• Report (original)
• Predictions (original)
• Predictions (experimental) (original)

Group: japonicusdb - Dataset: japonicusdb

SUMMARY

This report generated on 2025-05-04

• Associations: 3685
• Lines in file (incl headers): 11956
• Lines skipped: 8266

Header From Original Association File

!gaf-version: 2.2
!generated-by: JaponicusDB
!date-generated: 2025-05-04T04:59
!URL: https://www.japonicusdb.org
!contact: helpdesk@pombase.org

Contents

gorule-0000002

gorule-0000005

gorule-0000006

gorule-0000007

gorule-0000008

gorule-0000011

gorule-0000013

gorule-0000015

gorule-0000016

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000022

gorule-0000028

gorule-0000029

gorule-0000030

gorule-0000037

gorule-0000039

gorule-0000042

gorule-0000043

gorule-0000046

gorule-0000050

gorule-0000055

gorule-0000058

gorule-0000061

gorule-0000063

gorule-0000064

gorule-0000065

other

MESSAGES

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

• total: 0

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 0

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

• total: 0

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

• total: 0

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 6

Messages

• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_00464 pyr1 involved_in GO:0006090 GO_REF:0000033 IBA PANTHER:PTN001821692,RGD:3262 P pyruvate carboxylase Pyr1 protein taxon:4897 20181004 GO_Central
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_02176 mae2 involved_in GO:0006090 GO_REF:0000033 IBA MGI:MGI:1916679,MGI:MGI:2147351,PANTHER:PTN000601050,PomBase:SPCC794.12c,SGD:S000001512,UniProtKB:Q16798 P malic enzyme, malate dehydrogenase (oxaloacetate decarboxylating), Mae2 protein taxon:4897 20230111 GO_Central
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_02371 ptr1 involved_in GO:0046907 GO_REF:0000117 IEA ARBA:ARBA00027388 P HECT-type ubiquitin-protein ligase E3 Ptr1 protein taxon:4897 20250303 UniProt
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_03860 SJAG_03860 involved_in GO:0046907 GO_REF:0000117 IEA ARBA:ARBA00027388 P HECT-type ubiquitin-protein ligase E3 Ptr1-like protein taxon:4897 20250303 UniProt
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_04600 pub3 involved_in GO:0046907 GO_REF:0000117 IEA ARBA:ARBA00027388 P HECT-type ubiquitin-protein ligase E3 Pub3 protein taxon:4897 20250303 UniProt
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- JaponicusDB SJAG_05736 ksh1 involved_in GO:0046907 GO_REF:0000033 IBA FB:FBgn0040890,PANTHER:PTN000325642 P Golgi kish family protein Ksh1 protein taxon:4897 20170228 GO_Central

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

• total: 0

gorule-0000013

Taxon-appropriate annotation check

• total: 0

gorule-0000015

Dual species taxon check

• total: 0

gorule-0000016

With/From: IC annotations require a With/From GO ID

• total: 0

gorule-0000017

IDA annotations must not have a With/From entry

• total: 0

gorule-0000018

IPI annotations require a With/From entry

• total: 0

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 1

Messages

• WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0061509) -- JaponicusDB SJAG_01790 ppa3 involved_in GO:0061509 GO_REF:0000033 IBA PANTHER:PTN002268716,PomBase:SPAC22H10.04 P serine/threonine protein phosphatase PP2A catalytic subunit Ppa3 protein taxon:4897 20211208 GO_Central

gorule-0000022

Check for, and filter, annotations made to retracted publications

• total: 0

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

• total: 0

gorule-0000029

IEAs should be less than one year old.

• total: 74

Messages

• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00097 SJAG_00097 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P aminotransferase, class I/classII protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00197 ura3 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P mitochondrial dihydroorotate dehydrogenase Ura3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00251 dph4 involved_in GO:0017183 GO_REF:0000041 IEA UniPathway:UPA00559 P diphthamide biosynthesis protein Dph4 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00260 sdh2 involved_in GO:0006099 GO_REF:0000041 IEA UniPathway:UPA00223 P succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00309 adi1 involved_in GO:0019509 GO_REF:0000041 IEA UniPathway:UPA00904 P acireductone dioxygenase family Adi1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00381 thi4 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P bifunctional thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00444 ura2 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P dihydroorotase Ura2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00495 car2 involved_in GO:0055129 GO_REF:0000041 IEA UniPathway:UPA00098 P ornithine transaminase Car2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00519 mpo1 involved_in GO:0006048 GO_REF:0000041 IEA UniPathway:UPA00113 P ER membrane fatty acid alpha-oxygenase Mpo1/glucosamine-phosphate N-acetyltransferase Gna1, tandem fusion protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00529 fol3 involved_in GO:0046901 GO_REF:0000041 IEA UniPathway:UPA00850 P folylpolyglutamate synthase Fol3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00660 pro1 involved_in GO:0055129 GO_REF:0000041 IEA UniPathway:UPA00098 P gamma-glutamyl phosphate reductase Pro1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00694 ura5 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P orotate phosphoribosyltransferase Ura5 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00721 coq4 involved_in GO:0006744 GO_REF:0000041 IEA UniPathway:UPA00232 P 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase Coq4 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00831 dpm3 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P dolichol-phosphate mannosyltransferase subunit 3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00869 lys1 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P aminoadipate-semialdehyde dehydrogenase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_00964 ura1 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01070 ado1 involved_in GO:0044209 GO_REF:0000041 IEA UniPathway:UPA00588 P adenosine kinase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01081 ade6 involved_in GO:0006189 GO_REF:0000041 IEA UniPathway:UPA00074 P phosphoribosylaminoimidazole carboxylase Ade6 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01233 pps1 involved_in GO:0006646 GO_REF:0000041 IEA UniPathway:UPA00558 P CDP-diacylglycerol-serine O-phosphatidyltransferase Pps1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01351 gsa1 involved_in GO:0006750 GO_REF:0000041 IEA UniPathway:UPA00142 P glutathione synthetase large and small subunit Gsa1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01372 hem2 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P porphobilinogen synthase Hem2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01416 gpi12 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-L, N-acetylglucosaminylphosphatidyl inositoldeacetylase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01418 dph3 involved_in GO:0017183 GO_REF:0000041 IEA UniPathway:UPA00559 P diphthamide biosynthesis protein Dph3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01574 lys2 involved_in GO:0019878 GO_REF:0000041 IEA UniPathway:UPA00033 P homoaconitate hydratase Lys2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01661 ade4 involved_in GO:0006189 GO_REF:0000041 IEA UniPathway:UPA00074 P amidophosphoribosyltransferase Ade4 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01671 sdh1 involved_in GO:0006099 GO_REF:0000041 IEA UniPathway:UPA00223 P succinate dehydrogenase Sdh1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01766 shm1 involved_in GO:0035999 GO_REF:0000041 IEA UniPathway:UPA00193 P serine hydroxymethyltransferase Shm1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01784 uge1 involved_in GO:0006012 GO_REF:0000041 IEA UniPathway:UPA00214 P UDP-glucose 4-epimerase Uge1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_01997 gud1 involved_in GO:0006147 GO_REF:0000041 IEA UniPathway:UPA00603 P guanine deaminase Gud1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02148 gcd1 involved_in GO:0006098 GO_REF:0000041 IEA UniPathway:UPA00115 P glucose dehydrogenase Gcd1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02400 his7 involved_in GO:0000105 GO_REF:0000041 IEA UniPathway:UPA00031 P phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02408 abz1 involved_in GO:0046654 GO_REF:0000041 IEA UniPathway:UPA00077 P para-aminobenzoate synthase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02467 dph5 involved_in GO:0017183 GO_REF:0000041 IEA UniPathway:UPA00559 P diphthine synthase Dph5 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02488 SJAG_02488 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-F/3-ketosphinganine reductase fusion protein protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02766 ure2 involved_in GO:0043419 GO_REF:0000041 IEA UniPathway:UPA00258 P nickel-dependent urease Ure2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02776 gab1 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P Pig-U, Gab1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02783 pmm1 involved_in GO:0009298 GO_REF:0000041 IEA UniPathway:UPA00126 P phosphomannomutase Pmm1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02804 gpi15 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-H protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02850 ade8 involved_in GO:0006189 GO_REF:0000041 IEA UniPathway:UPA00074 P adenylosuccinate lyase Ade8 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02876 hem14 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P protoporphyrinogen oxidase Hem14 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02896 hem3 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P hydroxymethylbilane synthase Hem3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02902 psd3 involved_in GO:0006646 GO_REF:0000041 IEA UniPathway:UPA00558 P phosphatidylserine decarboxylase Psd3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_02903 dpm1 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03140 ade1 involved_in GO:0006189 GO_REF:0000041 IEA UniPathway:UPA00074 P phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03164 ura4 involved_in GO:0044205 GO_REF:0000041 IEA UniPathway:UPA00070 P orotidine 5'-phosphate decarboxylase Ura4 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03174 rbk1 involved_in GO:0019303 GO_REF:0000041 IEA UniPathway:UPA00916 P ribokinase Rbk1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03243 leu2 involved_in GO:0009098 GO_REF:0000041 IEA UniPathway:UPA00048 P 3-isopropylmalate dehydratase Leu2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03313 cut6 involved_in GO:2001295 GO_REF:0000041 IEA UniPathway:UPA00655 P acetyl-CoA/biotin carboxylase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03355 ade3 involved_in GO:0006189 GO_REF:0000041 IEA UniPathway:UPA00074 P phosphoribosylformylglycinamidine synthase Ade3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03398 SJAG_03398 involved_in GO:0000050 GO_REF:0000041 IEA UniPathway:UPA00158 P arginase (predicted) protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03672 gpi8 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-K protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03708 urk1 involved_in GO:0044211 GO_REF:0000041 IEA UniPathway:UPA00579 P uridine kinase/uracil phosphoribosyltransferase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03708 urk1 involved_in GO:0044206 GO_REF:0000041 IEA UniPathway:UPA00574 P uridine kinase/uracil phosphoribosyltransferase protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03739 SJAG_03739 involved_in GO:0006021 GO_REF:0000041 IEA UniPathway:UPA00823 P inositol monophosphatase-like protein protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03775 his4 involved_in GO:0000105 GO_REF:0000041 IEA UniPathway:UPA00031 P imidazoleglycerol-phosphate synthase His4 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03801 pbn1 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-X, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-X protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03914 shm2 involved_in GO:0035999 GO_REF:0000041 IEA UniPathway:UPA00193 P serine hydroxymethyltransferase Shm2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_03961 hem1 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P 5-aminolevulinate synthase Hem1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04054 glt1 involved_in GO:0097054 GO_REF:0000041 IEA UniPathway:UPA00634 P glutamate synthase (GOGAT) Glt1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04090 swp1 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P oligosaccharyltransferase compex delta subunit, Swp1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04098 ilv3 involved_in GO:0009099 GO_REF:0000041 IEA UniPathway:UPA00049 P dihydroxy-acid dehydratase Ilv3 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04109 hem12 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P uroporphyrinogen decarboxylase Hem12 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04119 gpi2 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-C protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04123 ada1 involved_in GO:0032264 GO_REF:0000041 IEA UniPathway:UPA00591 P adenosine deaminase Ada1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04145 alt1 involved_in GO:0042853 GO_REF:0000041 IEA UniPathway:UPA00528 P alanine aminotransferase Alt1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04307 idi1 involved_in GO:0050992 GO_REF:0000041 IEA UniPathway:UPA00059 P isopentenyl-diphosphate delta-isomerase Idi1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04627 hal3 involved_in GO:0006235 GO_REF:0000041 IEA UniPathway:UPA00575 P thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04728 gfa1 involved_in GO:0006048 GO_REF:0000041 IEA UniPathway:UPA00113 P glutamine-fructose-6-phosphate transaminase Gfa1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_04866 nmt1 involved_in GO:0009229 GO_REF:0000041 IEA UniPathway:UPA00060 P 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase Nmt1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_05024 cts1 involved_in GO:0044210 GO_REF:0000041 IEA UniPathway:UPA00159 P CTP synthase Cts1 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_05219 dpm2 involved_in GO:0006486 GO_REF:0000041 IEA UniPathway:UPA00378 P dolichol-phosphate mannosyltransferase regulatory subunit Dpm2 protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_05278 gpi17 involved_in GO:0006506 GO_REF:0000041 IEA UniPathway:UPA00196 P pig-S protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_05283 hem4 involved_in GO:0006782 GO_REF:0000041 IEA UniPathway:UPA00251 P uroporphyrinogen-III synthase Ups protein taxon:4897 20240129 UniProt
• WARNING - Violates GO Rule: GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed -- JaponicusDB SJAG_06635 ilv6 involved_in GO:0009099 GO_REF:0000041 IEA UniPathway:UPA00049 P acetolactate synthase regulatory subunit Ilv6 protein taxon:4897 20240129 UniProt

gorule-0000030

Obsolete GO_REFs are not allowed

• total: 0

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

• total: 0

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

• total: 0

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

• total: 0

gorule-0000043

Check for valid combination of evidence code and GO_REF

• total: 0

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 0

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

• total: 0

gorule-0000055

References should have only one ID per ID space

• total: 0

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

• total: 0

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 0

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

• total: 0

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

• total: 0

gorule-0000065

Annotations to term that are candidates for obsoletion should be removed

• total: 0

other

• total: 0

GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0034499 late endosome to Golgi transport IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0051999 mannosyl-inositol phosphorylceramide biosynthetic process IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0015770 sucrose transport AnnotationPropagation P GO:0008506 sucrose:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035350 FAD transmembrane transport AnnotationPropagation P GO:0015230 FAD transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0017121 plasma membrane phospholipid scrambling AnnotationPropagation P GO:0017128 phospholipid scramblase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0006325 chromatin organization AnnotationPropagation P GO:0140566 histone reader activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015386 potassium:proton antiporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000965 mitochondrial RNA 3'-end processing IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0045145 single-stranded DNA 5'-3' DNA exonuclease activity IBA
GO:0071934 thiamine transmembrane transport AnnotationPropagation P GO:0015234 thiamine transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071037 nuclear polyadenylation-dependent snRNA catabolic process IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IBA
GO:0006633 fatty acid biosynthetic process AnnotationPropagation P GO:0000036 acyl carrier activity IBA
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071038 TRAMP-dependent tRNA surveillance pathway IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006325 chromatin organization AnnotationPropagation P GO:0140566 histone reader activity IBA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0000064 L-ornithine transmembrane transporter activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016433 rRNA (adenine) methyltransferase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015662 P-type ion transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042054 histone methyltransferase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0001172 RNA-templated transcription AnnotationPropagation P GO:0003968 RNA-directed RNA polymerase activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0035673 oligopeptide transmembrane transporter activity IBA
GO:1990569 UDP-N-acetylglucosamine transmembrane transport AnnotationPropagation P GO:0005462 UDP-N-acetylglucosamine transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046975 histone H3K36 methyltransferase activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0043504 mitochondrial DNA repair IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0001676 long-chain fatty acid metabolic process AnnotationPropagation P GO:0004467 long-chain fatty acid-CoA ligase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0000014 single-stranded DNA endodeoxyribonuclease activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0008469 histone arginine N-methyltransferase activity IBA
GO:1901962 S-adenosyl-L-methionine transmembrane transport AnnotationPropagation P GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140750 nucleosome array spacer activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0016020 membrane AnnotationPropagation C GO:0030148 sphingolipid biosynthetic process IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0006506 GPI anchor biosynthetic process IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0140053 mitochondrial gene expression IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:1903710 spermine transmembrane transport AnnotationPropagation P GO:0000297 spermine transmembrane transporter activity IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0033862 UMP kinase activity IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0052907 23S rRNA (adenine(1618)-N(6))-methyltransferase activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071028 nuclear mRNA surveillance IBA
GO:0016020 membrane AnnotationPropagation C GO:0046513 ceramide biosynthetic process IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA