTN000907878 protein taxon:83333 20241126 GO_Central
- ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0009972) --
UniProtKB P0ABF6 cdd involved_in GO:0009972 GO_REF:0000033 IBA PANTHER:PTN000182087|UniProtKB:P32320|UniProtKB:P0ABF6|UniProtKB:P9WPH3|TAIR:locus:2050429|RGD:1311101 P Cytidine deaminase UniProtKB:P0ABF6|PTN000909360 protein taxon:83333 20200929 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004033) --
UniProtKB P30863 dkgB enables GO:0004033 GO_REF:0000033 IBA PANTHER:PTN002466222|UniProtKB:P30863 F 2,5-diketo-D-gluconic acid reductase B UniProtKB:P30863|PTN000920826 protein taxon:83333 20230720 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004033) --
UniProtKB P25906 pdxI enables GO:0004033 GO_REF:0000033 IBA PANTHER:PTN000199659|PomBase:SPAC9E9.11|TAIR:locus:2168601|UniProtKB:P25906|UniProtKB:O95154|RGD:628635|RGD:620311 F Pyridoxine 4-dehydrogenase UniProtKB:P25906|PTN000199752 protein taxon:83333 20250413 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004108) --
UniProtKB P31660 prpC enables GO:0004108 GO_REF:0000033 IBA PANTHER:PTN000201223|SGD:S000006205|FB:FBgn0261955|UniProtKB:O75390|SGD:S000005284|UniProtKB:O00098|PomBase:SPAC6C3.04|SGD:S000000598|UniProtKB:P31660|dictyBase:DDB_G0267426|TAIR:locus:2050554|UniProtKB:Q9TEM3|TAIR:locus:2098989|RGD:620330|TAIR:locus:2052379|MGI:MGI:88529 F 2-methylcitrate synthase UniProtKB:P31660|PTN000201330 protein taxon:83333 20230110 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P77319 hscC involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Chaperone protein HscC UniProtKB:P77319|PTN000453432 protein taxon:83333 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P0A6Z1 hscA involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Chaperone protein HscA UniProtKB:P0A6Z1|PTN000453433 protein taxon:83333 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P0A6Y8 dnaK involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Chaperone protein DnaK UniProtKB:P0A6Y8|PTN000452647 protein taxon:83333 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P08622 dnaJ involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN002454318|TAIR:locus:2162692|UniProtKB:P36659|UniProtKB:P08622 P Chaperone protein DnaJ UniProtKB:P08622|PTN001292762 protein taxon:83333 20231109 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P36659 cbpA involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN002454318|TAIR:locus:2162692|UniProtKB:P36659|UniProtKB:P08622 P Curved DNA-binding protein UniProtKB:P36659|PTN002534527 protein taxon:83333 20231109 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P0A6F5 groEL involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000143644|UniProtKB:P0A6F5 P Chaperonin GroEL UniProtKB:P0A6F5|PTN000143676 protein taxon:83333 20200206 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P0A6F9 groES involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000080668|UniProtKB:P0A6F9 P Co-chaperonin GroES UniProtKB:P0A6F9|PTN000080810 protein taxon:83333 20170228 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0051085) --
UniProtKB P36928 yegD involved_in GO:0051085 GO_REF:0000033 IBA PANTHER:PTN000452648|UniProtKB:P0A6Y8|MGI:MGI:105384 P Uncharacterized chaperone protein YegD UniProtKB:P36928|PTN001834350 protein taxon:83333 20230111 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P75749 ybgP involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Uncharacterized fimbrial chaperone YbgP UniProtKB:P75749|PTN001293291 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P0AEU7 skp involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN002170712|UniProtKB:P0AEU7 P Chaperone protein Skp UniProtKB:P0AEU7|PTN002170730 protein taxon:83333 20180315 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P33342 yehC involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone YehC UniProtKB:P33342|PTN000767360 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P0A850 tig involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN001254607|UniProtKB:P0A850 P Trigger factor UniProtKB:P0A850|PTN000777999 protein taxon:83333 20171130 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P75856 elfD involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone protein ElfD UniProtKB:P75856|PTN001293297 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P31697 fimC involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Chaperone protein FimC UniProtKB:P31697|PTN001293294 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P42914 yraI involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone YraI UniProtKB:P42914|PTN001293296 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P0ABZ6 surA involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN005352065|UniProtKB:P0ABZ6 P Chaperone SurA UniProtKB:P0ABZ6|PTN000069687 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P33128 yadV involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone YadV UniProtKB:P33128|PTN000767361 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P77202 dsbG involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN008667198|UniProtKB:P77202|UniProtKB:P0AEG6 P Thiol:disulfide interchange protein DsbG UniProtKB:P77202|PTN002174080 protein taxon:83333 20250212 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P0ADY1 ppiD involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN005348492|UniProtKB:P0ADY1 P Periplasmic chaperone PpiD UniProtKB:P0ADY1|PTN000069686 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P77599 yfcS involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone YfcS UniProtKB:P77599|PTN001293290 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P0AEG6 dsbC involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN008667198|UniProtKB:P77202|UniProtKB:P0AEG6 P Thiol:disulfide interchange protein DsbC UniProtKB:P0AEG6|PTN002174089 protein taxon:83333 20250212 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P77616 yqiH involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Uncharacterized fimbrial chaperone YqiH UniProtKB:P77616|PTN001293295 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P40876 ycbF involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Uncharacterized fimbrial chaperone YcbF UniProtKB:P40876|PTN001293292 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P77249 sfmC involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Probable fimbrial chaperone SfmC UniProtKB:P77249|PTN001293293 protein taxon:83333 20240827 GO_Central
- WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061077) --
UniProtKB P28722 yhcA involved_in GO:0061077 GO_REF:0000033 IBA PANTHER:PTN004740452|UniProtKB:P31697 P Uncharacterized fimbrial chaperone YhcA UniProtKB:P28722|PTN001575787 protein taxon:83333 20240827 GO_Central
gorule-0000022
Check for, and filter, annotations made to retracted publications
gorule-0000028
GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect
gorule-0000029
IEAs should be less than one year old.
gorule-0000030
Obsolete GO_REFs are not allowed
gorule-0000037
IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference
gorule-0000039
Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants
gorule-0000042
Qualifier: IKR evidence code requires a NOT qualifier
gorule-0000043
Check for valid combination of evidence code and GO_REF
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
gorule-0000050
Annotations to ISS, ISA and ISO should not be self-referential
gorule-0000055
References should have only one ID per ID space
gorule-0000058
Object extensions should conform to the extensions-patterns.yaml file in metadata
gorule-0000061
Allowed gene product to term relations (gp2term)
gorule-0000063
Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)
gorule-0000064
TreeGrafter IEAs should be filtered for GO reference species
gorule-0000065
Annotations to term that are candidates for obsoletion should be removed
Messages
- WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed --
UniProtKB P69490 ccmE involved_in GO:0018063 GO_REF:0000033 IBA PANTHER:PTN002436954|TAIR:locus:2074363 P Cytochrome c-type biogenesis protein CcmE UniProtKB:P69490|PTN002148589 protein taxon:83333 20250313 GO_Central
other
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0009977 proton motive force dependent protein transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0036308 16S rRNA (guanine(1516)-N(2))-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0015871 choline transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0015847 putrescine transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004747 ribokinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004536 DNA nuclease activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0001522 pseudouridine synthesis AnnotationPropagation P GO:0004730 pseudouridylate synthase activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005247 voltage-gated chloride channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006665 sphingolipid metabolic process IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090564 protein-phosphocysteine-glucose phosphotransferase system transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0035600 tRNA methylthiolation AnnotationPropagation P GO:0035597 tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0120014 phospholipid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0120014 phospholipid transfer activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015169 glycerol-3-phosphate transmembrane transporter activity IBA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090585 protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0015847 putrescine transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0046836 glycolipid transport AnnotationPropagation P GO:0017089 glycolipid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0017089 glycolipid transfer activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0015774 polysaccharide transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015294 solute:monoatomic cation symporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0052907 23S rRNA (adenine(1618)-N(6))-methyltransferase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015169 glycerol-3-phosphate transmembrane transporter activity IBA
GO:0015706 nitrate transmembrane transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0009977 proton motive force dependent protein transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0009384 N-acylmannosamine kinase activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0052913 16S rRNA (guanine(966)-N(2))-methyltransferase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0045127 N-acetylglucosamine kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0015774 polysaccharide transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0006761 dihydrofolate biosynthetic process AnnotationPropagation P GO:0008841 dihydrofolate synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015620 ferric-enterobactin transmembrane transporter activity IBA
GO:0015685 ferric-enterobactin import into cell AnnotationPropagation P GO:0015620 ferric-enterobactin transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090588 protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0015760 glucose-6-phosphate transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0009009 site-specific recombinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015862 uridine transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903716 guanine transmembrane transport AnnotationPropagation P GO:0015208 guanine transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034775 glutathione transmembrane transport AnnotationPropagation P GO:0034634 glutathione transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006835 dicarboxylic acid transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0015699 antimonite transmembrane transport AnnotationPropagation P GO:0042960 antimonite secondary active transmembrane transporter activity IBA
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015736 hexuronate transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015778 hexuronide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0015757 galactose transmembrane transport AnnotationPropagation P GO:0005354 galactose transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0015811 L-cystine transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:0015821 methionine transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0071424 rRNA (cytosine-N4-)-methyltransferase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0033863 ribose 1,5-bisphosphate phosphokinase activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0015726 L-idonate transmembrane transport AnnotationPropagation P GO:0015568 L-idonate transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015144 carbohydrate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:1903791 uracil transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004529 DNA exonuclease activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015366 malate:proton symporter activity IBA
GO:0071423 malate transmembrane transport AnnotationPropagation P GO:0015366 malate:proton symporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070677 rRNA (cytosine-2'-O-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA