#Line number RuleID ViolationType Message Line #------------ #------------ # Validation for #137642 annotations in 137661 lines #------------ #Line number RuleID ViolationType Message Line #------------ # GO_AR:0000014 Valid GO term ID Error count: 4 102990 GO_AR:0000014 Error The relation 'has_agent' in the c16 annotation extension is an obsolete relation UniProtKB P05067 APP GO:0000185 PMID:15190117 IGI ComplexPortal:CPX-1134 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20170614 ARUK-UCL occurs_in(UBERON:0002421),part_of(GO:0045666),has_agent(GO:0106003) UniProtKB:P05067:PRO_0000000092 103260 GO_AR:0000014 Error The relation 'has_agent' in the c16 annotation extension is an obsolete relation UniProtKB P05067 APP GO:0043410 PMID:15190117 IGI ComplexPortal:CPX-1134 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20170614 ARUK-UCL occurs_in(UBERON:0002421),part_of(GO:0045666),has_agent(GO:0106003) UniProtKB:P05067:PRO_0000000092 103268 GO_AR:0000014 Error The relation 'has_agent' in the c16 annotation extension is an obsolete relation UniProtKB P05067 APP GO:0045666 PMID:15190117 IGI ComplexPortal:CPX-1134 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20170614 ARUK-UCL occurs_in(UBERON:0002421),has_agent(GO:0106003) UniProtKB:P05067:PRO_0000000092 103300 GO_AR:0000014 Error The relation 'has_agent' in the c16 annotation extension is an obsolete relation UniProtKB P05067 APP GO:0061098 PMID:15190117 IGI ComplexPortal:CPX-1134 P Amyloid-beta precursor protein APP|A4|AD1 protein taxon:9606 20170614 ARUK-UCL occurs_in(UBERON:0002421),part_of(GO:0045666),has_agent(GO:0106003) UniProtKB:P05067:PRO_0000000092 #------------ # GO_AR:0000008 No annotations should be made to uninformative high level terms Warning count: 8 1536 GO_AR:0000008 Warning Do not annotate to: GO:0032623 'interleukin-2 production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB A0A087WV17 OSCAR GO:0032623 GO_REF:0000107 IEA UniProtKB:Q8VBT3|ensembl:ENSMUSP00000041306 P Ig-like domain-containing protein OSCAR protein taxon:9606 20200714 Ensembl UniProtKB:A0A087WV17 7981 GO_AR:0000008 Warning Do not annotate to: GO:0001816 'cytokine production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB A0A0C4DFM7 TUT4 GO:0001816 GO_REF:0000107 IEA UniProtKB:B2RX14|ensembl:ENSMUSP00000044836 P Terminal uridylyltransferase 4 TUT4 protein taxon:9606 20200714 Ensembl UniProtKB:A0A0C4DFM7 42095 GO_AR:0000008 Warning Do not annotate to: GO:0032609 'interferon-gamma production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB C9JUK7 SPN GO:0032609 GO_REF:0000002 IEA InterPro:IPR038829 P Leukosialin SPN protein taxon:9606 20200919 InterPro UniProtKB:C9JUK7 50114 GO_AR:0000008 Warning Do not annotate to: GO:0007093 'mitotic cell cycle checkpoint' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB E7EPP6 CHEK1 GO:0007093 GO_REF:0000107 IEA UniProtKB:O35280|ensembl:ENSMUSP00000134388 P Protein kinase domain-containing protein CHEK1 protein taxon:9606 20200714 Ensembl UniProtKB:E7EPP6 66118 GO_AR:0000008 Warning Do not annotate to: GO:0001816 'cytokine production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB F8WCM8 EPHB6 GO:0001816 GO_REF:0000107 IEA UniProtKB:O08644|ensembl:ENSMUSP00000110380 P Ephrin type-B receptor 6 EPHB6 protein taxon:9606 20200714 Ensembl UniProtKB:F8WCM8 108266 GO_AR:0000008 Warning Do not annotate to: GO:0071954 'chemokine (C-C motif) ligand 11 production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P49682 CXCR3 GO:0071954 PMID:12782716 IDA P C-X-C chemokine receptor type 3 CXCR3|GPR9 protein taxon:9606 20131126 UniProt UniProtKB:P49682-1 108267 GO_AR:0000008 Warning Do not annotate to: GO:0071954 'chemokine (C-C motif) ligand 11 production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB P49682 CXCR3 GO:0071954 PMID:12782716 IDA P C-X-C chemokine receptor type 3 CXCR3|GPR9 protein taxon:9606 20131126 UniProt UniProtKB:P49682-2 136233 GO_AR:0000008 Warning Do not annotate to: GO:0001816 'cytokine production' The term is considered to high level, as marked via the subset tag: gocheck_do_not_annotate UniProtKB U3KQS2 SLC37A4 GO:0001816 GO_REF:0000107 IEA UniProtKB:Q9D1F9|ensembl:ENSMUSP00000150843 P MFS domain-containing protein SLC37A4 protein taxon:9606 20200714 Ensembl UniProtKB:U3KQS2 #------------ # GO_AR:0000011 ND annotations to root nodes only Warning count: 1 134747 GO_AR:0000011 Warning ND annotations to root require reference ID UniProtKB Q9Y4H5 GPSM3 GO:0003674 PMID:2259622 ND F G-protein-signaling modulator 3 GPSM3|G18.1a protein taxon:9606 20061026 UniProt UniProtKB:Q9Y4H5 #------------