Table of contents

Summary

GAF summary

Found 144693 annotations in 144726 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000005 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000005) No ISS or ISS-related annotations to 'protein binding ; GO:0005515', there are 224 violations with type Error.

For rule GO_AR:0000011 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000011) ND annotations to root nodes only, there are 3 violations with type Error.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there are 8 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 224 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 292 violations with type Warning.

For rule GO_AR:0000011 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000011) ND annotations to root nodes only, there are 31400 violations with type Warning.

GAF Prediction Summary

Found 7618 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

Group: jcvi - Dataset: jcvi

SUMMARY

This report generated on 2018-10-19

Contents

gorule-0000008

gorule-0000011

gorule-0000016

gorule-0000020

gorule-0000027

gorule-0000029

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages