Table of contents

Report

Group: paint - Dataset: paint_cgd

SUMMARY

This report generated on 2024-06-11

Header From Original Association File

!gaf-version: 2.2
!Created on Tue Feb 13 09:38:51 2024.
!generated-by: PANTHER
!date-generated: 2024-02-13
!PANTHER version: v.17.0.
!GO version: 2024-01-17.

Contents

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MESSAGES

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

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IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

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No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

gorule-0000013

Taxon-appropriate annotation check

Messages

gorule-0000015

Dual species taxon check

gorule-0000016

With/From: IC annotations require a With/From GO ID

gorule-0000017

IDA annotations must not have a With/From entry

gorule-0000018

IPI annotations require a With/From entry

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

gorule-0000029

IEAs should be less than one year old.

gorule-0000030

Obsolete GO_REFs are not allowed

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

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Check for valid combination of evidence code and GO_REF

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

Messages

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

gorule-0000055

References should have only one ID per ID space

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

gorule-0000061

Allowed gene product to term relations (gp2term)

Messages

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

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TreeGrafter IEAs should be filtered for GO reference species

other

Predictions

GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0005371 tricarboxylate secondary active transmembrane transporter activity IBA
GO:0106004 tRNA (guanine-N7)-methylation AnnotationPropagation P GO:0008176 tRNA (guanine(46)-N7)-methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042799 histone H4K20 methyltransferase activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0022904 respiratory electron transport chain AnnotationPropagation P GO:0004174 electron-transferring-flavoprotein dehydrogenase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0035350 FAD transmembrane transport AnnotationPropagation P GO:0015230 FAD transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008865 fructokinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046972 histone H4K16 acetyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0015369 calcium:proton antiporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015369 calcium:proton antiporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0005078 MAP-kinase scaffold activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0043998 histone H2A acetyltransferase activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity IBA
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004103 choline kinase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0031151 histone H3K79 methyltransferase activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0001522 pseudouridine synthesis AnnotationPropagation P GO:0004730 pseudouridylate synthase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0009107 lipoate biosynthetic process AnnotationPropagation P GO:0016992 lipoate synthase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0033260 nuclear DNA replication IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0072334 UDP-galactose transmembrane transport AnnotationPropagation P GO:0005459 UDP-galactose transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0048257 3'-flap endonuclease activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:1990180 mitochondrial tRNA 3'-end processing IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0006412 translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016435 rRNA (guanine) methyltransferase activity IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005436 sodium:phosphate symporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005436 sodium:phosphate symporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002196 Ser-tRNA(Ala) hydrolase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0006390 mitochondrial transcription AnnotationPropagation P GO:0034246 mitochondrial transcription factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071423 malate transmembrane transport AnnotationPropagation P GO:0015140 malate transmembrane transporter activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0022904 respiratory electron transport chain AnnotationPropagation P GO:0004174 electron-transferring-flavoprotein dehydrogenase activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008553 P-type proton-exporting transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015355 secondary active monocarboxylate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015355 secondary active monocarboxylate transmembrane transporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0017116 single-stranded DNA helicase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015837 amine transport AnnotationPropagation P GO:0005275 amine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005275 amine transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0006269 DNA replication, synthesis of primer AnnotationPropagation P GO:0003896 DNA primase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity IBA
GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA
GO:0015867 ATP transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity IBA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0035352 NAD transmembrane transport AnnotationPropagation P GO:0051724 NAD transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0051864 histone H3K36 demethylase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008559 ABC-type xenobiotic transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0008559 ABC-type xenobiotic transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0015700 arsenite transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0099116 tRNA 5'-end processing AnnotationPropagation P GO:0008193 tRNA guanylyltransferase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0071918 urea transmembrane transport AnnotationPropagation P GO:0015204 urea transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0140107 high-affinity potassium ion transmembrane transporter activity IBA
GO:0071918 urea transmembrane transport AnnotationPropagation P GO:0015204 urea transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0070574 cadmium ion transmembrane transport AnnotationPropagation P GO:0015086 cadmium ion transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000965 mitochondrial RNA 3'-end processing IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0038024 cargo receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0071266 'de novo' L-methionine biosynthetic process AnnotationPropagation P GO:0003961 O-acetylhomoserine aminocarboxypropyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1903401 L-lysine transmembrane transport AnnotationPropagation P GO:0015189 L-lysine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015189 L-lysine transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0008554 P-type sodium transporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IBA
GO:0042939 tripeptide transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0038024 cargo receptor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008865 fructokinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0015746 citrate transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:0035674 tricarboxylic acid transmembrane transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0000064 L-ornithine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA

Predictions (experimental)