• Report (original)
• Predictions
• Predictions (experimental)

Group: unknown - Dataset: unknown

SUMMARY

This report generated on 2025-10-11

• Associations: 12360
• Lines in file (incl headers): 12395
• Lines skipped: 32

Header From Original Association File

!gpa-version: 1.2
!collation date: 2025-10-10
!collated from production models in https://github.com/geneontology/noctua-models/ where col1 matches rgd; special rules for MGI (https://github.com/geneontology/pipeline/issues/313)

Contents

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gorule-0000015

gorule-0000016

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000022

gorule-0000026

gorule-0000029

gorule-0000030

gorule-0000037

gorule-0000039

gorule-0000042

gorule-0000043

gorule-0000046

gorule-0000050

gorule-0000055

gorule-0000058

gorule-0000061

gorule-0000063

gorule-0000064

gorule-0000065

other

MESSAGES

gorule-0000001

• total: 18

Messages

• ERROR - Invalid symbol: Problem parsing references (PMID: 11288147) -- RGD 3696 acts_upstream_of_or_within GO:0071456 PMID: 11288147 ECO:0000314 20200820 MGI noctua-model-id=gomodel:5ee8120100003562|model-state=production|contributor=https://orcid.org/0000-0003-3394-9805
• ERROR - Invalid symbol: Problem parsing references (PMID:2427363 | RGD:1580046) -- RGD 3853 involved_in GO:0006585 PMID:2427363 | RGD:1580046 ECO:0000314 20250507 RGD noctua-model-id=gomodel:680ad14200003035|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Invalid symbol: Problem parsing references (PMID:15496595 | RGD:1580025) -- RGD 3853 is_active_in GO:0008021 PMID:15496595 | RGD:1580025 ECO:0000314 20250507 RGD noctua-model-id=gomodel:680ad14200003035|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Invalid symbol: Problem parsing references (PMID:19584816 | RGD:5130972) -- RGD 3853 involved_in GO:0006585 PMID:19584816 | RGD:5130972 ECO:0000315 20250507 RGD noctua-model-id=gomodel:680ad14200003035|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Invalid symbol: Problem parsing references (PMID:20025246 | RGD:4139888) -- RGD 3853 enables GO:0004511 PMID:20025246 | RGD:4139888 ECO:0000314 20250507 RGD has_input(CHEBI:17895),has_input(CHEBI:30436),has_output(CHEBI:15765),has_output(CHEBI:20680) noctua-model-id=gomodel:680ad14200003035|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000312) -- RGD 3803 involved_in GO:0005546 PMID:22810233 ECO:0000312 20250616 RGD part_of(GO:0048278) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000312) -- RGD 3803 enables GO:0005484 PMID:22810233 ECO:0000312 20250616 RGD part_of(GO:0005546),part_of(GO:0048278),part_of(GO:0061025) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620518 is_active_in GO:0098978 PMID:22036572 ECO:0000005 20240306 SynGO part_of(UBERON:0002421) model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_1398
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620518 involved_in GO:0099502 PMID:22036572 ECO:0000005 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_1398
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620519 is_active_in GO:0098978 PMID:22036572 ECO:0000005 20240306 SynGO part_of(UBERON:0002421) model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_1399
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620519 involved_in GO:0099502 PMID:22036572 ECO:0000005 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_1399
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 69313 is_active_in GO:0031594 PMID:26820598 ECO:0000005 20240306 SynGO noctua-model-id=gomodel:SYNGO_2109|contributor=https://orcid.org/0000-0002-4973-5732|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 3728 is_active_in GO:0098978 PMID:8103915 ECO:0000005 20240306 SynGO part_of(UBERON:0000955) contributor=https://orcid.org/0000-0003-1542-3498|contributor=https://orcid.org/0000-0002-3898-5197|model-state=production|contributor=https://orcid.org/0000-0002-0808-7003|noctua-model-id=gomodel:SYNGO_275
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 3728 involved_in GO:0016079 PMID:8103915 ECO:0000005 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0003-1542-3498|contributor=https://orcid.org/0000-0002-3898-5197|model-state=production|contributor=https://orcid.org/0000-0002-0808-7003|noctua-model-id=gomodel:SYNGO_275
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 3198 is_active_in GO:0098978 PMID:11677256 ECO:0000005 20240306 SynGO part_of(UBERON:0002421) contributor=https://orcid.org/0000-0003-2916-7616|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_4055|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 3198 involved_in GO:0099538 PMID:11677256 ECO:0000005 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0003-2916-7616|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_4055|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620475 involved_in GO:0099538 PMID:11677256 ECO:0000005 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0003-2916-7616|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_4056|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Unknown evidence class: Expecting a known ECO class ID that maps to an ECO GAF code (ECO:0000005) -- RGD 620475 is_active_in GO:0098978 PMID:11677256 ECO:0000005 20240306 SynGO part_of(UBERON:0002421) contributor=https://orcid.org/0000-0003-2916-7616|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|noctua-model-id=gomodel:SYNGO_4056|contributor=https://orcid.org/0000-0002-2286-1587

gorule-0000002

• total: 0

gorule-0000005

• total: 0

gorule-0000006

• total: 0

gorule-0000007

• total: 0

gorule-0000008

• total: 26

Messages

• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 3696 part_of GO:0005622 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 621594 enables GO:0140657 PMID:11931741 ECO:0000314 20250619 RGD part_of(GO:0016887),part_of(GO:0043243) noctua-model-id=gomodel:684b6c8100001759|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0005589 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006063 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007719 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0000314 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006013 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0000314 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007695 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006013 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006063 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006013 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007719 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006013 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007719 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006063 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0006063 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0000314 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007719 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007695 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007695 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0005589 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0000955) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0000314 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0005589 20240306 SynGO occurs_in(GO:0045202) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0005589 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RGD 2517 involved_in GO:0006810 PMID:19755421 ECO:0007695 20240306 SynGO occurs_in(GO:0045202),occurs_in(UBERON:0002421) contributor=https://orcid.org/0000-0002-5615-1014|noctua-model-id=gomodel:SYNGO_1628|model-state=production

gorule-0000011

• total: 0

gorule-0000013

• total: 0

gorule-0000015

• total: 0

gorule-0000016

• total: 0

gorule-0000017

• total: 0

gorule-0000018

• total: 29

Messages

• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3785 enables GO:0005515 PMID:30893606 ECO:0000353 20250612 RGD has_input(RGD:69430) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3949 enables GO:0044877 pmid:26030875 ECO:0000353 20250613 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3803 involved_in GO:0005546 PMID:24973220 ECO:0000353 20250616 RGD occurs_in(GO:0005886) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 619722 enables GO:0044877 pmid:26030875 ECO:0000353 20250613 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3803 involved_in GO:0061025 PMID:22810233 ECO:0000353 20250616 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3803 enables GO:0042802 PMID:24973220 ECO:0000353 20250616 RGD part_of(GO:0051260) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3803 enables GO:0005546 PMID:24973220 ECO:0000353 20250616 RGD occurs_in(GO:0005886) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3785 enables GO:0044877 pmid:26030875 ECO:0000353 20250613 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 708573 enables GO:0005515 PMID:30893606 ECO:0000353 20250612 RGD part_of(GO:0099011),has_input(RGD:619722),directly_positively_regulates(GO:0044877) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3803 involved_in GO:0051260 PMID:24973220 ECO:0000353 20250616 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3728 enables GO:0017075 pmid:26030875 ECO:0000353 20250613 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3728 enables GO:0044877 PMID:30893606 ECO:0000353 20250612 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 69437 enables GO:0035255 PMID:10027300 ECO:0000353 20250619 RGD part_of(GO:0097113),occurs_in(GO:0060076) noctua-model-id=gomodel:684b6c8100001759|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621594 enables GO:0044877 PMID:11931741 ECO:0000353 20250619 RGD part_of(GO:0043243) noctua-model-id=gomodel:684b6c8100001759|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621594 enables GO:0005515 PMID:11931741 ECO:0000353 20250717 RGD part_of(GO:0043243),has_input(RGD:620855) noctua-model-id=gomodel:684b6c8100001759|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621667 enables GO:0035255 pmid:9069286 ECO:0000353 20250912 RGD has_input(RGD:61862) noctua-model-id=gomodel:685de18700007549|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621667 enables GO:0035255 PMID:23460828 ECO:0000353 20250717 RGD has_input(RGD:61862) model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700002061
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 1309009 enables GO:0030165 pmid:11931740 ECO:0000353 20250717 RGD part_of(GO:1904719),has_input(RGD:621667) model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700002061
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621594 enables GO:0035255 PMID:11931741 ECO:0000353 20250801 RGD model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700004517
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 620760 enables GO:0051117 PMID:20802490 ECO:0000353 20250723 RGD part_of(GO:0002092),has_input(RGD:621594),directly_negatively_regulates(GO:0035255) model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700004517
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 620365 enables GO:0003730 PMID:20805360 ECO:0000353 20250724 RGD part_of(GO:0061158),occurs_in(GO:0005737),has_input(RGD:2945) model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700004748
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 1308649 enables GO:0003730 PMID:20805360 ECO:0000353 20250724 RGD part_of(GO:1905870),occurs_in(GO:0005737),has_input(RGD:2945) model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700004748
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 3395 enables GO:0044877 PMID:16055064 ECO:0000353 20250731 RGD model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6882d2b800001534
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621667 enables GO:0035255 PMID:23460828 ECO:0000353 20250801 RGD has_input(RGD:61862) noctua-model-id=gomodel:6882d2b800001707|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 69437 enables GO:0035255 PMID:10027300 ECO:0000353 20250801 RGD noctua-model-id=gomodel:6882d2b800001707|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 69437 involved_in GO:0097113 PMID:10027300 ECO:0000353 20250801 RGD noctua-model-id=gomodel:6882d2b800001808|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 621667 enables GO:0035255 PMID:23460828 ECO:0000353 20250801 RGD has_input(RGD:61862) noctua-model-id=gomodel:6882d2b800001808|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 69437 enables GO:0035255 PMID:10027300 ECO:0000353 20250801 RGD part_of(GO:0097113),occurs_in(GO:0060076) noctua-model-id=gomodel:6882d2b800001808|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- RGD 620760 enables GO:0051117 PMID:20802490 ECO:0000353 20250801 RGD part_of(GO:0002092),has_input(RGD:621594),directly_positively_regulates(GO:0035255) noctua-model-id=gomodel:6882d2b800001808|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683

gorule-0000020

• total: 13

Messages

• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042135) -- RGD 69313 involved_in GO:0042135 PMID:26820598 ECO:0000005 20240306 SynGO occurs_in(GO:0031594) noctua-model-id=gomodel:SYNGO_2109|contributor=https://orcid.org/0000-0002-4973-5732|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042136) -- RGD 2653 involved_in GO:0042136 PMID:8336154 ECO:0000005 20240306 SynGO noctua-model-id=gomodel:SYNGO_3124|contributor=https://orcid.org/0000-0003-0593-3443|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042136) -- RGD 2653 involved_in GO:0042136 PMID:8336154 ECO:0007695 20240306 SynGO noctua-model-id=gomodel:SYNGO_3124|contributor=https://orcid.org/0000-0003-0593-3443|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042136) -- RGD 2653 involved_in GO:0042136 PMID:8336154 ECO:0006063 20240306 SynGO noctua-model-id=gomodel:SYNGO_3124|contributor=https://orcid.org/0000-0003-0593-3443|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 620795 involved_in GO:0098962 PMID:9005855 ECO:0006006 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0003-0662-9523|model-state=production|contributor=https://orcid.org/0000-0003-2949-9725|noctua-model-id=gomodel:SYNGO_1784
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 620795 involved_in GO:0098962 PMID:9005855 ECO:0006013 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0003-0662-9523|model-state=production|contributor=https://orcid.org/0000-0003-2949-9725|noctua-model-id=gomodel:SYNGO_1784
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 620795 involved_in GO:0098962 PMID:9005855 ECO:0006054 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0003-0662-9523|model-state=production|contributor=https://orcid.org/0000-0003-2949-9725|noctua-model-id=gomodel:SYNGO_1784
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 620795 involved_in GO:0098962 PMID:9005855 ECO:0007695 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0003-0662-9523|model-state=production|contributor=https://orcid.org/0000-0003-2949-9725|noctua-model-id=gomodel:SYNGO_1784
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 620795 involved_in GO:0098962 PMID:9005855 ECO:0000314 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002240) contributor=https://orcid.org/0000-0003-0662-9523|model-state=production|contributor=https://orcid.org/0000-0003-2949-9725|noctua-model-id=gomodel:SYNGO_1784
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 1304930 involved_in GO:0098962 PMID:24853943 ECO:0006013 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) noctua-model-id=gomodel:SYNGO_2187|contributor=https://orcid.org/0000-0001-9783-5183|model-state=production|contributor=https://orcid.org/0000-0002-5676-366X
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 1304930 involved_in GO:0098962 PMID:24853943 ECO:0006052 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) noctua-model-id=gomodel:SYNGO_2187|contributor=https://orcid.org/0000-0001-9783-5183|model-state=production|contributor=https://orcid.org/0000-0002-5676-366X
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 1305310 involved_in GO:0098962 PMID:26720915 ECO:0006063 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) noctua-model-id=gomodel:SYNGO_3861|contributor=https://orcid.org/0000-0003-0593-3443|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0098962) -- RGD 1305310 involved_in GO:0098962 PMID:26720915 ECO:0006013 20240306 SynGO occurs_in(GO:0098978),occurs_in(UBERON:0002421) noctua-model-id=gomodel:SYNGO_3861|contributor=https://orcid.org/0000-0003-0593-3443|model-state=production|contributor=https://orcid.org/0000-0002-2514-0216|contributor=https://orcid.org/0000-0002-2286-1587

gorule-0000022

• total: 0

gorule-0000026

• total: 1

Messages

• ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- RGD 628688 enables GO:0003756 PAINT_REF:18929 ECO:0000318 PANTHER:PTN000432607 20180716 WB model-state=production|noctua-model-id=gomodel:5b318d0900000296|contributor=https://orcid.org/0000-0002-3013-9906

gorule-0000029

• total: 0

gorule-0000030

• total: 0

gorule-0000037

• total: 0

gorule-0000039

• total: 0

gorule-0000042

• total: 0

gorule-0000043

• total: 0

gorule-0000046

• total: 3

Messages

• WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- RGD 3802 involved_in GO:0051260 pmid:12181340 ECO:0001183 20250611 RGD model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:682fbcd000006614
• WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- RGD 3803 involved_in GO:0051260 PMID:24973220 ECO:0000353 20250616 RGD noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- RGD 69437 involved_in GO:0051260 PMID:11466413 ECO:0000315 20250731 RGD model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6882d2b800001534

gorule-0000050

• total: 0

gorule-0000055

• total: 0

gorule-0000058

• total: 0

gorule-0000061

• total: 16

Messages

• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0005768 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0031982 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0005622 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0005886 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3697 part_of GO:0009986 PMID:15187084 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0030425 PMID:9409715 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0009986 PMID:15187084 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0045202 PMID:9409715 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0043025 PMID:9409715 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0009986 PMID:17868307 ECO:0000314 20200814 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025 -- RGD 3696 part_of GO:0043679 PMID:9409715 ECO:0000314 20200813 MGI model-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002331 should be one of RO:0002327, RO:0002326. Repaired to RO:0002327 -- RGD 3803 involved_in GO:0005546 PMID:22810233 ECO:0000312 20250616 RGD part_of(GO:0048278) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002331 should be one of RO:0002327, RO:0002326. Repaired to RO:0002327 -- RGD 3803 involved_in GO:0005546 PMID:24973220 ECO:0000353 20250616 RGD occurs_in(GO:0005886) noctua-model-id=gomodel:682fbcd000006913|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002331 should be one of RO:0002327, RO:0002326. Repaired to RO:0002327 -- RGD 621594 involved_in GO:0016887 PMID:11931741 ECO:0000314 20250619 RGD part_of(GO:0043243),has_input(CHEBI:15422),directly_negatively_regulates(GO:0035255) noctua-model-id=gomodel:684b6c8100001759|model-state=production|contributor=https://orcid.org/0000-0001-5256-8683
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002432 should be one of RO:0004032, RO:0002263, RO:0004033, RO:0002264, RO:0004035, RO:0004034, RO:0002331. Repaired to RO:0002264 -- RGD 735139 is_active_in GO:0099156 PMID:24333843 ECO:0006003 20240306 SynGO part_of(UBERON:0000988) contributor=https://orcid.org/0000-0003-3185-5709|model-state=production|contributor=https://orcid.org/0000-0001-7351-8706|contributor=https://orcid.org/0000-0003-0938-8534|noctua-model-id=gomodel:SYNGO_1023|contributor=https://orcid.org/0000-0002-0755-5899
• WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: RO:0002432 should be one of RO:0004032, RO:0002263, RO:0004033, RO:0002264, RO:0004035, RO:0004034, RO:0002331. Repaired to RO:0002264 -- RGD 735139 is_active_in GO:0099156 PMID:24333843 ECO:0007719 20240306 SynGO part_of(UBERON:0000988) contributor=https://orcid.org/0000-0003-3185-5709|model-state=production|contributor=https://orcid.org/0000-0001-7351-8706|contributor=https://orcid.org/0000-0003-0938-8534|noctua-model-id=gomodel:SYNGO_1023|contributor=https://orcid.org/0000-0002-0755-5899

gorule-0000063

• total: 0

gorule-0000064

• total: 0

gorule-0000065

• total: 1

Messages

• WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- RGD 620795 involved_in GO:2000969 PMID:15240807 ECO:0000315 20250923 RGD model-state=production|contributor=https://orcid.org/0000-0001-5256-8683|noctua-model-id=gomodel:6870555700002061

other

• total: 0

No report generated.

No report generated.