#Line number RuleID ViolationType Message Line #------------ # GAF Parser ERROR count: 0 #------------ # GAF Parser WARNING count: 10 23 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB Q08698 nrdE Contributes_to GO:0004748 PMID:7809142 IDA F protein taxon:90371 20100519 GONUTS 506 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P68871 HBB Contributes_to GO:0031720 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS 508 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P68871 HBB Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS 527 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69905 HBA2 Contributes_to GO:0031720 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS 529 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P69905 HBA2 Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS 548 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P00738 HP Contributes_to GO:0004601 PMID:19740759 IDA F protein taxon:9606 20101214 GONUTS 841 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P14565 traI Contributes_to GO:0004520 PMID:7499339 IDA F protein taxon:83333 20110517 GONUTS 1008 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P76014 dhaL Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS 1011 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P37349 dhaM Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS 1012 WARNING Repairing qualifier 'contributes_to' from: Contributes_to UniProtKB P76015 dhaK Contributes_to GO:0016740 PMID:11350937 IDA F protein taxon:83333 20110524 GONUTS #------------ #------------ # Validation for #1146 annotations in 1162 lines #------------ #Line number RuleID ViolationType Message Line #------------ # GO_AR:0000007 IPI should not be used with catalytic activity molecular function terms Warning count: 1 537 GO_AR:0000007 Warning IPI should not be used with catalytic activity molecular function terms UniProtKB Q9DBH0 Wwp2 GO:0004842 PMID:15047715 IPI UniProtKB:P20263 F protein taxon:10090 20101213 GONUTS #------------ # GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 7 183 GO_AR:0000008 Warning Do not annotate to: GO:0005215 'transporter activity' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P37409 btuB GO:0005215 PMID:1448622 IMP F protein taxon:90371 20110414 GONUTS 200 GO_AR:0000008 Warning Do not annotate to: GO:0006810 'transport' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A261 tsx GO:0006810 PMID:9043137 IMP P protein taxon:90371 20110414 GONUTS 263 GO_AR:0000008 Warning Do not annotate to: GO:0006950 'response to stress' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB Q38845 PP2AA1 GO:0006950 PMID:18162590 IMP P protein taxon:3702 20101021 GONUTS 371 GO_AR:0000008 Warning Do not annotate to: GO:0040007 'growth' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P36581 cal1 NOT GO:0040007 PMID:19351719 IMP P protein taxon:284812 20101123 GONUTS 897 GO_AR:0000008 Warning Do not annotate to: GO:0042710 'biofilm formation' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P0A6A3 ackA GO:0042710 PMID:12753190 IMP P protein taxon:83333 20110923 GONUTS 992 GO_AR:0000008 Warning Do not annotate to: GO:0001101 'response to acid chemical' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P0ACA3 sspA GO:0001101 PMID:15819627 IMP P protein taxon:83333 20110412 GONUTS 998 GO_AR:0000008 Warning Do not annotate to: GO:0008152 'metabolic process' The term is considered to high level, as marked via the subset tag: gocheck_do_not_manually_annotate UniProtKB P76085 paaK GO:0008152 PMID:9748275 IMP P protein taxon:83333 20110412 GONUTS #------------