Table of contents

Summary

GAF Parser Summary

There are 10 GAF parser warnings.

GAF summary

Found 1164 annotations in 1173 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000001 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000001) Basic GAF checks, there are 4 violations with type Error.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there are 11 violations with type Error.

For rule GO_AR:0000007 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000007) IPI should not be used with catalytic activity molecular function terms, there is one violation with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 6 violations with type Warning.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there are 29 violations with type Warning.

GAF Prediction Summary

Found 87 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

SUMMARY

STATISTICS

MESSAGES

ERROR

WARNING

OWLTools check

#Line number RuleID ViolationType Message Line
#------------
# GAF Parser ERROR count: 0
#------------
# GAF Parser WARNING count: 10
16 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB Q08698 nrdE Contributes_to GO:0004748 PMID:7809142 IDA F protein taxon:90371 20100519 GONUTS
502 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P68871 HBB Contributes_to GO:0031720 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS
504 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P68871 HBB Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS
524 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69905 HBA2 Contributes_to GO:0031720 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS
526 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69905 HBA2 Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS
546 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P00738 HP Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS
845 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P14565 traI Contributes_to GO:0004520 PMID:7499339 IDA F protein taxon:83333 20110517 GONUTS
1014 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P76014 dhaL Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS
1017 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P37349 dhaM Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS
1018 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P76015 dhaK Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS
#------------
#------------
# Validation for #1164 annotations in 1173 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000001 Basic GAF checks Error count: 4
725 GO_AR:0000001 Error IEA evidence code present with a date more than a year old '20110217' UniProtKB P29430 pedA GO:0042742 GO_REF:0000004 IEA SP_KW:KW-0044 P protein taxon:1254 20110217 GONUTS
949 GO_AR:0000001 Error IEA evidence code present with a date more than a year old '20110330' UniProtKB Q9QWR8 Naga GO:0008456 GO_REF:0000003 IEA EC:3.2.1.49 F protein taxon:10090 20110330 GONUTS
1066 GO_AR:0000001 Error IEA evidence code present with a date more than a year old '20110417' UniProtKB P0ACS2 soxR GO:0006979 GO_REF:0000002 IEA InterPro:IPR010211 P protein taxon:83333 20110417 GONUTS
1130 GO_AR:0000001 Error IEA evidence code present with a date more than a year old '20110417' UniProtKB Q08638 bglA GO:0000272 GO_REF:0000004 IEA SP_KW:KW-0624 P protein taxon:2336 20110417 GONUTS
#------------
# GO_AR:0000014 Valid GO term ID Error count: 11
499 GO_AR:0000014 Error The id 'GO:0003706' in the annotation is an obsolete class UniProtKB P55055 NR1H2 GO:0003706 PMID:11090131 IDA F protein taxon:9606 20110115 GONUTS
508 GO_AR:0000014 Error The id 'GO:0035121' in the annotation is an obsolete class UniProtKB P22607 FGFR3 GO:0035121 PMID:20582225 IMP P protein taxon:9606 20101212 GONUTS
541 GO_AR:0000014 Error The id 'GO:0003706' in the annotation is an obsolete class UniProtKB Q13133 NR1H3 GO:0003706 PMID:11090131 IDA F protein taxon:9606 20110115 GONUTS
598 GO_AR:0000014 Error The id 'GO:0019861' in the annotation is an obsolete class UniProtKB P46869 FLA10 GO:0019861 PMID:16527740 IDA C protein taxon:3055 20110114 GONUTS
599 GO_AR:0000014 Error The id 'GO:0019861' in the annotation is an obsolete class UniProtKB Q9SMH5 DHC1B GO:0019861 PMID:16527740 IDA C protein taxon:3055 20110114 GONUTS
603 GO_AR:0000014 Error The id 'GO:0019861' in the annotation is an obsolete class UniProtKB Q7XA07 D1BLIC GO:0019861 PMID:16527740 IDA C protein taxon:3055 20110119 GONUTS
634 GO_AR:0000014 Error The id 'GO:0008634' in the annotation is an obsolete class UniProtKB O95238 SPDEF GO:0008634 PMID:21229552 IDA P protein taxon:9606 20110116 GONUTS
705 GO_AR:0000014 Error The id 'GO:0070215' in the annotation is an obsolete class, suggested replacements: GO:0097371 UniProtKB P02340 Tp53 GO:0070215 PMID:20818388 IPI UniProtKB:P23804 F protein taxon:10090 20110121 GONUTS
853 GO_AR:0000014 Error The id 'GO:2000154' in the annotation is an obsolete class UniProtKB P0A6X7 ihfA NOT GO:2000154 PMID:12686630 IMP P protein taxon:83333 20110415 GONUTS
1037 GO_AR:0000014 Error The id 'GO:0006184' in the annotation is an obsolete class UniProtKB Q53770 tetM GO:0006184 PMID:7826010 EXP P protein taxon:1280 20110416 GONUTS
1152 GO_AR:0000014 Error The id 'GO:0045885' in the annotation is an obsolete class UniProtKB P49450 CENPA GO:0045885 PMID:21423629 IMP P protein taxon:9606 20110417 GONUTS
#------------
# GO_AR:0000007 IPI should not be used with catalytic activity molecular function terms Warning count: 1
534 GO_AR:0000007 Warning IPI should not be used with catalytic activity molecular function terms UniProtKB Q9DBH0 Wwp2 GO:0004842 PMID:15047715 IPI UniProtKB:P20263 F protein taxon:10090 20101213 GONUTS
#------------
# GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 6
194 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A261 tsx GO:0006810 PMID:9043137 IMP P protein taxon:90371 20110414 GONUTS
257 GO_AR:0000008 Warning Do not annotate to: GO:0006950 'response to stress' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB Q38845 PP2AA1 GO:0006950 PMID:18162590 IMP P protein taxon:3702 20101021 GONUTS
365 GO_AR:0000008 Warning Do not annotate to: GO:0040007 'growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P36581 cal1 NOT GO:0040007 PMID:19351719 IMP P protein taxon:284812 20101123 GONUTS
902 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A6A3 ackA GO:0042710 PMID:12753190 IMP P protein taxon:83333 20110923 GONUTS
998 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P0ACA3 sspA GO:0001101 PMID:15819627 IMP P protein taxon:83333 20110412 GONUTS
1004 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P76085 paaK GO:0008152 PMID:9748275 IMP P protein taxon:83333 20110412 GONUTS
#------------
# GO_AR:0000014 Valid GO term ID Warning count: 29
121 GO_AR:0000014 Warning The id 'GO:0035413' in the annotation is an alternate id for: GO:0090263 UniProtKB P56704 WNT3A GO:0035413 PMID:20723538 IDA P protein taxon:9606 20101214 GONUTS
149 GO_AR:0000014 Warning The id 'GO:0035083' in the annotation is an alternate id for: GO:0035082 UniProtKB Q1LV15 wdr69 GO:0035083 PMID:20568242 IMP P protein taxon:7955 20100924 GONUTS
219 GO_AR:0000014 Warning The id 'GO:0005932' in the annotation is an alternate id for: GO:0036064 UniProtKB Q8TAM1 BBS10 GO:0005932 PMID:19190184 IDA C protein taxon:9606 20101130 GONUTS
220 GO_AR:0000014 Warning The id 'GO:0042384' in the annotation is an alternate id for: GO:0060271 UniProtKB Q8TAM1 BBS10 GO:0042384 PMID:19190184 IMP P protein taxon:9606 20100926 GONUTS
223 GO_AR:0000014 Warning The id 'GO:0005932' in the annotation is an alternate id for: GO:0036064 UniProtKB Q6ZW61 BBS12 GO:0005932 PMID:19190184 IDA C protein taxon:9606 20101130 GONUTS
225 GO_AR:0000014 Warning The id 'GO:0042384' in the annotation is an alternate id for: GO:0060271 UniProtKB Q6ZW61 BBS12 GO:0042384 PMID:19190184 IMP P protein taxon:9606 20101010 GONUTS
301 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 UniProtKB P07013 priB GO:0043234 PMID:8663104 IPI UniProtKB:P0A8J2|UniProtKB:P0ACB0|UniProtKB:P0AEF0|UniProtKB:P17888 C protein taxon:83333 20101107 GONUTS
318 GO_AR:0000014 Warning The id 'GO:0006916' in the annotation is an alternate id for: GO:0043066 UniProtKB Q02858 Tek GO:0006916 PMID:16219799 IMP P protein taxon:10090 20101025 GONUTS
382 GO_AR:0000014 Warning The id 'GO:0006916' in the annotation is an alternate id for: GO:0043066 UniProtKB O30916 sopB GO:0006916 PMID:15642738 IMP P protein taxon:90371 20110414 GONUTS
395 GO_AR:0000014 Warning The id 'GO:0042787' in the annotation is an alternate id for: GO:0006511 UniProtKB P51965 UBE2E1 GO:0042787 PMID:18439907 IMP P protein taxon:9606 20101124 GONUTS
409 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 UniProtKB P0A8J2 dnaT GO:0043234 PMID:8663104 IPI UniProtKB:P07013|UniProtKB:P0ACB0|UniProtKB:P0AEF0|UniProtKB:P17888 C protein taxon:83333 20101105 GONUTS
414 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 UniProtKB P17888 priA GO:0043234 PMID:8663104 IPI UniProtKB:P07013|UniProtKB:P0A8J2|UniProtKB:P0ACB0|UniProtKB:P0AEF0 C protein taxon:83333 20101105 GONUTS
441 GO_AR:0000014 Warning The id 'GO:0032863' in the annotation is an alternate id for: GO:0090630 UniProtKB Q99LJ8 Nus1 GO:0032863 PMID:19805174 IMP P protein taxon:10090 20101107 GONUTS
447 GO_AR:0000014 Warning The id 'GO:0006916' in the annotation is an alternate id for: GO:0043066 UniProtKB Q3TCH7 Cul4a GO:0006916 PMID:18339895 IMP P protein taxon:10090 20101107 GONUTS
473 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 UniProtKB P0ACB0 dnaB GO:0043234 PMID:8663104 IPI UniProtKB:P07013|UniProtKB:P0A8J2|UniProtKB:P0AEF0|UniProtKB:P17888 C protein taxon:83333 20101107 GONUTS
475 GO_AR:0000014 Warning The id 'GO:0043234' in the annotation is an alternate id for: GO:0032991 UniProtKB P0AEF0 dnaC GO:0043234 PMID:8663104 IPI UniProtKB:P07013|UniProtKB:P0A8J2|UniProtKB:P0ACB0|UniProtKB:P17888 C protein taxon:83333 20101107 GONUTS
543 GO_AR:0000014 Warning The id 'GO:0043088' in the annotation is an alternate id for: GO:0043087 UniProtKB O14907 TAX1BP3 GO:0043088 PMID:21139582 IDA P protein taxon:9606 20101215 GONUTS
547 GO_AR:0000014 Warning The id 'GO:0035413' in the annotation is an alternate id for: GO:0090263 UniProtKB P97299 Sfrp2 GO:0035413 PMID:20723538 IDA P protein taxon:10090 20101214 GONUTS
571 GO_AR:0000014 Warning The id 'GO:0043088' in the annotation is an alternate id for: GO:0043087 UniProtKB P03126 E6 GO:0043088 PMID:21139582 IDA P protein taxon:333760 20101215 GONUTS
573 GO_AR:0000014 Warning The id 'GO:0001105' in the annotation is an alternate id for: GO:0003713 UniProtKB P70662 Ldb1 GO:0001105 PMID:20570862 IMP F protein taxon:10090 20101215 GONUTS
639 GO_AR:0000014 Warning The id 'GO:0090004' in the annotation is an alternate id for: GO:1903078 UniProtKB P0C605 Prkg1 GO:0090004 PMID:19127022 IDA P protein taxon:10090 20110120 GONUTS
640 GO_AR:0000014 Warning The id 'GO:0042511' in the annotation is an alternate id for: GO:0042531 UniProtKB P17777 Lif GO:0042511 PMID:20624457 IDA P protein taxon:10116 20110116 GONUTS
641 GO_AR:0000014 Warning The id 'GO:0042517' in the annotation is an alternate id for: GO:0042531 UniProtKB P17777 Lif GO:0042517 PMID:20624457 IDA P protein taxon:10116 20110116 GONUTS
644 GO_AR:0000014 Warning The id 'GO:0042511' in the annotation is an alternate id for: GO:0042531 UniProtKB P01581 Ifng GO:0042511 PMID:20624457 IDA P protein taxon:10116 20110116 GONUTS
685 GO_AR:0000014 Warning The id 'GO:0032403' in the annotation is an alternate id for: GO:0044877 UniProtKB Q6IMN6 CAPRIN2 GO:0032403 PMID:18762581 IPI UniProtKB:O15169|UniProtKB:O75197 F protein taxon:9606 20110121 GONUTS
961 GO_AR:0000014 Warning The id 'GO:0006916' in the annotation is an alternate id for: GO:0043066 UniProtKB Q96JZ2 HSH2D GO:0006916 PMID:15569688 IDA P protein taxon:9606 20110402 GONUTS
977 GO_AR:0000014 Warning The id 'GO:0031513' in the annotation is an alternate id for: GO:0097730 UniProtKB Q9HBA0 TRPV4 GO:0031513 PMID:18024594 IDA C protein taxon:9606 20110601 GONUTS
981 GO_AR:0000014 Warning The id 'GO:0032862' in the annotation is an alternate id for: GO:0090630 UniProtKB O52623 sopE GO:0032862 PMID:9630225 IDA P protein taxon:90371 20110411 GONUTS
1097 GO_AR:0000014 Warning The id 'GO:0030529' in the annotation is an alternate id for: GO:1990904 UniProtKB Q9M5P4 CRS2 GO:0030529 PMID:11179231 IDA C protein taxon:4577 20110416 GONUTS
#------------

Predictions

GO:0016310 phosphorylation AnnotationPropagation P GO:0009029 tetraacyldisaccharide 4'-kinase activity IMP
GO:0015904 tetracycline transport AnnotationPropagation P GO:0008493 tetracycline transmembrane transporter activity ISS
GO:0006855 drug transmembrane transport AnnotationPropagation P GO:0008493 tetracycline transmembrane transporter activity ISS
GO:0098656 anion transmembrane transport AnnotationPropagation P GO:0008493 tetracycline transmembrane transporter activity ISS
GO:0006470 protein dephosphorylation AnnotationPropagation P GO:0008138 protein tyrosine/serine/threonine phosphatase activity IDA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IDA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IDA
GO:0022900 electron transport chain AnnotationPropagation P GO:0009055 electron transfer activity IMP
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0004673 protein histidine kinase activity IMP
GO:0032259 methylation AnnotationPropagation P GO:0004851 uroporphyrin-III C-methyltransferase activity ISS
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004797 thymidine kinase activity IMP
GO:0009165 nucleotide biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IMP
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IMP
GO:0005622 intracellular AnnotationPropagation C GO:0042073 intraciliary transport IDA
GO:0005623 cell AnnotationPropagation C GO:0042073 intraciliary transport IDA
GO:0005929 cilium AnnotationPropagation C GO:0042073 intraciliary transport IDA
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity ISM
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004450 isocitrate dehydrogenase (NADP+) activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008942 nitrite reductase [NAD(P)H] activity ISS
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IMP
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity IDA
GO:0016310 phosphorylation AnnotationPropagation P GO:0004618 phosphoglycerate kinase activity IMP
GO:0005622 intracellular AnnotationPropagation C GO:0000160 phosphorelay signal transduction system IDA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004709 MAP kinase kinase kinase activity IDA
GO:0000186 activation of MAPKK activity AnnotationPropagation P GO:0004709 MAP kinase kinase kinase activity IDA
GO:0005622 intracellular AnnotationPropagation C GO:0000160 phosphorelay signal transduction system IMP
GO:0016310 phosphorylation AnnotationPropagation P GO:0016301 kinase activity IDA
GO:0006508 proteolysis AnnotationPropagation P GO:0004175 endopeptidase activity IDA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity ISA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IMP
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IMP
GO:0061615 glycolytic process through fructose-6-phosphate AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IMP
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IMP
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004096 catalase activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IDA
GO:0001172 transcription, RNA-templated AnnotationPropagation P GO:0003968 RNA-directed 5'-3' RNA polymerase activity IGI
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IMP
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004497 monooxygenase activity EXP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008940 nitrate reductase activity IGI
GO:0015768 maltose transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IMP
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IMP
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0005622 intracellular AnnotationPropagation C GO:0045022 early endosome to late endosome transport IMP
GO:0005623 cell AnnotationPropagation C GO:0045022 early endosome to late endosome transport IMP
GO:0005829 cytosol AnnotationPropagation C GO:0045022 early endosome to late endosome transport IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008888 glycerol dehydrogenase [NAD+] activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008940 nitrate reductase activity IMP
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0004673 protein histidine kinase activity IDA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IDA
GO:0005623 cell AnnotationPropagation C GO:0035356 cellular triglyceride homeostasis IMP
GO:1903506 regulation of nucleic acid-templated transcription AnnotationPropagation P GO:0003712 transcription coregulator activity IMP
GO:1901998 toxin transport AnnotationPropagation P GO:0019534 toxin transmembrane transporter activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0019534 toxin transmembrane transporter activity IMP
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0016209 antioxidant activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IMP
GO:0098793 presynapse AnnotationPropagation C GO:0051583 dopamine uptake involved in synaptic transmission IMP
GO:0005623 cell AnnotationPropagation C GO:0051583 dopamine uptake involved in synaptic transmission IMP
GO:0018108 peptidyl-tyrosine phosphorylation AnnotationPropagation P GO:0005006 epidermal growth factor-activated receptor activity IMP
GO:0007173 epidermal growth factor receptor signaling pathway AnnotationPropagation P GO:0005006 epidermal growth factor-activated receptor activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0016491 oxidoreductase activity IDA
GO:0005622 intracellular AnnotationPropagation C GO:0000160 phosphorelay signal transduction system ISA
GO:0006508 proteolysis AnnotationPropagation P GO:0008237 metallopeptidase activity IDA
GO:0006508 proteolysis AnnotationPropagation P GO:0008235 metalloexopeptidase activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008942 nitrite reductase [NAD(P)H] activity IMP
GO:0005622 intracellular AnnotationPropagation C GO:0035556 intracellular signal transduction IEP
GO:0005623 cell AnnotationPropagation C GO:0035356 cellular triglyceride homeostasis IMP
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IDA
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:0004520 endodeoxyribonuclease activity IDA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IDA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IDA
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0004345 glucose-6-phosphate dehydrogenase activity IMP
GO:0097339 glycolate transmembrane transport AnnotationPropagation P GO:0043879 glycolate transmembrane transporter activity IGI
GO:0006479 protein methylation AnnotationPropagation P GO:0008276 protein methyltransferase activity IMP
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008863 formate dehydrogenase (NAD+) activity IGI
GO:0006355 regulation of transcription, DNA-templated AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0097339 glycolate transmembrane transport AnnotationPropagation P GO:0043879 glycolate transmembrane transporter activity IGI
GO:0055114 oxidation-reduction process AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity ISS
GO:0032259 methylation AnnotationPropagation P GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IMP

Predictions (experimental)