Table of contents

Summary

GAF summary

Found 47260 annotations in 47272 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000001 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000001) Basic GAF checks, there is one violation with type Error.

For rule GO_AR:0000011 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000011) ND annotations to root nodes only, there are 22 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 2 violations with type Warning.

For rule GO_AR:0000006 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000006) IEP usage is restricted to terms from the Biological Process ontology, there are 61 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 2 violations with type Warning.

For rule GO_AR:0000013 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000013) Taxon-appropriate annotation check, there is one violation with type Warning.

GAF Prediction Summary

Found 142 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

Group: gramene - Dataset: gramene_oryza

SUMMARY

This report generated on 2018-10-19

Contents

gorule-0000008

gorule-0000016

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000027

gorule-0000029

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000016

With/From: IC annotations require a With/From GO ID

Messages