• Report (original)
• Predictions (original)
• Predictions (experimental) (original)

Group: goa - Dataset: goa_human_rna

SUMMARY

This report generated on 2024-05-05

• Associations: 54838
• Lines in file (incl headers): 54858
• Lines skipped: 11

Header From Original Association File

!gaf-version: 2.2
!
!Note that the annotation set in this file is filtered in order to reduce redundancy; the full, unfiltered set can be found in
!ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/goa_uniprot_all.gaf.gz
!
!date-generated: 2024-04-16 15:27
!generated-by: UniProt
!go-version: http://purl.obolibrary.org/obo/go/releases/2024-04-13/extensions/go-plus.owl
!

Contents

gorule-0000002

gorule-0000005

gorule-0000006

gorule-0000007

gorule-0000008

gorule-0000011

gorule-0000013

gorule-0000015

gorule-0000016

gorule-0000017

gorule-0000018

gorule-0000020

gorule-0000028

gorule-0000029

gorule-0000030

gorule-0000037

gorule-0000039

gorule-0000042

gorule-0000043

gorule-0000046

gorule-0000050

gorule-0000055

gorule-0000058

gorule-0000061

gorule-0000063

gorule-0000064

other

MESSAGES

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

• total: 0

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 0

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

• total: 0

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

• total: 0

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 110

Messages

• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000003FD55_9606 URS000003FD55_9606 involved_in GO:0010951 PMID:24352696 IDA P Homo sapiens (human) hsa-miR-339-5p miRNA taxon:9606 20200720 ARUK-UCL has_input(UniProtKB:P56817),causally_upstream_of(GO:1902430)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000005A8ED_9606 URS000005A8ED_9606 involved_in GO:0032410 PMID:28411377 IMP P Homo sapiens (human) hsa-miR-495-3p miRNA taxon:9606 20210518 ARUK-UCL has_input(UniProtKB:P08183),causally_upstream_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000005CF5F_9606 URS000005CF5F_9606 involved_in GO:1903817 PMID:27180889 IDA P Homo sapiens (human) hsa-miR-30d-5p miRNA taxon:9606 20210326 BHF-UCL part_of(GO:0060306),has_input(UniProtKB:P48549),occurs_in(CL:0002129)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000068B85_9606 URS0000068B85_9606 involved_in GO:1903817 GO_REF:0000024 ISS RNAcentral:URS0000068B85_10116 P Homo sapiens (human) hsa-miR-153-3p miRNA taxon:9606 20161109 BHF-UCL occurs_in(UBERON:0005616)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000009262D_9606 URS000009262D_9606 acts_upstream_of GO:0032088 PMID:25327529 IGI UniProtKB:P01584 P Homo sapiens (human) hsa-miR-21-3p miRNA taxon:9606 20191118 BHF-UCL has_input(UniProtKB:Q04206),occurs_in(CL:0002544)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00000A939F_9606 URS00000A939F_9606 involved_in GO:0032410 PMID:25714665 IDA P Homo sapiens (human) hsa-miR-326 miRNA taxon:9606 20211104 ARUK-UCL has_input(UniProtKB:P33527),causally_upstream_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00000C7662_9606 URS00000C7662_9606 involved_in GO:1901842 PMID:28239561 NAS P Homo sapiens (human) hsa-miR-499a-5p miRNA taxon:9606 20210326 BHF-UCL occurs_in(UBERON:0002081)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00000E5433_9606 URS00000E5433_9606 involved_in GO:1901386 PMID:27545043 IDA P Homo sapiens (human) hsa-miR-208a-3p miRNA taxon:9606 20210326 BHF-UCL part_of(GO:1905949),occurs_in(CL:0002129)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001230A0_9606 URS00001230A0_9606 acts_upstream_of GO:0043433 PMID:30692230 IDA P Homo sapiens (human) hsa-miR-101-3p miRNA taxon:9606 20200317 DIBU has_input(UniProtKB:O60315)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000013D17D_9606 URS000013D17D_9606 involved_in GO:0051091 GO_REF:0000024 ISS RNAcentral:URS000013D17D_10116 P Homo sapiens (human) hsa-miR-19b-3p miRNA taxon:9606 20170807 BHF-UCL occurs_in(UBERON:0007221),positively_regulates(GO:0061049),has_input(PR:000003112)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000013D17D_9606 URS000013D17D_9606 involved_in GO:1900004 PMID:24998411 IDA P Homo sapiens (human) hsa-miR-19b-3p miRNA taxon:9606 20201130 BHF-UCL occurs_in(CL:0002618),part_of(GO:0007596)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000149452_9606 URS0000149452_9606 involved_in GO:0032410 PMID:25785043 IDA P Homo sapiens (human) hsa-miR-93-5p miRNA taxon:9606 20210402 BHF-UCL has_input(UniProtKB:O95477)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000149452_9606 URS0000149452_9606 involved_in GO:1901386 PMID:25389315 ISS RNAcentral:URS0000149452_10090 P Homo sapiens (human) hsa-miR-93-5p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:Q92736),occurs_in(CL:0000746),part_of(GO:0010880),occurs_in(UBERON:0002081)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000155642_9606 URS0000155642_9606 involved_in GO:1905151 PMID:26209011 IGI UniProtKB:Q14524 P Homo sapiens (human) hsa-miR-192-5p miRNA taxon:9606 20210326 BHF-UCL occurs_in(UBERON:0002081)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000183BED_9606 URS0000183BED_9606 acts_upstream_of_or_within GO:2000272 PMID:29901200 IDA P Homo sapiens (human) hsa-miR-23b-3p miRNA taxon:9606 20201016 ARUK-UCL has_input(UniProtKB:Q14626)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000192F9C_9606 URS0000192F9C_9606 involved_in GO:1901386 PMID:29373717 IMP P Homo sapiens (human) hsa-miR-200c-3p miRNA taxon:9606 20210326 BHF-UCL occurs_in(CL:0000746),causally_upstream_of(GO:0055117)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000019907A_9606 URS000019907A_9606 acts_upstream_of GO:0110114 PMID:27365390 IDA P Homo sapiens (human) hsa-miR-30c-5p miRNA taxon:9606 20191204 BHF-UCL occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000019B0F7_9606 URS000019B0F7_9606 involved_in GO:0043433 PMID:24047927 IDA P Homo sapiens (human) hsa-miR-26a-5p miRNA taxon:9606 20180125 BHF-UCL has_input(UniProtKB:Q15797),occurs_in(CL:0002618),negatively_regulates(GO:0030509)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000019B0F7_9606 URS000019B0F7_9606 involved_in GO:0051001 PMID:28602162 IDA P Homo sapiens (human) hsa-miR-26a-5p miRNA taxon:9606 20180117 BHF-UCL occurs_in(CL:0002618),has_input(UniProtKB:P29474),part_of(GO:0038084)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000019B0F7_9606 URS000019B0F7_9606 involved_in GO:1903609 GO_REF:0000024 ISS RNAcentral:URS000019B0F7_10090 P Homo sapiens (human) hsa-miR-26a-5p miRNA taxon:9606 20160301 BHF-UCL occurs_in(CL:0002129),part_of(GO:0060371)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000019B0F7_9606 URS000019B0F7_9606 involved_in GO:1903609 GO_REF:0000024 ISS RNAcentral:URS000019B0F7_10116 P Homo sapiens (human) hsa-miR-26a-5p miRNA taxon:9606 20160301 BHF-UCL occurs_in(CL:0002131)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001B341F_9606 URS00001B341F_9606 acts_upstream_of GO:0032088 PMID:25327529 IGI UniProtKB:P01584 P Homo sapiens (human) hsa-miR-27a-5p miRNA taxon:9606 20191118 BHF-UCL has_input(UniProtKB:Q04206),occurs_in(CL:0002544)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001C94E0_9606 URS00001C94E0_9606 involved_in GO:0006919 PMID:23353574 IDA P Homo sapiens (human) hsa-miR-15a-3p miRNA taxon:9606 20151207 BHF-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001D6BAE_9606 URS00001D6BAE_9606 involved_in GO:1903609 PMID:22880819 IDA P Homo sapiens (human) hsa-miR-212-3p miRNA taxon:9606 20160304 BHF-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001DC04F_9606 URS00001DC04F_9606 acts_upstream_of GO:0032410 PMID:28042875 IDA P Homo sapiens (human) hsa-miR-1-3p miRNA taxon:9606 20210319 ARUK-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001DC04F_9606 URS00001DC04F_9606 involved_in GO:0043433 GO_REF:0000024 ISS RNAcentral:URS00001DC04F_10116 P Homo sapiens (human) hsa-miR-1-3p miRNA taxon:9606 20170630 BHF-UCL occurs_in(CL:0002131),has_input(PR:000003112)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001DC04F_9606 URS00001DC04F_9606 involved_in GO:1902260 PMID:23157812 IMP P Homo sapiens (human) hsa-miR-1-3p miRNA taxon:9606 20160307 BHF-UCL occurs_in(CL:0002664),part_of(GO:0071333)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00001DC04F_9606 URS00001DC04F_9606 involved_in GO:1903762 GO_REF:0000024 ISS RNAcentral:URS00001DC04F_10090 P Homo sapiens (human) hsa-miR-1-3p miRNA taxon:9606 20160303 BHF-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002075FA_9606 URS00002075FA_9606 involved_in GO:0032410 PMID:25785043 IDA P Homo sapiens (human) hsa-miR-17-5p miRNA taxon:9606 20210402 BHF-UCL has_input(UniProtKB:O95477)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002075FA_9606 URS00002075FA_9606 involved_in GO:0043154 GO_REF:0000024 ISS RNAcentral:URS00002075FA_10116 P Homo sapiens (human) hsa-miR-17-5p miRNA taxon:9606 20170807 BHF-UCL part_of(GO:0071874),occurs_in(CL:0000746)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002075FA_9606 URS00002075FA_9606 involved_in GO:1904685 GO_REF:0000024 ISS RNAcentral:URS00002075FA_10116 P Homo sapiens (human) hsa-miR-17-5p miRNA taxon:9606 20160418 BHF-UCL occurs_in(UBERON:0002048),has_input(UniProtKB:P50282),part_of(GO:0033554)|occurs_in(UBERON:0002048),part_of(GO:0033554),has_input(UniProtKB:P33436)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000020D84A_9606 URS000020D84A_9606 involved_in GO:0043407 PMID:21385766 IDA P Homo sapiens (human) hsa-miR-218-5p miRNA taxon:9606 20171116 BHF-UCL occurs_in(CL:0000071)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000021202F_9606 URS000021202F_9606 acts_upstream_of GO:0032410 PMID:23893241 IGI UniProtKB:P08183 P Homo sapiens (human) hsa-miR-508-5p miRNA taxon:9606 20210210 ARUK-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000025576D_9606 URS000025576D_9606 involved_in GO:1905598 PMID:31320936 IDA P Homo sapiens (human) hsa-miR-92b-3p miRNA taxon:9606 20230103 BHF-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000026261D_9606 URS000026261D_9606 acts_upstream_of GO:0032088 PMID:30233718 IMP P Homo sapiens (human) hsa-miR-140-5p miRNA taxon:9606 20201102 ARUK-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000272039_9606 URS0000272039_9606 acts_upstream_of GO:0051005 PMID:25149060 IDA P Homo sapiens (human) hsa-miR-590-3p miRNA taxon:9606 20191025 BHF-UCL occurs_in(CL:0000235)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000272A3D_9606 URS0000272A3D_9606 involved_in GO:1904684 PMID:23936390 IDA P Homo sapiens (human) hsa-miR-29c-3p miRNA taxon:9606 20160707 BHF-UCL has_input(UniProtKB:P08253)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000028C188_9606 URS000028C188_9606 acts_upstream_of GO:0051092 PMID:28159925 IGI UniProtKB:Q04206 P Homo sapiens (human) hsa-miR-1246 miRNA taxon:9606 20210716 ARUK-UCL occurs_in(CL:0000134),part_of(GO:1903265)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002C0FCB_9606 URS00002C0FCB_9606 involved_in GO:0032769 PMID:25802328 IDA P Homo sapiens (human) hsa-miR-130b-3p miRNA taxon:9606 20180628 BHF-UCL has_input(UniProtKB:P05177),occurs_in(CL:0000182)|has_input(UniProtKB:P20813),occurs_in(CL:0000182)|has_input(UniProtKB:P10632),occurs_in(CL:0000182)|has_input(UniProtKB:P11712),occurs_in(CL:0000182)|has_input(UniProtKB:P33261),occurs_in(CL:0000182)|has_input(UniProtKB:P08684),occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002DABEA_9606 URS00002DABEA_9606 involved_in GO:1902949 PMID:28947385 IDA P Homo sapiens (human) hsa-miR-125b-1-3p miRNA taxon:9606 20181217 ARUK-UCL occurs_in(CL:0000540),has_input(UniProtKB:Q00535)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00002E857A_9606 URS00002E857A_9606 acts_upstream_of GO:0032410 PMID:18645025 IMP P Homo sapiens (human) hsa-miR-451a miRNA taxon:9606 20210215 ARUK-UCL part_of(GO:1905700),has_input(UniProtKB:P08183)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000030BD69_9606 URS000030BD69_9606 acts_upstream_of GO:0071901 PMID:26330104 IMP P Homo sapiens (human) hsa-miR-34a-5p miRNA taxon:9606 20200821 ARUK-UCL has_input(UniProtKB:Q13131),part_of(GO:1902532),occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000030BD69_9606 URS000030BD69_9606 involved_in GO:0110114 GO_REF:0000024 ISS RNAcentral:URS000030BD69_10090 P Homo sapiens (human) hsa-miR-34a-5p miRNA taxon:9606 20180726 BHF-UCL occurs_in(UBERON:0002107)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000316FA5_9606 URS0000316FA5_9606 involved_in GO:0071902 PMID:24027266 ISS RNAcentral:URS0000316FA5_10116 P Homo sapiens (human) hsa-miR-26b-5p miRNA taxon:9606 20190307 ARUK-UCL occurs_in(CL:0010012),has_input(UniProtKB:Q00535),has_input(UniProtKB:P10636)|occurs_in(CL:0010012),has_input(UniProtKB:Q00535),has_input(UniProtKB:P06400)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000316FA5_9606 URS0000316FA5_9606 involved_in GO:1902949 PMID:24027266 ISS RNAcentral:URS0000316FA5_10116 P Homo sapiens (human) hsa-miR-26b-5p miRNA taxon:9606 20190307 ARUK-UCL occurs_in(CL:0010012),has_input(UniProtKB:Q00535),has_input(UniProtKB:P10636)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000324096_9606 URS0000324096_9606 involved_in GO:0043154 PMID:26296645 IDA P Homo sapiens (human) hsa-let-7b-5p miRNA taxon:9606 20160217 BHF-UCL has_input(UniProtKB:P42574),occurs_in(CL:0002540)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000032BD73_9606 URS000032BD73_9606 involved_in GO:0032410 PMID:28881788 IDA P Homo sapiens (human) hsa-miR-133b miRNA taxon:9606 20211104 ARUK-UCL has_input(UniProtKB:P33527),causally_upstream_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000032BD73_9606 URS000032BD73_9606 involved_in GO:0043433 PMID:24443799 IDA P Homo sapiens (human) hsa-miR-133b miRNA taxon:9606 20200225 DIBU has_input(ENSEMBL:ENSG00000111087)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000330617_9606 URS0000330617_9606 acts_upstream_of_or_within GO:0043280 PMID:31124343 IGI UniProtKB:P01375 P Homo sapiens (human) hsa-miR-27b-5p miRNA taxon:9606 20200210 ARUK-UCL occurs_in(CL:0000214),part_of(GO:2001244)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000338542_9606 URS0000338542_9606 involved_in GO:0032088 PMID:21030878 IMP P Homo sapiens (human) hsa-miR-155-5p miRNA taxon:9606 20180706 BHF-UCL occurs_in(CL:0000517),part_of(GO:0071404)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000338542_9606 URS0000338542_9606 involved_in GO:0043433 PMID:26934326 IDA P Homo sapiens (human) hsa-miR-155-5p miRNA taxon:9606 20210326 BHF-UCL has_input(UniProtKB:Q04206)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000347D0F_9606 URS0000347D0F_9606 involved_in GO:1905151 PMID:33108349 IDA P Homo sapiens (human) hsa-miR-448 miRNA taxon:9606 20210326 BHF-UCL has_input(UniProtKB:Q14524),occurs_in(CL:2000046),part_of(GO:1903783)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003496BE_9606 URS00003496BE_9606 acts_upstream_of GO:0032410 PMID:28260112 IGI UniProtKB:P08183 P Homo sapiens (human) hsa-miR-9-3p miRNA taxon:9606 20210319 ARUK-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000034979B_9606 URS000034979B_9606 involved_in GO:1901386 PMID:27545043 IDA P Homo sapiens (human) hsa-miR-208b-3p miRNA taxon:9606 20210326 BHF-UCL occurs_in(CL:0002129),part_of(GO:1905949)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003768C5_9606 URS00003768C5_9606 involved_in GO:0043507 PMID:24332650 IDA P Homo sapiens (human) hsa-miR-92a-3p miRNA taxon:9606 20160225 BHF-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003768C5_9606 URS00003768C5_9606 involved_in GO:1904685 PMID:23820254 IMP P Homo sapiens (human) hsa-miR-92a-3p miRNA taxon:9606 20160225 BHF-UCL has_input(UniProtKB:P08253)|has_input(UniProtKB:P14780)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000037C5A8_9606 URS000037C5A8_9606 acts_upstream_of GO:0043433 PMID:27785072 IDA P Homo sapiens (human) hsa-miR-144-3p miRNA taxon:9606 20200302 DIBU has_input(UniProtKB:O60315),part_of(GO:0010719)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000037C5A8_9606 URS000037C5A8_9606 acts_upstream_of GO:0043433 PMID:27785072 IDA P Homo sapiens (human) hsa-miR-144-3p miRNA taxon:9606 20200302 DIBU has_input(UniProtKB:P37275),part_of(GO:0010719)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003AFD9B_9606 URS00003AFD9B_9606 involved_in GO:1904684 PMID:24813629 IDA P Homo sapiens (human) hsa-miR-152-3p miRNA taxon:9606 20180131 BHF-UCL occurs_in(CL:0002618)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003B95DA_9606 URS00003B95DA_9606 involved_in GO:1900131 PMID:24608080 IDA P Homo sapiens (human) hsa-miR-27a-3p miRNA taxon:9606 20190116 ARUK-UCL occurs_in(CL:0000517)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003B95DA_9606 URS00003B95DA_9606 involved_in GO:1905598 PMID:26318398 IDA P Homo sapiens (human) hsa-miR-27a-3p miRNA taxon:9606 20180814 BHF-UCL occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003B95DA_9606 URS00003B95DA_9606 involved_in GO:1905919 PMID:24608080 IDA P Homo sapiens (human) hsa-miR-27a-3p miRNA taxon:9606 20220217 ARUK-UCL occurs_in(CL:0000517),has_input(UniProtKB:P35610)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003BBF48_9606 URS00003BBF48_9606 involved_in GO:1905596 PMID:26437365 IDA P Homo sapiens (human) hsa-miR-148a-3p miRNA taxon:9606 20180305 BHF-UCL occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003D1AE3_9606 URS00003D1AE3_9606 involved_in GO:0032088 PMID:30365148 IDA P Homo sapiens (human) hsa-miR-15a-5p miRNA taxon:9606 20181108 ARUK-UCL occurs_in(CL:0002585),part_of(GO:0071333)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003D1AE3_9606 URS00003D1AE3_9606 involved_in GO:0045736 PMID:27343180 IDA P Homo sapiens (human) hsa-miR-15a-5p miRNA taxon:9606 20181219 ARUK-UCL has_input(UniProtKB:Q00535),occurs_in(CL:0000540)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00003F2D94_9606 URS00003F2D94_9606 involved_in GO:1905049 PMID:28358369 IDA P Homo sapiens (human) hsa-miR-199b-3p miRNA taxon:9606 20200208 BHF-UCL has_input(UniProtKB:P08253),occurs_in(CL:0000632)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000040780F_9606 URS000040780F_9606 involved_in GO:0051001 PMID:24244340 IMP P Homo sapiens (human) hsa-miR-138-5p miRNA taxon:9606 20180125 BHF-UCL occurs_in(CL:2000008),has_input(UniProtKB:P29474)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000040780F_9606 URS000040780F_9606 involved_in GO:0051005 PMID:31769250 IDA P Homo sapiens (human) hsa-miR-138-5p miRNA taxon:9606 20221217 BHF-UCL part_of(GO:0045599),occurs_in(CL:0002570)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000040780F_9606 URS000040780F_9606 involved_in GO:1903996 PMID:21444814 IMP P Homo sapiens (human) hsa-miR-138-5p miRNA taxon:9606 20220525 BHF-UCL has_input(UniProtKB:Q05397),part_of(GO:0070373),part_of(GO:0045668),occurs_in(CL:0002540)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000040DCFF_9606 URS000040DCFF_9606 acts_upstream_of GO:0032410 PMID:26626440 IMP P Homo sapiens (human) hsa-miR-186-5p miRNA taxon:9606 20210210 ARUK-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004208C5_9606 URS00004208C5_9606 involved_in GO:0043433 PMID:26354749 IDA P Homo sapiens (human) hsa-miR-9-5p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:P19838),causally_upstream_of(GO:1901223)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000424278_9606 URS0000424278_9606 involved_in GO:1903996 PMID:29384235 IC GO:0010629 P Homo sapiens (human) Hsa-Mir-147-v1_3p (mature (guide)) miRNA taxon:9606 20190220 ARUK-UCL occurs_in(CL:0000047),has_input(UniProtKB:O60674),part_of(GO:2000736)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000432971_9606 URS0000432971_9606 acts_upstream_of GO:0032410 PMID:26924291 IMP P Homo sapiens (human) hsa-miR-34b-5p miRNA taxon:9606 20210215 ARUK-UCL part_of(GO:1905700),has_input(UniProtKB:P08183)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000446722_9606 URS0000446722_9606 involved_in GO:1904685 GO_REF:0000024 ISS RNAcentral:URS0000446722_10090 P Homo sapiens (human) hsa-miR-205-5p miRNA taxon:9606 20160210 BHF-UCL occurs_in(UBERON:0001516)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000044FE6A_9606 URS000044FE6A_9606 involved_in GO:0043433 PMID:26801246 IDA P Homo sapiens (human) hsa-miR-508-3p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:P19838),causally_upstream_of(GO:1901223)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000476BE1_9606 URS0000476BE1_9606 involved_in GO:0045736 PMID:27343180 IDA P Homo sapiens (human) hsa-miR-103a-3p miRNA taxon:9606 20181219 ARUK-UCL has_input(UniProtKB:Q00535),occurs_in(CL:0000540)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000476BE1_9606 URS0000476BE1_9606 involved_in GO:1903817 PMID:27558843 IDA P Homo sapiens (human) hsa-miR-103a-3p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:Q12809),part_of(GO:1903287)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000483184_9606 URS0000483184_9606 involved_in GO:0032410 PMID:20466882 IDA P Homo sapiens (human) hsa-miR-33a-5p miRNA taxon:9606 20210524 BHF-UCL has_input(UniProtKB:O95477),occurs_in(UBERON:0002107),causally_upstream_of(GO:0090370)|has_input(UniProtKB:O95477),occurs_in(CL:0000235),causally_upstream_of(GO:0090370)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004996E9_9606 URS00004996E9_9606 acts_upstream_of GO:0032410 PMID:26850595 IGI UniProtKB:P08183 P Homo sapiens (human) hsa-miR-873-5p miRNA taxon:9606 20210319 ARUK-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000049A7EB_9606 URS000049A7EB_9606 acts_upstream_of GO:0031327 PMID:29048659 IDA P Homo sapiens (human) hsa-miR-520c-3p miRNA taxon:9606 20200130 ARUK-UCL has_input(UniProtKB:P08670)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004AE8D3_9606 URS00004AE8D3_9606 acts_upstream_of_or_within GO:0031327 PMID:30210926 IDA P Homo sapiens (human) hsa-miR-506-3p miRNA taxon:9606 20200312 ARUK-UCL has_input(UniProtKB:P46013)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004AE8D3_9606 URS00004AE8D3_9606 involved_in GO:0031327 PMID:30210926 IDA P Homo sapiens (human) hsa-miR-506-3p miRNA taxon:9606 20200312 ARUK-UCL has_input(UniProtKB:P08670)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004BAA8A_9606 URS00004BAA8A_9606 involved_in GO:0032769 PMID:19945440 IDA P Homo sapiens (human) hsa-miR-378a-5p miRNA taxon:9606 20180629 BHF-UCL has_input(UniProtKB:P05181)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004BCD9C_9606 URS00004BCD9C_9606 involved_in GO:0032088 PMID:30365148 IDA P Homo sapiens (human) hsa-miR-16-5p miRNA taxon:9606 20181108 ARUK-UCL occurs_in(CL:0002585),part_of(GO:0071333)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004C8DD5_9606 URS00004C8DD5_9606 involved_in GO:0032410 PMID:20466882 IDA P Homo sapiens (human) hsa-miR-33b-5p miRNA taxon:9606 20210524 BHF-UCL has_input(UniProtKB:O95477),occurs_in(UBERON:0002107)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004C9052_9606 URS00004C9052_9606 involved_in GO:0031586 GO_REF:0000024 ISS RNAcentral:URS00004C9052_10116 P Homo sapiens (human) hsa-miR-133a-3p miRNA taxon:9606 20170203 BHF-UCL occurs_in(CL:0002131)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004C9052_9606 URS00004C9052_9606 involved_in GO:0032410 PMID:25714665 IDA P Homo sapiens (human) hsa-miR-133a-3p miRNA taxon:9606 20211104 ARUK-UCL has_input(UniProtKB:P33527),causally_upstream_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004C9052_9606 URS00004C9052_9606 involved_in GO:1902260 PMID:23157812 IMP P Homo sapiens (human) hsa-miR-133a-3p miRNA taxon:9606 20160307 BHF-UCL occurs_in(CL:0002664),part_of(GO:0071333)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004CCA62_9606 URS00004CCA62_9606 acts_upstream_of GO:0043433 PMID:30592286 IDA P Homo sapiens (human) hsa-miR-498-5p miRNA taxon:9606 20210107 DIBU has_input(UniProtKB:O60315),causally_upstream_of(GO:0030512)|has_input(UniProtKB:O60315),causally_upstream_of(GO:0090090)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004DC6C5_9606 URS00004DC6C5_9606 involved_in GO:0045736 PMID:26735582 IDA P Homo sapiens (human) hsa-miR-711 miRNA taxon:9606 20181016 BHF-UCL has_input(UniProtKB:P11802),happens_during(GO:0000082)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004E1410_9606 URS00004E1410_9606 involved_in GO:0032410 PMID:25344911 IDA P Homo sapiens (human) hsa-miR-129-5p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:O15440),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004E1410_9606 URS00004E1410_9606 involved_in GO:0032410 PMID:25344911 IDA P Homo sapiens (human) hsa-miR-129-5p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:P08183),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS00004E1410_9606 URS00004E1410_9606 involved_in GO:0032410 PMID:25344911 IDA P Homo sapiens (human) hsa-miR-129-5p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:P45844),part_of(GO:1905700)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000055128B_9606 URS000055128B_9606 involved_in GO:1904233 PMID:20436681 IDA P Homo sapiens (human) hsa-miR-210-3p miRNA taxon:9606 20190314 ARUK-UCL
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000554A4F_9606 URS0000554A4F_9606 involved_in GO:0043433 PMID:24299514 IDA P Homo sapiens (human) hsa-miR-199a-5p miRNA taxon:9606 20210326 BHF-UCL occurs_in(CL:0000576),causally_upstream_of(GO:1900102),has_input(UniProtKB:P18850)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000565C8D_9606 URS0000565C8D_9606 involved_in GO:1902948 PMID:30556160 IDA P Homo sapiens (human) hsa-miR-219a-5p miRNA taxon:9606 20210720 ARUK-UCL has_input(UniProtKB:Q5TCY1),occurs_in(UBERON:0000955),causally_upstream_of(GO:0033137)|has_input(UniProtKB:P49841),occurs_in(UBERON:0000955),causally_upstream_of(GO:0033137)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000574A2C_9606 URS0000574A2C_9606 involved_in GO:0006469 PMID:25447536 IDA P Homo sapiens (human) hsa-miR-20a-5p miRNA taxon:9606 20180112 BHF-UCL has_input(UniProtKB:Q13976),occurs_in(CL:0002591)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS0000574A2C_9606 URS0000574A2C_9606 involved_in GO:0071901 PMID:22696064 IDA P Homo sapiens (human) hsa-miR-20a-5p miRNA taxon:9606 20180111 BHF-UCL part_of(GO:0035924)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059273E_9606 URS000059273E_9606 involved_in GO:0071901 PMID:21788589 IDA P Homo sapiens (human) hsa-miR-24-3p miRNA taxon:9606 20171116 BHF-UCL has_input(UniProtKB:O96013)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059273E_9606 URS000059273E_9606 involved_in GO:1904684 GO_REF:0000024 ISS RNAcentral:URS000059273E_10090 P Homo sapiens (human) hsa-miR-24-3p miRNA taxon:9606 20161110 BHF-UCL occurs_in(CL:0000235)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059273E_9606 URS000059273E_9606 involved_in GO:1905151 PMID:29457789 IDA P Homo sapiens (human) hsa-miR-24-3p miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:Q14524),part_of(GO:1903783)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059311D_9606 URS000059311D_9606 acts_upstream_of GO:0051001 PMID:25795136 ISS RNAcentral:URS000059311D_10116 P Homo sapiens (human) hsa-miR-27b-3p miRNA taxon:9606 20200813 ARUK-UCL has_input(UniProtKB:P29474),occurs_in(UBERON:0002048)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059311D_9606 URS000059311D_9606 involved_in GO:0032769 PMID:16982751 IMP P Homo sapiens (human) hsa-miR-27b-3p miRNA taxon:9606 20180628 BHF-UCL has_input(UniProtKB:Q16678)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059311D_9606 URS000059311D_9606 involved_in GO:1900131 PMID:24608080 IDA P Homo sapiens (human) hsa-miR-27b-3p miRNA taxon:9606 20190116 ARUK-UCL occurs_in(CL:0000517)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059311D_9606 URS000059311D_9606 involved_in GO:1905596 PMID:26520906 IDA P Homo sapiens (human) hsa-miR-27b-3p miRNA taxon:9606 20180221 BHF-UCL occurs_in(CL:0000182)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000059311D_9606 URS000059311D_9606 involved_in GO:1905919 PMID:24608080 IDA P Homo sapiens (human) hsa-miR-27b-3p miRNA taxon:9606 20220217 ARUK-UCL occurs_in(CL:0000517),has_input(UniProtKB:P35610)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000075A42A_9606 URS000075A42A_9606 involved_in GO:0043433 PMID:27573859 IDA P Homo sapiens (human) hsa-miR-892b miRNA taxon:9606 20181115 ARUK-UCL has_input(UniProtKB:P08047)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000075A42A_9606 URS000075A42A_9606 involved_in GO:1904684 PMID:27573859 IDA P Homo sapiens (human) hsa-miR-892b miRNA taxon:9606 20181115 ARUK-UCL has_input(UniProtKB:P14780)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000075B7E4_9606 URS000075B7E4_9606 involved_in GO:0032410 PMID:24751522 IDA P Homo sapiens (human) hsa-miR-613 miRNA taxon:9606 20210328 BHF-UCL has_input(UniProtKB:O95477),occurs_in(CL:0000235),part_of(GO:0090370)
• WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- RNAcentral URS000075B7E4_9606 URS000075B7E4_9606 involved_in GO:0043433 PMID:24751522 IDA P Homo sapiens (human) hsa-miR-613 miRNA taxon:9606 20210326 BHF-UCL has_input(UniProtKB:Q13133),occurs_in(CL:0000235),causally_upstream_of(GO:0090370)

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

• total: 4

Messages

• ERROR - Violates GO Rule: GORULE:0000011: ND annotations to root nodes only -- RNAcentral URS00004C3DB1_9606 URS00004C3DB1_9606 enables GO:0003674 GO_REF:0000115 IEA Rfam:RF00670 F Homo sapiens (human) microRNA hsa-mir-105 precursor (hsa-mir-105-1) pre_miRNA taxon:9606 20240312 RNAcentral
• ERROR - Violates GO Rule: GORULE:0000011: ND annotations to root nodes only -- RNAcentral URS0000638811_9606 URS0000638811_9606 enables GO:0003674 GO_REF:0000115 IEA Rfam:RF00670 F Homo sapiens (human) microRNA hsa-mir-105 precursor (hsa-mir-105-2) pre_miRNA taxon:9606 20240312 RNAcentral
• ERROR - Violates GO Rule: GORULE:0000011: ND annotations to root nodes only -- RNAcentral URS0000D5367C_9606 URS0000D5367C_9606 enables GO:0003674 GO_REF:0000115 IEA Rfam:RF00670 F Homo sapiens (human) Hsa-Mir-105-P1_pre stem-loop pre_miRNA taxon:9606 20240312 RNAcentral
• ERROR - Violates GO Rule: GORULE:0000011: ND annotations to root nodes only -- RNAcentral URS000230F02B_9606 URS000230F02B_9606 enables GO:0003674 GO_REF:0000115 IEA Rfam:RF00670 F Homo sapiens (human) Hsa-Mir-105-P2_pre stem-loop pre_miRNA taxon:9606 20240312 RNAcentral

gorule-0000013

Taxon-appropriate annotation check

• total: 0

gorule-0000015

Dual species taxon check

• total: 0

gorule-0000016

With/From: IC annotations require a With/From GO ID

• total: 0

gorule-0000017

IDA annotations must not have a With/From entry

• total: 0

gorule-0000018

IPI annotations require a With/From entry

• total: 0

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 7

Messages

• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0036474) -- RNAcentral URS00003768C5_9606 URS00003768C5_9606 involved_in GO:0034392 GO_REF:0000024 ISS RNAcentral:URS0000329B12_10090 P Homo sapiens (human) hsa-miR-92a-3p miRNA taxon:9606 20230405 BHF-UCL part_of(GO:0036474),occurs_in(CL:0000359)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0036474) -- RNAcentral URS00003768C5_9606 URS00003768C5_9606 involved_in GO:0043508 GO_REF:0000024 ISS RNAcentral:URS0000329B12_10090 P Homo sapiens (human) hsa-miR-92a-3p miRNA taxon:9606 20230405 BHF-UCL has_input(UniProtKB:P05627),part_of(GO:0036474),occurs_in(CL:0000359)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0036474) -- RNAcentral URS00003768C5_9606 URS00003768C5_9606 involved_in GO:0046329 GO_REF:0000024 ISS RNAcentral:URS0000329B12_10090 P Homo sapiens (human) hsa-miR-92a-3p miRNA taxon:9606 20230405 BHF-UCL part_of(GO:0036474),occurs_in(CL:0000359)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0060820) -- RNAcentral URS000075D95B_9606 URS000075D95B_9606 enables GO:0140463 PMID:32482714 TAS F Homo sapiens (human) X inactive specific transcript (XIST) lncRNA taxon:9606 20230815 ARUK-UCL part_of(GO:0060820)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0060820) -- RNAcentral URS0000DB8B87_9606 URS0000DB8B87_9606 enables GO:0140463 PMID:31048766 TAS F Homo sapiens (human) X inactive specific transcript lncRNA taxon:9606 20230530 ARUK-UCL part_of(GO:0060820)|part_of(GO:0051303)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0070265) -- RNAcentral URS0000338542_9606 URS0000338542_9606 involved_in GO:0035195 PMID:20550618 IDA P Homo sapiens (human) hsa-miR-155-5p miRNA taxon:9606 20160527 BHF-UCL occurs_in(CL:0010021),occurs_in(UBERON:0000323),has_input(UniProtKB:Q13546),regulates(GO:0070265)
• ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:2000250) -- RNAcentral URS0000237AF9_9606 URS0000237AF9_9606 involved_in GO:0035195 PMID:24223803 IDA P Homo sapiens (human) hsa-miR-335-5p miRNA taxon:9606 20220825 BHF-UCL has_input(UniProtKB:Q9NZ56),part_of(GO:2000250)|has_input(UniProtKB:Q8IVF7),part_of(GO:2000250)|has_input(UniProtKB:Q86T65),part_of(GO:2000250)

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

• total: 0

gorule-0000029

IEAs should be less than one year old.

• total: 0

gorule-0000030

Obsolete GO_REFs are not allowed

• total: 0

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

• total: 0

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

• total: 0

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

• total: 0

gorule-0000043

Check for valid combination of evidence code and GO_REF

• total: 0

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 0

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

• total: 0

gorule-0000055

References should have only one ID per ID space

• total: 0

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

• total: 0

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 0

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

• total: 0

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

• total: 0

other

• total: 0

GO:0030336 negative regulation of cell migration FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q05397 part_of GO:0030336 negative regulation of cell migration IDA
GO:0032700 negative regulation of interleukin-17 production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q16552 part_of GO:0032700 negative regulation of interleukin-17 production IDA
GO:0035924 cellular response to vascular endothelial growth factor stimulus FoldBasedPredictor GO:0090051 negative regulation of cell migration involved in sprouting angiogenesis occurs_in CL:0002618 endothelial cell of umbilical vein part_of GO:0035924 cellular response to vascular endothelial growth factor stimulus IDA
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q07817 positively_regulates GO:0097153 cysteine-type endopeptidase activity involved in apoptotic process IDA
GO:0030513 positive regulation of BMP signaling pathway FoldBasedPredictor GO:2000627 positive regulation of miRNA catabolic process has_input RNAcentral:URS000075D16F_9606 part_of GO:0030513 positive regulation of BMP signaling pathway IMP
GO:0030336 negative regulation of cell migration FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q9ULV1 part_of GO:0030336 negative regulation of cell migration IDA
GO:1903817 negative regulation of voltage-gated potassium channel activity FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q12809 part_of GO:1903817 negative regulation of voltage-gated potassium channel activity IDA
GO:0002865 negative regulation of acute inflammatory response to antigenic stimulus FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q04206 part_of GO:0002865 negative regulation of acute inflammatory response to antigenic stimulus IDA
GO:0060816 random inactivation of X chromosome FoldBasedPredictor GO:0140719 constitutive heterochromatin formation part_of GO:0060816 random inactivation of X chromosome TAS
GO:0061042 vascular wound healing FoldBasedPredictor GO:1905205 positive regulation of connective tissue replacement part_of GO:0033554 cellular response to stress occurs_in UBERON:0000948 heart part_of GO:0061042 vascular wound healing ISS
GO:0033554 cellular response to stress FoldBasedPredictor GO:1905205 positive regulation of connective tissue replacement part_of GO:0033554 cellular response to stress occurs_in UBERON:0000948 heart part_of GO:0061042 vascular wound healing ISS
GO:0032717 negative regulation of interleukin-8 production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:P10145 part_of GO:0032717 negative regulation of interleukin-8 production causally_upstream_of GO:0032717 negative regulation of interleukin-8 production IDA
GO:0030856 regulation of epithelial cell differentiation FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:O15353 regulates GO:0030855 epithelial cell differentiation IDA
GO:0032691 negative regulation of interleukin-1 beta production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing occurs_in CL:0000214 synovial cell has_input UniProtKB:P01584 part_of GO:0032691 negative regulation of interleukin-1 beta production IDA
GO:1900408 negative regulation of cellular response to oxidative stress FoldBasedPredictor GO:2001243 negative regulation of intrinsic apoptotic signaling pathway part_of GO:1900408 negative regulation of cellular response to oxidative stress ISS
GO:0001818 negative regulation of cytokine production FoldBasedPredictor GO:0035279 miRNA-mediated gene silencing by mRNA destabilization has_input UniProtKB:P12643 causally_upstream_of GO:0030514 negative regulation of BMP signaling pathway part_of GO:0001818 negative regulation of cytokine production IDA
GO:1903783 negative regulation of sodium ion import across plasma membrane FoldBasedPredictor GO:1905151 negative regulation of voltage-gated sodium channel activity has_input UniProtKB:Q14524 occurs_in CL:2000046 ventricular cardiac muscle cell part_of GO:1903783 negative regulation of sodium ion import across plasma membrane IDA
GO:1904881 cellular response to hydrogen sulfide FoldBasedPredictor GO:0043537 negative regulation of blood vessel endothelial cell migration part_of GO:1904881 cellular response to hydrogen sulfide IDA
GO:0030336 negative regulation of cell migration FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:P29317 part_of GO:0030336 negative regulation of cell migration IDA
GO:0071404 cellular response to low-density lipoprotein particle stimulus FoldBasedPredictor GO:2000627 positive regulation of miRNA catabolic process has_input RNAcentral:URS00000DF6D0_9606 part_of GO:0071404 cellular response to low-density lipoprotein particle stimulus IDA
GO:0010719 negative regulation of epithelial to mesenchymal transition FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:P37173 part_of GO:0010719 negative regulation of epithelial to mesenchymal transition IDA
GO:0044344 cellular response to fibroblast growth factor stimulus FoldBasedPredictor GO:1904706 negative regulation of vascular associated smooth muscle cell proliferation results_in_division_of CL:0002591 smooth muscle cell of the pulmonary artery part_of GO:0044344 cellular response to fibroblast growth factor stimulus ISS
GO:0032717 negative regulation of interleukin-8 production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing part_of GO:0032717 negative regulation of interleukin-8 production causally_upstream_of GO:0032717 negative regulation of interleukin-8 production has_input ENSEMBL:ENSG00000169429 IDA
GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway FoldBasedPredictor GO:0035279 miRNA-mediated gene silencing by mRNA destabilization has_input UniProtKB:P01137 part_of GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway causally_upstream_of GO:1901202 negative regulation of extracellular matrix assembly occurs_in UBERON:0002048 lung IDA
GO:0032699 negative regulation of interleukin-16 production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q14005 part_of GO:0032699 negative regulation of interleukin-16 production occurs_in CL:0000235 macrophage IDA
GO:0032711 negative regulation of interleukin-27 production FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:Q8NEV9 part_of GO:0032711 negative regulation of interleukin-27 production IDA
GO:0071560 cellular response to transforming growth factor beta stimulus FoldBasedPredictor GO:0140050 negative regulation of endocardial cushion to mesenchymal transition part_of GO:0071560 cellular response to transforming growth factor beta stimulus ISS
GO:0035924 cellular response to vascular endothelial growth factor stimulus FoldBasedPredictor GO:1904753 negative regulation of vascular associated smooth muscle cell migration part_of GO:0035924 cellular response to vascular endothelial growth factor stimulus IDA
GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway FoldBasedPredictor GO:0035279 miRNA-mediated gene silencing by mRNA destabilization has_input UniProtKB:P01137 part_of GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway occurs_in CL:0000125 glial cell IDA
GO:0030336 negative regulation of cell migration FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:P28799 negatively_regulates GO:0016477 cell migration IDA
GO:0045944 positive regulation of transcription by RNA polymerase II FoldBasedPredictor GO:0140588 chromatin looping part_of GO:0045944 positive regulation of transcription by RNA polymerase II has_input UniProtKB:Q6IMN6 IMP
GO:0072497 mesenchymal stem cell differentiation FoldBasedPredictor GO:0090263 positive regulation of canonical Wnt signaling pathway occurs_in CL:0002540 mesenchymal stem cell of the bone marrow part_of GO:0072497 mesenchymal stem cell differentiation part_of GO:0001649 osteoblast differentiation IMP
GO:0001649 osteoblast differentiation FoldBasedPredictor GO:0090263 positive regulation of canonical Wnt signaling pathway occurs_in CL:0002540 mesenchymal stem cell of the bone marrow part_of GO:0072497 mesenchymal stem cell differentiation part_of GO:0001649 osteoblast differentiation IMP
GO:0071456 cellular response to hypoxia FoldBasedPredictor GO:1905205 positive regulation of connective tissue replacement occurs_in UBERON:0000948 heart part_of GO:0071456 cellular response to hypoxia ISS
GO:0061042 vascular wound healing FoldBasedPredictor GO:1905205 positive regulation of connective tissue replacement part_of GO:0033554 cellular response to stress occurs_in UBERON:0000948 heart part_of GO:0061042 vascular wound healing ISS
GO:0033554 cellular response to stress FoldBasedPredictor GO:1905205 positive regulation of connective tissue replacement part_of GO:0033554 cellular response to stress occurs_in UBERON:0000948 heart part_of GO:0061042 vascular wound healing ISS
GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway FoldBasedPredictor GO:0035195 miRNA-mediated post-transcriptional gene silencing has_input UniProtKB:P36897 part_of GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IDA