• Summary (original)
• Report (original)
• OWLTools check (original)
• Predictions (original)
• Predictions (experimental) (original)

GAF summary

Found 39981 annotations in 40000 lines.

GAF Validation Summary

No errors, warnings, or recommendations to report.

Used Ontology Summary

go/extensions/go-gaf

GAF Prediction Summary

Found 3 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Group: goa - Dataset: goa_pig_isoform

SUMMARY

This report generated on 2019-04-23

• Associations: 39981
• Lines in file (incl headers): 52249
• Lines skipped: 12256

Header From Original Association File

!gaf-version: 2.1
!
!The set of protein accessions included in this file is based on UniProt complete proteomes, which may provide more than one protein per gene.
!They include all Swiss-Prot entries for the species plus any TrEMBL entries that have an Ensembl DR line. The TrEMBL entries are likely to overlap with the Swiss-Prot entries or their isoforms.
!If a particular protein accession is not annotated with GO, then it will not appear in this file.
!
!Note that the annotation set in this file is filtered in order to reduce redundancy; the full, unfiltered set can be found in
!ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/goa_uniprot_all.gaf.gz
!
!Generated: 2019-04-08 12:03
!GO-version: http://purl.obolibrary.org/obo/go/releases/2019-03-29/extensions/go-plus.owl
!

Contents

gorule-0000008

gorule-0000020

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 15

Messages

• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A286ZS46 SLCO4A1 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO4A1 protein taxon:9823 20190406 InterPro UniProtKB:A0A287A0K8
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A286ZS46 SLCO4A1 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO4A1 protein taxon:9823 20190406 InterPro UniProtKB:A0A287BCA8
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287AMW1 MFSD14A GO:0005215 GO_REF:0000002 IEA InterPro:IPR001958|InterPro:IPR005829 F Uncharacterized protein MFSD14A protein taxon:9823 20190406 InterPro UniProtKB:F1S559
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287AMW1 MFSD14A GO:0005215 GO_REF:0000002 IEA InterPro:IPR001958|InterPro:IPR005829 F Uncharacterized protein MFSD14A protein taxon:9823 20190406 InterPro UniProtKB:I3LPM4
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287AXW9 SLC13A3 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A3 protein taxon:9823 20190406 InterPro UniProtKB:A0A286ZXQ1
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287AXW9 SLC13A3 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A3 protein taxon:9823 20190406 InterPro UniProtKB:A0A287A374
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287AXW9 SLC13A3 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A3 protein taxon:9823 20190406 InterPro UniProtKB:A0A287ADP3
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB A0A287BR67 SLC17A9 GO:0005215 GO_REF:0000002 IEA InterPro:IPR005829 F Uncharacterized protein SLC17A9 protein taxon:9823 20190406 InterPro UniProtKB:A0A286ZVG6
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1RGN5 SLC13A5 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A5 protein taxon:9823 20190406 InterPro UniProtKB:A0A286ZZ45
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1RGN5 SLC13A5 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A5 protein taxon:9823 20190406 InterPro UniProtKB:A0A287ALD3
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1SCI1 SLCO3A1 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO3A1 protein taxon:9823 20190406 InterPro UniProtKB:A0A286ZM62
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1SCI1 SLCO3A1 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO3A1 protein taxon:9823 20190406 InterPro UniProtKB:A0A287ASP2
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1SNI6 SLC13A4 GO:0005215 GO_REF:0000002 IEA InterPro:IPR001898 F Uncharacterized protein SLC13A4 protein taxon:9823 20190406 InterPro UniProtKB:A0A287AYS7
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1SQZ6 SLCO1A2 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO1A2 protein taxon:9823 20190406 InterPro UniProtKB:A0A287AM41
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms (GO:0005215) -- UniProtKB F1SQZ6 SLCO1A2 GO:0005215 GO_REF:0000002 IEA InterPro:IPR004156 F Solute carrier organic anion transporter family member SLCO1A2 protein taxon:9823 20190406 InterPro UniProtKB:A0A287AYE5

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 13

Messages

• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A286ZN56 SEC62 GO:0008565 PMID:21873635 IBA PANTHER:PTN000278138|SGD:S000006015 F Uncharacterized protein SEC62 protein taxon:9823 20181116 GO_Central UniProtKB:I3LND2
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A286ZPI7 VPS26C GO:0008565 PMID:21873635 IBA PANTHER:PTN000260563|SGD:S000003589 F Uncharacterized protein VPS26C protein taxon:9823 20170228 GO_Central UniProtKB:F1SGV6
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A287A110 AFTPH GO:0008565 PMID:21873635 IBA FB:FBgn0038223|PANTHER:PTN001043950 F Uncharacterized protein AFTPH protein taxon:9823 20181004 GO_Central UniProtKB:I3LNU3
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A287AXL5 TNPO3 GO:0008565 PMID:21873635 IBA PANTHER:PTN000270925|SGD:S000002984 F Uncharacterized protein TNPO3 protein taxon:9823 20170228 GO_Central UniProtKB:F1SMQ0
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A287B2B4 IPO7 GO:0008565 PMID:21873635 IBA MGI:MGI:2442377|PANTHER:PTN000108134|SGD:S000002803|SGD:S000003210|SGD:S000003893|SGD:S000006046|UniProtKB:Q96P70 F Uncharacterized protein IPO7 protein taxon:9823 20170228 GO_Central UniProtKB:I3LDM3
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A287B6U5 VPS29 contributes_to GO:0008565 PMID:21873635 IBA PANTHER:PTN000122547|SGD:S000001054 F Vacuolar protein sorting-associated protein 29 VPS29 protein taxon:9823 20170228 GO_Central UniProtKB:F1RNN0
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB A0A287BIG4 AP2S1 GO:0008565 GO_REF:0000002 IEA InterPro:IPR027156 F AP complex subunit sigma AP2S1 protein taxon:9823 20190406 InterPro UniProtKB:I3LG98
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB F1RFG5 XPO6 GO:0008565 GO_REF:0000002 IEA InterPro:IPR040016 F Uncharacterized protein XPO6 protein taxon:9823 20190406 InterPro UniProtKB:A0A286ZTA7
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB F1RTU5 KPNA5 GO:0008565 PMID:21873635 IBA MGI:MGI:1100836|PANTHER:PTN000593662|SGD:S000005133|WB:WBGene00002072 F Importin subunit alpha KPNA5 protein taxon:9823 20170922 GO_Central UniProtKB:I3LUT7
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB F1RVP5 UNC93B1 GO:0008565 PMID:21873635 IBA MGI:MGI:1859307|PANTHER:PTN002928790 F Uncharacterized protein UNC93B1 protein taxon:9823 20180816 GO_Central UniProtKB:I3LEA8
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB I3LEH3 COG3 GO:0008565 PMID:21873635 IBA PANTHER:PTN000329506|SGD:S000000959|UniProtKB:Q96JB2 F Uncharacterized protein COG3 protein taxon:9823 20170228 GO_Central UniProtKB:I3L924
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB I3LNF6 IPO13 GO:0008565 PMID:21873635 IBA PANTHER:PTN000270925|SGD:S000002984 F Uncharacterized protein IPO13 protein taxon:9823 20170228 GO_Central UniProtKB:I3LVG1
• WARNING - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0008565) -- UniProtKB I3LPP4 CSE1L GO:0008565 PMID:21873635 IBA MGI:MGI:2442377|PANTHER:PTN000108134|SGD:S000002803|SGD:S000003210|SGD:S000003893|SGD:S000006046|UniProtKB:Q96P70 F Uncharacterized protein CSE1L protein taxon:9823 20170228 GO_Central UniProtKB:I3L918

other

• total: 0

#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #39981 annotations in 40000 lines
#------------
# No errors, warnings, or recommendations to report.

GO:0043657 host cell AnnotationPropagation C GO:0075733 intracellular transport of virus IMP
GO:0010466 negative regulation of peptidase activity AnnotationPropagation P GO:0030414 peptidase inhibitor activity IDA
GO:2000116 regulation of cysteine-type endopeptidase activity FoldBasedPredictor GO:0010447 response to acidic pH regulates GO:0004197 cysteine-type endopeptidase activity IDA