Table of contents

Summary

GAF summary

Found 45535 annotations in 45554 lines.

GAF Validation Summary

No errors, warnings, or recommendations to report.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-09-13/extensions/go-gaf.owl

GAF Prediction Summary

Found 2 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-09-13/extensions/go-gaf.owl

Report

Group: goa - Dataset: goa_pig_isoform

SUMMARY

This report generated on 2019-09-16

Header From Original Association File

!gaf-version: 2.1
!
!The set of protein accessions included in this file is based on UniProt complete proteomes, which may provide more than one protein per gene.
!They include all Swiss-Prot entries for the species plus any TrEMBL entries that have an Ensembl DR line. The TrEMBL entries are likely to overlap with the Swiss-Prot entries or their isoforms.
!If a particular protein accession is not annotated with GO, then it will not appear in this file.
!
!Note that the annotation set in this file is filtered in order to reduce redundancy; the full, unfiltered set can be found in
!ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/goa_uniprot_all.gaf.gz
!
!Generated: 2019-07-29 13:54
!GO-version: http://purl.obolibrary.org/obo/go/releases/2019-07-17/extensions/go-plus.owl
!

Contents

gorule-0000020

gorule-0000033

other

MESSAGES

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000033

Public Reference IDs (PMID, PMC, doi, or GO_REF) should be preferred over group specific Reference IDs

Messages

other

OWLTools check

#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #45535 annotations in 45554 lines
#------------
# No errors, warnings, or recommendations to report.

Predictions

GO:0043657 host cell AnnotationPropagation C GO:0075733 intracellular transport of virus IMP
GO:2000116 regulation of cysteine-type endopeptidase activity FoldBasedPredictor GO:0010447 response to acidic pH regulates GO:0004197 cysteine-type endopeptidase activity IDA

Predictions (experimental)