Table of contents

Summary

GAF summary

Found 1440 annotations in 1452 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there are 3 violations with type Error.

For rule GO_AR:0000018 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000018) IPI annotations require a With/From entry, there are 94 violations with type Warning.

GAF Prediction Summary

Found 23 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf

Report

SUMMARY

STATISTICS

MESSAGES

WARNING

OWLTools check

#Line number RuleID ViolationType Message Line
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# Validation for #1440 annotations in 1452 lines
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#Line number RuleID ViolationType Message Line
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# GO_AR:0000014 Valid GO term ID Error count: 3
1078 GO_AR:0000014 Error The id 'GO:0001191' in the annotation is an obsolete class ComplexPortal CPX-514 cmyc_bin1_human GO:0001191 PMID:8782822 IDA F c-MYC-BIN1 complex BIN1:MYC protein_complex taxon:9606 20161014 ComplexPortal
1309 GO_AR:0000014 Error The id 'GO:0001076' in the annotation is an obsolete class ComplexPortal CPX-79 rap30-rap74_human GO:0001076 PMID:15351637 IDA F Transcription factor TFIIF complex GTF2F1:GTF2F2|TFIIF complex|General transcription factor IIF complex|RNA polymerase II preinitiation complex TFIIF|RAP30-RAP74 complex protein_complex taxon:9606 20150629 ComplexPortal
1385 GO_AR:0000014 Error The id 'GO:0001076' in the annotation is an obsolete class ComplexPortal CPX-915 tfiid_human GO:0001076 PMID:27007846 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
#------------
# GO_AR:0000018 IPI annotations require a With/From entry Warning count: 94
13 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1012 tenascin-w_human GO:0005178 PMID:17909022 IPI F Tenascin-W complex TNN hexamer|Tenascin W complex protein_complex taxon:9606 20170313 ComplexPortal
19 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1014 tenascin-x_human GO:0098639 PMID:17033827 IPI F Tenascin-X complex TNXB trimer|Tenascin X complex|TNX complex|TN-X complex|Flexilin complex protein_complex taxon:9606 20170313 ComplexPortal
28 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1032 snurportin_human GO:0000341 PMID:9670026 IPI F Importin complex, Snurportin variant Snurportin complex|Importin complex, SNUPN variant|KPNB1:SNUPN protein_complex taxon:9606 20170608 ComplexPortal
37 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1062 abeta-40-42_human GO:0046872 PMID:26898943 IPI F Amyloid-beta protein 40/42 complex beta-amyloid protein 40/42 heterodimer|beta-amyloid protein 40/42 complex|beta-amyloid-40/42 complex|beta amyloid protein 40/42 complex|amyloid-beta-40/42 complex|amyloid beta protein 40/42 complex|amyloid-beta protein 40/42 heterodimer|amyloid-beta-40/42 heterodimer|amyloid beta protein 40/42 heterodimer|beta-amyloid-40/42 heterodimer|beta amyloid protein 40/42 heterodimer|Abeta protein 40/42 complex|APP dimer protein_complex taxon:9606 20170410 ComplexPortal
48 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1069 abeta-40_human GO:0046872 PMID:26898943 IPI F Amyloid-beta protein 40 complex beta-amyloid protein 40 homodimer|beta-amyloid protein 40 complex|beta-amyloid-40 complex|beta amyloid protein 40 complex|amyloid-beta-40 complex|amyloid beta protein 40 complex|amyloid-beta protein 40 homodimer|amyloid-beta-40 homodimer|amyloid beta protein 40 homodimer|beta-amyloid-40 homodimer|beta amyloid protein 40 homodimer|APP dimer|Abeta protein 40 complex protein_complex taxon:9606 20170410 ComplexPortal
63 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1070 abeta-42_human GO:0046872 PMID:26898943 IPI F Amyloid-beta protein 42 complex beta-amyloid protein 42 homodimer|beta-amyloid protein 42 complex|beta-amyloid-42 complex|beta amyloid protein 42 complex|amyloid-beta-42 complex|amyloid beta protein 42 complex|amyloid-beta protein 42 homodimer|amyloid-beta-42 homodimer|amyloid beta protein 42 homodimer|beta-amyloid-42 homodimer|beta amyloid protein 42 homodimer|APP dimer|Abeta protein 42 complex protein_complex taxon:9606 20170410 ComplexPortal
83 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1072 prkra-risc_complex_human GO:0003725 PMID:23661684 IPI F RISC-loading complex, PRKRA variant AGO2:DICER1:PRKRA|miRLC complex|RLC complex|microRNA loading complex|PACT-containing RISC-loading complex protein_complex taxon:9606 20170410 ComplexPortal
87 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1072 prkra-risc_complex_human GO:0035198 PMID:23661684 IPI F RISC-loading complex, PRKRA variant AGO2:DICER1:PRKRA|miRLC complex|RLC complex|microRNA loading complex|PACT-containing RISC-loading complex protein_complex taxon:9606 20170410 ComplexPortal
91 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1076 mcrd-polya-bridging_human GO:0008143 PMID:11051545 IPI F mCRD-poly(A)-bridging complex major coding region determinant of instability-mediated mRNA stability complex|major coding-region instability determinant - poly(A) tail-bridging complex|CSDE1:HNRNPD:PABPC1:PAIP1:SYNCRIP|major coding-region determinant of instability - poly(A) tail-bridging complex|mCRD-mediated mRNA stability complex|major coding region instability determinant-mediated mRNA stability complex protein_complex taxon:9606 20170410 ComplexPortal
94 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1076 mcrd-polya-bridging_human GO:1990825 PMID:11051545 IPI F mCRD-poly(A)-bridging complex major coding region determinant of instability-mediated mRNA stability complex|major coding-region instability determinant - poly(A) tail-bridging complex|CSDE1:HNRNPD:PABPC1:PAIP1:SYNCRIP|major coding-region determinant of instability - poly(A) tail-bridging complex|mCRD-mediated mRNA stability complex|major coding region instability determinant-mediated mRNA stability complex protein_complex taxon:9606 20170410 ComplexPortal
99 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1080 crd-mrna_human GO:1990825 PMID:19029303 IPI F CRD-mediated mRNA stability complex DHX9:HNRNPU:IGF2BP1:SYNCRIP:YBX1|coding-region determinant of instability-mediated mRNA stability complex|coding-region instability determinant -mediated mRNA stability complex protein_complex taxon:9606 20170410 ComplexPortal
104 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1097 c2u-editosome_human GO:1990825 PMID:11134005 IPI F C-to-U editosome complex ABBP1-ACF-APOBEC1-GRYRBP complex|ABBP1-ASF-APOBEC1-GRYRBP complex|ApoB mRNA editing enzyme complex|Apolipoprotein B mRNA-editing enzyme complex|APOBEC-1 editosome complex|APOBEC1 editosome complex|C to U editosome complex|ApoB mRNA-editing enzyme complex|2xAPOBEC1:A1CF:HNRNPAB:SYNCRIP|Apolipoprotein B mRNA editing enzyme complex protein_complex taxon:9606 20170410 ComplexPortal
106 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1099 b-wich_human GO:0019843 PMID:16603771 IPI F B-WICH chromatin remodelling complex BAZ1B:DDX21:DEK:ERCC6:MYBBP1A:MYO1C:SF3B1:SMARCA5 protein_complex taxon:9606 20170608 ComplexPortal
123 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1123 foxo3-myc_human GO:0000978 PMID:18393360 IPI F FOXO3-MYC complex FOXO3:MYC protein_complex taxon:9606 20170712 ComplexPortal
329 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-114 gp1b_human GO:0007597 PMID:10501658 IPI P Glycoprotein Ib-IX-V complex CD42|GPIb-V-IX complex|2xGP1BA:2xGP1BB:2xGP5:GP9|GPIb-IX-V complex protein_complex taxon:9606 20150629 ComplexPortal
386 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-134 tarbp2-risc_complex_human GO:0003725 PMID:23661684 IPI F RISC-loading complex, TARBP2 variant AGO2:DICER1:TARBP2|miRLC complex|RLC complex|microRNA loading complex protein_complex taxon:9606 20170309 ComplexPortal
395 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-134 tarbp2-risc_complex_human GO:0035198 PMID:16271387 IPI F RISC-loading complex, TARBP2 variant AGO2:DICER1:TARBP2|miRLC complex|RLC complex|microRNA loading complex protein_complex taxon:9606 20170309 ComplexPortal
403 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1427 cbc_human GO:0000339 PMID:8069914 IPI F Nuclear cap-binding complex CBP20-CBP80 complex|CBC|NCBP1:NCBP2|Cap complex protein_complex taxon:9606 20180214 ComplexPortal
404 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1427 cbc_human GO:0000340 PMID:8069914 IPI F Nuclear cap-binding complex CBP20-CBP80 complex|CBC|NCBP1:NCBP2|Cap complex protein_complex taxon:9606 20180214 ComplexPortal
405 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1427 cbc_human GO:0003729 PMID:8069914 IPI F Nuclear cap-binding complex CBP20-CBP80 complex|CBC|NCBP1:NCBP2|Cap complex protein_complex taxon:9606 20180214 ComplexPortal
407 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1427 cbc_human GO:0006406 PMID:21326824 IPI P Nuclear cap-binding complex CBP20-CBP80 complex|CBC|NCBP1:NCBP2|Cap complex protein_complex taxon:9606 20180214 ComplexPortal
422 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1605 mettl3-mettl14-wtap_human GO:0003729 PMID:24316715 IPI F WMM N6-adenosine-methyltransferase complex METTL3:METTL14:WTAP|WTAP-METTL3-METTL14 N6-adenosine-methyltransferase complex|WTAP-METTL3-METTL14 methyltransferase complex|WMM methyltransferase complex protein_complex taxon:9606 20180214 ComplexPortal
432 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-17 tert-terc_human GO:0000333 PMID:19701182 IPI C Telomerase catalytic core complex 2xTERT:2xTERC protein_complex taxon:9606 20150219 BHF-UCL
441 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-17 tert-terc_human GO:0005697 PMID:19701182 IPI C Telomerase catalytic core complex 2xTERT:2xTERC protein_complex taxon:9606 20150219 BHF-UCL
487 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1941 ejc_human GO:0003727 PMID:16931718 IPI F Exon junction core complex, MAGOH variant EJC|exon-exon junction complex|CASC3:EIF4A3:MAGOH:RBM8A protein_complex taxon:9606 20160913 ComplexPortal
501 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-1993 ku70_80_human GO:0003690 PMID:11493912 IPI F Ku70:Ku80 complex Ku70:Ku86 complex|G22P1:G22P2 complex|XRCC5:XRCC6|Ku complex protein_complex taxon:9606 20141016 ComplexPortal
614 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-2194 rrm1-rrm2_human GO:0000287 PMID:21336276 IPI F Ribonucleoside-diphosphate reductase RR1 complex, RRM2 variant RRM1:RRM2|Ribonucleotide diphosphate reductase RR1 complex|Class I ribonucleotide reductase complex|RNR complex|RIR1-RIR2 complex|Class I RR complex protein_complex taxon:9606 20160411 ComplexPortal
617 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-2194 rrm1-rrm2_human GO:0008199 PMID:24253041 IPI F Ribonucleoside-diphosphate reductase RR1 complex, RRM2 variant RRM1:RRM2|Ribonucleotide diphosphate reductase RR1 complex|Class I ribonucleotide reductase complex|RNR complex|RIR1-RIR2 complex|Class I RR complex protein_complex taxon:9606 20160411 ComplexPortal
658 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-2375 tapasin-erp57_human GO:0042605 PMID:17603487 IPI F Tapasin-ERp57 complex PDIA3:TAPBP protein_complex taxon:9606 20160804 ComplexPortal
702 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-2808 fvii-tf_human GO:0016021 PMID:18640965 IPI C Factor VII - TF complex Coagulation Factor VII - Tissue Factor complex|Factor VII - Tissue Factor complex|FVIIa - TF complex|F7-F3 complex|Coagulation Factor VIIa - Tissue Factor complex|Coagulation Factor VII - Tissue Factor 3 complex|Coagulation Factor VIIa - Tissue Factor 3 complex|FA7 - TF3 complex|F3:F7light:F7heavy protein_complex taxon:9606 20151021 ComplexPortal
715 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-308 ddb1-ddb2_human GO:0003684 PMID:22822215 IPI F UV DNA damage recognition complex DBB1-DBB2 DDB1:DDB2|UV-DDB protein_complex taxon:9606 20170608 ComplexPortal
740 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-316 ctnnb1-lef1_human GO:0000977 PMID:11751639 IPI F beta1-catenin - LEF1 complex CTNNB1:LEF1 protein_complex taxon:9606 20160113 ComplexPortal
869 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-369 rrm1-rrm2b_human GO:0000287 PMID:21336276 IPI F Ribonucleoside-diphosphate reductase RR1 complex, RRM2B variant RRM1:RRM2B|Ribonucleotide diphosphate reductase RR1 complex|Class I ribonucleotide reductase complex|RNR complex|RIR1-RIR2B complex|p53-inducible ribonucleotide reductase complex|Class I RR complex protein_complex taxon:9606 20160411 ComplexPortal
875 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-369 rrm1-rrm2b_human GO:0008199 PMID:19728742 IPI F Ribonucleoside-diphosphate reductase RR1 complex, RRM2B variant RRM1:RRM2B|Ribonucleotide diphosphate reductase RR1 complex|Class I ribonucleotide reductase complex|RNR complex|RIR1-RIR2B complex|p53-inducible ribonucleotide reductase complex|Class I RR complex protein_complex taxon:9606 20160411 ComplexPortal
892 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-381 interleukin12_human GO:0005143 PMID:11114383 IPI F Interleukin-12 complex IL12A:IL12B|p35p40 complex|CLMF|IL12 complex|IL-12 complex|Cytotoxic lymphocyte maturation factor|p35-p40 complex|Natural killer cell stimulatory factor|NKSF protein_complex taxon:9606 20160411 ComplexPortal
925 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-419 fact_human GO:0042393 PMID:10421373 IPI F FACT complex SSRP1:SUPT16H|Human facilitator of chromatin transactions complex|Heterodimeric transcriptional elongation factor FACT protein_complex taxon:9606 20160622 ComplexPortal
956 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-455 rsf1-smarca5_human GO:0031491 PMID:12972596 IPI F RSF complex RSF1:SMARCA5|RSF1:SNF2H complex|XAP8:SMARCA5 complex|RSF chromatin-remodeling complex|RSF1:WCRF135 complex protein_complex taxon:9606 20160713 ComplexPortal
958 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-455 rsf1-smarca5_human GO:0042393 PMID:11691835 IPI F RSF complex RSF1:SMARCA5|RSF1:SNF2H complex|XAP8:SMARCA5 complex|RSF chromatin-remodeling complex|RSF1:WCRF135 complex protein_complex taxon:9606 20160713 ComplexPortal
1006 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-476 exosome-nuclear_human GO:0003723 PMID:17174896 IPI F Nuclear exosome complex, DIS3-EXOSC10 variant DIS3:EXOSC1:EXOSC2:EXOSC3:EXOSC4:EXOSC5:EXOSC6:EXOSC7:EXOSC8:EXOSC9:EXOSC10|Nuclear exosome complex, RRP44-RRP6 variant protein_complex taxon:9606 20160913 ComplexPortal
1023 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-480 nfat-fos-jun_human GO:0001012 PMID:9510247 IPI F AP-1 transcription factor complex FOS-JUN-NFATC2 FOS:JUN:NFATC2 protein_complex taxon:9606 20160913 ComplexPortal
1030 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-482 inip-ints3-nabp2_human GO:0003697 PMID:24630995 IPI F SOSS1 complex INIP:INTS3:NABP2|sensor of ssDNA|IMS1|INTS3-NABP2-C9orf80 complex|INTS3-NABP2-SSBIP1 complex|SOSSA-SOSSB1-SOSSC complex protein_complex taxon:9606 20160913 ComplexPortal
1046 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-486 fos_jun_human GO:0001012 PMID:7816143 IPI F AP-1 transcription factor complex FOS-JUN AP-1 complex|FOS-JUN complex|c-FOS/c-JUN complex|FOS:JUN protein_complex taxon:9606 20160913 ComplexPortal
1060 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-490 c-jun_human GO:0001012 PMID:17283046 IPI F AP-1 transcription factor complex JUN dimer c-JUN homodimer|JUN dimer|AP-1 transcription factor complex|JUN homodimer protein_complex taxon:9606 20160913 ComplexPortal
1076 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-511 eme1-mus81_human GO:0070337 PMID:24733841 IPI F Deoxyribonuclease complex MUS81-EME1 EME1:MUS81|MUS81-MMS4 endonuclease complex|Deoxyribonuclease complex MUS81-MMS4|MUS81 complex protein_complex taxon:9606 20160913 ComplexPortal
1081 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-519 tfiia_human GO:0000978 PMID:12972251 IPI F Transcription factor IIA complex TFIIA complex|Transcription initiation factor IIA complex|GTF2A1:GTF2A2 protein_complex taxon:9606 20161014 ComplexPortal
1105 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-553 isocit_dh_human GO:0051287 PMID:14555658 IPI F Mitochondrial isocitrate dehydrogenase complex (NAD+) Isocitrate dehydrogenase (NAD+) holoenzyme|NAD-dependent isocitrate dehydrogenase|Isocitrate dehydrogenase holoenzyme|threo-Ds-isocitrate:NAD+ oxidoreductase (decarboxylating)|IDH|beta-ketoglutaric-isocitric carboxylase|nicotinamide adenine dinucleotide isocitrate dehydrogenase|NAD isocitrate dehydrogenase|NAD isocitric dehydrogenase|NAD-linked isocitrate dehydrogenase|NAD-specific isocitrate dehydrogenase|isocitric acid dehydrogenase|isocitric dehydrogenase|4xIDH3A:2xIDH3B:2xIDH3G protein_complex taxon:9606 20180201 ComplexPortal
1112 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-586 eme2-mus81_human GO:0070337 PMID:17289582 IPI F Deoxyribonuclease complex MUS81-EME2 MUS81-MMS4 endonuclease complex|EME2:MUS81|MUS81 complex|Deoxyribonuclease complex MUS81-MMS4 protein_complex taxon:9606 20160913 ComplexPortal
1114 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-591 exosome-nucleolar_human GO:0003723 PMID:17174896 IPI F Nucleolar exosome complex, EXOSC10 variant EXOSC1:EXOSC2:EXOSC3:EXOSC4:EXOSC5:EXOSC6:EXOSC7:EXOSC8:EXOSC9:EXOSC10|Nuclear exosome complex, RRP6 variant protein_complex taxon:9606 20160913 ComplexPortal
1120 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-592 exosome-cytoplasmic1_human GO:0003723 PMID:20531386 IPI F Cytoplasmic exosome complex, DIS3L variant DIS3L:EXOSC1:EXOSC2:EXOSC3:EXOSC4:EXOSC5:EXOSC6:EXOSC7:EXOSC8:EXOSC9 protein_complex taxon:9606 20160913 ComplexPortal
1126 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-593 exosome-dis3variant_human GO:0003723 PMID:17174896 IPI F Exosome complex, DIS3 variant DIS3:EXOSC1:EXOSC2:EXOSC3:EXOSC4:EXOSC5:EXOSC6:EXOSC7:EXOSC8:EXOSC9|Nuclear exosome complex, RRP44 variant protein_complex taxon:9606 20160913 ComplexPortal
1135 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-600 exosome-cytoplasmic2_human GO:0003723 PMID:20531386 IPI F Cytoplasmic exosome complex, DIS3L-EXOSC10 variant Nuclear exosome complex, DIS3L-RRP6 variant|DIS3L:EXOSC1:EXOSC2:EXOSC3:EXOSC4:EXOSC5:EXOSC6:EXOSC7:EXOSC8:EXOSC9:EXOSC10 protein_complex taxon:9606 20160913 ComplexPortal
1140 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-602 tgfb1_human-1 GO:0005160 PMID:20207738 IPI F TGF-beta-1 complex TGFB1 dimer|TGF-beta-1 homodimer|TGFB1 complex|TGFB1 homodimer|Transforming growth factor beta-1 protein_complex taxon:9606 20161219 ComplexPortal
1144 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-605 tgfb2_human-1 GO:0005160 PMID:20207738 IPI F TGF-beta-2 complex TGFB2 dimer|Transforming growth factor beta-2|TGF-beta-2 homodimer|TGFB2 homodimer|TGFB2 complex protein_complex taxon:9606 20161219 ComplexPortal
1147 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-606 tgfb3_human-1 GO:0005160 PMID:18243111 IPI F TGF-beta-3 complex TGFB3 complex|TGFB3 homodimer|TGF-beta-3 homodimer|Transforming growth factor beta-3|TGFB3 dimer protein_complex taxon:9606 20161219 ComplexPortal
1158 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-631 rxra-vdr_human GO:0070644 PMID:15225774 IPI F RXRalpha-VDR nuclear hormone receptor complex RXRA:VDR|NR2B1-NR1I1 complex|RXRalpha-VDR retinoic acid receptor complex protein_complex taxon:9606 20161219 ComplexPortal
1159 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-631 rxra-vdr_human GO:1902098 PMID:8164684 IPI F RXRalpha-VDR nuclear hormone receptor complex RXRA:VDR|NR2B1-NR1I1 complex|RXRalpha-VDR retinoic acid receptor complex protein_complex taxon:9606 20161219 ComplexPortal
1160 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-632 rxra-lxra_human GO:0001972 PMID:7744246 IPI F RXRalpha-LXRalpha nuclear hormone receptor complex NR2B1-NR1H3 complex|NR1H3:RXRA protein_complex taxon:9606 20161014 ComplexPortal
1164 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-632 rxra-lxra_human GO:0044323 PMID:7744246 IPI F RXRalpha-LXRalpha nuclear hormone receptor complex NR2B1-NR1H3 complex|NR1H3:RXRA protein_complex taxon:9606 20161014 ComplexPortal
1172 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-654 rxra-thrb_human GO:0044323 PMID:7746322 IPI F RXRalpha-TRbeta nuclear hormone receptor complex RXRA:THRB|Thyroid hormone receptor complex|NR2B1-NR1A2 complex protein_complex taxon:9606 20161219 ComplexPortal
1174 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-654 rxra-thrb_human GO:0070324 PMID:26289479 IPI F RXRalpha-TRbeta nuclear hormone receptor complex RXRA:THRB|Thyroid hormone receptor complex|NR2B1-NR1A2 complex protein_complex taxon:9606 20161219 ComplexPortal
1185 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-664 rxra-rxra_human GO:0044323 PMID:10669605 IPI F RXRalpha-RXRalpha retinoic acid receptor complex RXRA:RXRA|NR2B1:NR2B1 complex protein_complex taxon:9606 20161014 ComplexPortal
1192 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-688 nurf_human GO:0001047 PMID:14609955 IPI F NuRF chromatin remodelling complex SNF2L complex|nucleosome-remodeling factor|BPTF:RBBP4:RBBP7:SNF2L1 complex|BPTF:RBBP4:RBBP7:SMARCA1 |BPTF:RBBP4:RBBP7:SNF2L complex|FAC1:RBBP4:RBBP7:SMARCA1 complex|FALZ:RBBP4:RBBP7:SMARCA1 complex|BPTF:RBAP48:RBBP7:SMARCA1 complex|BPTF:RBBP4:RBAP46:SMARCA1 complex protein_complex taxon:9606 20161014 ComplexPortal
1196 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-688 nurf_human GO:0035064 PMID:16728976 IPI F NuRF chromatin remodelling complex SNF2L complex|nucleosome-remodeling factor|BPTF:RBBP4:RBBP7:SNF2L1 complex|BPTF:RBBP4:RBBP7:SMARCA1 |BPTF:RBBP4:RBBP7:SNF2L complex|FAC1:RBBP4:RBBP7:SMARCA1 complex|FALZ:RBBP4:RBBP7:SMARCA1 complex|BPTF:RBAP48:RBBP7:SMARCA1 complex|BPTF:RBBP4:RBAP46:SMARCA1 complex protein_complex taxon:9606 20161014 ComplexPortal
1298 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-77 msh2-msh3_human GO:0005524 PMID:19228687 IPI F DNA mismatch repair MutSbeta complex MSH2:MSH3|DNA lesion recognition complex MutSbeta|MutS heterodimer protein_complex taxon:9606 20150629 ComplexPortal
1301 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-77 msh2-msh3_human GO:0030983 PMID:8942985 IPI F DNA mismatch repair MutSbeta complex MSH2:MSH3|DNA lesion recognition complex MutSbeta|MutS heterodimer protein_complex taxon:9606 20150629 ComplexPortal
1302 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-785 chrac_human GO:0000182 PMID:14759371 IPI F CHRAC chromatin remodeling complex BAZ1A:CHRAC1:POLE3:SMARCA5|ACF1:CHRAC1:POLE3:SMARCA5 complex|WCRF180:CHRAC1:POLE3:SMARCA5 complex|HSPC317:CHRAC1:POLE3:SMARCA5 complex|BAZ1A:CHRAC15:POLE3:SMARCA5 complex|BAZ1A:CHRAC1:CHRAC17:SMARCA5 complex|BAZ1A:CHRAC1:POLE3:SNF2H complex|BAZ1A:CHRAC1:POLE3:WCRF135 complex protein_complex taxon:9606 20161219 ComplexPortal
1316 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-80 msh2-msh6_human GO:0000287 PMID:17531815 IPI F DNA mismatch repair MutSalpha complex MSH2:MSH6|DNA lesion recognition complex MutSalpha|MutS heterodimer protein_complex taxon:9606 20150629 ComplexPortal
1317 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-80 msh2-msh6_human GO:0003684 PMID:10078208 IPI F DNA mismatch repair MutSalpha complex MSH2:MSH6|DNA lesion recognition complex MutSalpha|MutS heterodimer protein_complex taxon:9606 20150629 ComplexPortal
1318 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-80 msh2-msh6_human GO:0005524 PMID:17531815 IPI F DNA mismatch repair MutSalpha complex MSH2:MSH6|DNA lesion recognition complex MutSalpha|MutS heterodimer protein_complex taxon:9606 20150629 ComplexPortal
1321 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-809 nsl_human GO:0001047 PMID:25971333 IPI F NSL histone acetyltransferase complex HFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:NSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:MOF:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3: MYST1:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MSP58:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:INO80Q:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:TZP:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:NZF:WDR5 complex|HCF1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|Nonspecific lethal complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5|HCFC1:NSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:MSL1V1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KIAA1267:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:CENP-36:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:NSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KIAA1310:KAT8:MCRS1:OGT:PHF20:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:GLEA2:WDR5 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:PHF20:BIG3 complex|HCFC1:KANSL1:KANSL2:KANSL3:KAT8:MCRS1:OGT:HCA58:WDR5 complex protein_complex taxon:9606 20161219 ComplexPortal
1331 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-816 rxra-rara-ncoa2_human GO:0001972 PMID:21152046 IPI F RXRalpha-RARalpha-NCOA2 retinoic acid receptor complex RXR-RAR-NCOA2 complex|NR1B1-NR2B1-NCOA2 complex|RXRA-RARA-TIF2 complex|2xNCOA2:RARA:RXRA protein_complex taxon:9606 20170131 ComplexPortal
1334 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-846 ino80_human-1 GO:0001047 PMID:26340092 IPI F INO80 chromatin remodeling complex ACTL6A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:Amida:YY1:UCHL5|ARP4:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5|BAF53A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5|ACTL6A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5 protein_complex taxon:9606 20161219 ComplexPortal
1338 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-846 ino80_human-1 GO:0035326 PMID:27641337 IPI F INO80 chromatin remodeling complex ACTL6A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:Amida:YY1:UCHL5|ARP4:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5|BAF53A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5|ACTL6A:ACTR5:ACTR8:INO80B:INO80C:INO80D:INO80E:INO80:MCRS1:NFRKB:RUVBL1:RUVBL2:TFPT:YY1:UCHL5 protein_complex taxon:9606 20161219 ComplexPortal
1363 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-900 saga _human GO:0002039 PMID:18250150 IPI F SAGA complex STAGA complex|SPT3-TAF9-GCN5 Acetyltransferase complex|Spt-Ada-Gcn5-acetyltrasferase complex|ATXN7:ATXN7L3:ENY2:KAT2A:SGF29:SUPT20H:SUPT3H:SUPT7L:TADA1:TADA2B:TADA3:TAF2:TAF5L:TAF6L:TAF8:TAF9:TAF10:TAF12:TRRAP:USP22 protein_complex taxon:9606 20180406 ComplexPortal
1376 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-903 tftc_human GO:0003684 PMID:11406595 IPI F TFTC histone acetylation complex ATXN7:ATXN7L3:ENY2:KAT2A:SUPT3H:TADA3:TAF2:TAF4:TAF5:TAF5L:TAF6:TAF7:TAF9:TAF10:TAF12:TRRAP:USP22|TBP-free TAFII-containing complex|TBP-free TAF complex protein_complex taxon:9606 20180406 ComplexPortal
1382 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-91 myc-max_human GO:0070888 PMID:12553908 IPI F Transcriptional activator Myc-Max complex MAX:MYC protein_complex taxon:9606 20150629 ComplexPortal
1383 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0000977 PMID:23332750 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1385 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0001076 PMID:27007846 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1386 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0001228 PMID:17884155 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1393 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0035064 PMID:17884155 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1395 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0051123 PMID:27007846 IPI P General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1397 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-915 tfiid_human GO:0070577 PMID:8980232 IPI F General transcription factor complex TFIID TAF1:TAF2:TAF3:2xTAF4:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID protein_complex taxon:9606 20161219 ComplexPortal
1398 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-92 galectin-1_human GO:0030246 PMID:15476813 IPI F Galectin-1 complex LGALS1 dimer|Beta-galactoside-binding lectin L-14-I complex|Lactose-binding lectin 1 complex protein_complex taxon:9606 20150629 ComplexPortal
1400 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-92 galectin-1_human GO:0043236 PMID:1386213 IPI F Galectin-1 complex LGALS1 dimer|Beta-galactoside-binding lectin L-14-I complex|Lactose-binding lectin 1 complex protein_complex taxon:9606 20150629 ComplexPortal
1406 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-922 mbd3/nurd_human GO:0042393 PMID:27098840 IPI F MBD3/NuRD nucleosome remodeling and deacetylase complex Mi-2/NuRD complex|nucleosome remodeling and deacetylase complex|Mi-2 complex|CHD3:CHD4:GATAD2A:GATAD2B:2xHDAC1:HDAC2:MBD3:2xMTA1:MTA2:MTA3:RBBP4:RBBP7 protein_complex taxon:9606 20170131 ComplexPortal
1408 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-930 tfiid-taf4bvariant_human GO:0001228 PMID:17884155 IPI F General transcription factor complex TFIID, TAF4B variant TAF1:TAF2:TAF3:2xTAF4B:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID, variant TAF4B protein_complex taxon:9606 20170131 ComplexPortal
1413 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-930 tfiid-taf4bvariant_human GO:0035064 PMID:17884155 IPI F General transcription factor complex TFIID, TAF4B variant TAF1:TAF2:TAF3:2xTAF4B:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID, variant TAF4B protein_complex taxon:9606 20170131 ComplexPortal
1416 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-930 tfiid-taf4bvariant_human GO:0070577 PMID:8980232 IPI F General transcription factor complex TFIID, TAF4B variant TAF1:TAF2:TAF3:2xTAF4B:2xTAF5:2xTAF6:TAF7:TAF8:2xTAF9:TAF10:TAF11:2xTAF12:TAF13:TBP|Transcription factor complex IID, variant TAF4B protein_complex taxon:9606 20170131 ComplexPortal
1417 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-95 galectin-2_human GO:0030395 PMID:8262940 IPI F Galectin-2 complex Beta-galactoside-binding lectin L-14-II|LGALS2 dimer|S-Lac lectin 2 protein_complex taxon:9606 20150629 ComplexPortal
1424 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-973 c3b_human GO:0001848 PMID:21205667 IPI F Complement C3b complex C3b dimer protein_complex taxon:9606 20170131 ComplexPortal
1430 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-974 srcap_human-1 GO:0042393 PMID:15647280 IPI F SRCAP histone exchanging complex ACTL6A:ACTR6:DMAP1:RUVBL1:RUVBL2:SRCAP:VPS72:YEATS4:ZNHIT1|SRCAP-containing complex|ACTL6A:ACTR6:DMAP1:RUVBL1:RUVBL2:SWI2/SNF2-related CBP activator protein:VPS72:YEATS4:ZNHIT1 complex protein_complex taxon:9606 20170131 ComplexPortal
1442 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-997 g-atac_human GO:0001047 PMID:19936620 IPI F GCN5-containing ATAC complex DR1:KAT14:KAT2A:MBIP:SGF29:TADA2A:TADA3:WDR5:YEATS2:ZZZ3|ADA2A-containing complex|Ada2/Gcn5/Ada3 transcription activator complex|KAT2A-containing ATAC complex|ATAC complex|G-ATAC complex|Ada two A containing complex protein_complex taxon:9606 20170313 ComplexPortal
1443 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-997 g-atac_human GO:0001085 PMID:22055187 IPI F GCN5-containing ATAC complex DR1:KAT14:KAT2A:MBIP:SGF29:TADA2A:TADA3:WDR5:YEATS2:ZZZ3|ADA2A-containing complex|Ada2/Gcn5/Ada3 transcription activator complex|KAT2A-containing ATAC complex|ATAC complex|G-ATAC complex|Ada two A containing complex protein_complex taxon:9606 20170313 ComplexPortal
1447 GO_AR:0000018 Warning IPI annotations require a With/From entry ComplexPortal CPX-997 g-atac_human GO:0035326 PMID:22055187 IPI F GCN5-containing ATAC complex DR1:KAT14:KAT2A:MBIP:SGF29:TADA2A:TADA3:WDR5:YEATS2:ZZZ3|ADA2A-containing complex|Ada2/Gcn5/Ada3 transcription activator complex|KAT2A-containing ATAC complex|ATAC complex|G-ATAC complex|Ada two A containing complex protein_complex taxon:9606 20170313 ComplexPortal
#------------

Predictions

GO:0043984 histone H4-K16 acetylation AnnotationPropagation P GO:0046972 histone acetyltransferase activity (H4-K16 specific) IDA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IDA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IDA
GO:0016311 dephosphorylation AnnotationPropagation P GO:0016791 phosphatase activity IDA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0010466 negative regulation of peptidase activity AnnotationPropagation P GO:0030414 peptidase inhibitor activity IDA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990599 3' overhang single-stranded DNA endodeoxyribonuclease activity IMP
GO:0090305 nucleic acid phosphodiester bond hydrolysis AnnotationPropagation P GO:1990599 3' overhang single-stranded DNA endodeoxyribonuclease activity IMP
GO:0005623 cell AnnotationPropagation C GO:0051209 release of sequestered calcium ion into cytosol IDA
GO:0006479 protein methylation AnnotationPropagation P GO:0008276 protein methyltransferase activity IDA
GO:0005623 cell AnnotationPropagation C GO:1905665 positive regulation of calcium ion import across plasma membrane IGI
GO:0005739 mitochondrion AnnotationPropagation C GO:1901029 negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway IDA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006468 protein phosphorylation AnnotationPropagation P GO:0097472 cyclin-dependent protein kinase activity IDA
GO:0006303 double-strand break repair via nonhomologous end joining FoldBasedPredictor GO:1990599 3' overhang single-stranded DNA endodeoxyribonuclease activity occurs_at GO:0000784 nuclear chromosome, telomeric region part_of GO:0006303 double-strand break repair via nonhomologous end joining IMP
GO:0097458 neuron part FoldBasedPredictor GO:0098978 glutamatergic synapse part_of CL:0002608 hippocampal neuron IDA
GO:0033554 cellular response to stress FoldBasedPredictor GO:2000363 positive regulation of prostaglandin-E synthase activity has_output CHEBI:15551 occurs_in CL:0000540 neuron occurs_in UBERON:0001891 midbrain part_of GO:0033554 cellular response to stress regulates_o_occurs_in CL:0000243 glial cell (sensu Vertebrata) ISS
GO:0007596 blood coagulation FoldBasedPredictor GO:0016485 protein processing has_direct_input UniProtKB:P00742 occurs_in CL:0002618 endothelial cell of umbilical vein part_of GO:0007596 blood coagulation IDA

Predictions (experimental)