Table of contents

Summary

GAF summary

Found 13188 annotations in 13207 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000005 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000005) No ISS or ISS-related annotations to 'protein binding ; GO:0005515', there are 3 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 3 violations with type Warning.

For rule GO_AR:0000014 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000014) Valid GO term ID, there is one violation with type Warning.

GAF Prediction Summary

No inferences or predictions to report.

Used Ontology Summary

go/extensions/go-gaf

Report

Group: goa - Dataset: goa_dog_isoform

SUMMARY

This report generated on 2018-10-18

Contents

gorule-0000027

other

MESSAGES

gorule-0000027

Each identifier in GAF is valid

Messages

other

OWLTools check

#Line number RuleID ViolationType Message Line
#------------
#------------
# Validation for #13188 annotations in 13207 lines
#------------
#Line number RuleID ViolationType Message Line
#------------
# GO_AR:0000005 No ISS or ISS-related annotations to 'protein binding ; GO:0005515' Error count: 3
5812 GO_AR:0000005 Error No ISS or ISS-related annotations to 'protein binding ; GO:0005515' UniProtKB F1PI70 B9D2 GO:0005515 GO_REF:0000024 ISS UniProtKB:P01137 F Uncharacterized protein B9D2 protein taxon:9615 20141202 AgBase
9942 GO_AR:0000005 Error No ISS or ISS-related annotations to 'protein binding ; GO:0005515' UniProtKB J9NTX5 CRTAP GO:0005515 GO_REF:0000024 ISS UniProtKB:Q90830 F Cartilage associated protein CRTAP protein taxon:9615 20180925 UniProt
10190 GO_AR:0000005 Error No ISS or ISS-related annotations to 'protein binding ; GO:0005515' UniProtKB J9NVL9 PPIB GO:0005515 GO_REF:0000024 ISS UniProtKB:P24367 F Peptidyl-prolyl cis-trans isomerase PPIB protein taxon:9615 20180925 UniProt
#------------
# GO_AR:0000003 Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field Warning count: 3
5812 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field UniProtKB F1PI70 B9D2 GO:0005515 GO_REF:0000024 ISS UniProtKB:P01137 F Uncharacterized protein B9D2 protein taxon:9615 20141202 AgBase
9942 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field UniProtKB J9NTX5 CRTAP GO:0005515 GO_REF:0000024 ISS UniProtKB:Q90830 F Cartilage associated protein CRTAP protein taxon:9615 20180925 UniProt
10190 GO_AR:0000003 Warning Annotations to 'binding' (GO:0005488) and 'protein binding' (GO:0005515) should be made with an IPI evidence code and the interactor in the 'with' field UniProtKB J9NVL9 PPIB GO:0005515 GO_REF:0000024 ISS UniProtKB:P24367 F Peptidyl-prolyl cis-trans isomerase PPIB protein taxon:9615 20180925 UniProt
#------------
# GO_AR:0000014 Valid GO term ID Warning count: 1
9014 GO_AR:0000014 Warning The id 'GO:0015682' in the annotation is an alternate id for: GO:0006826 UniProtKB F6V1W9 LOC477072 GO:0015682 GO_REF:0000108 IEA GO:0015091 P Uncharacterized protein LOC477072 protein taxon:9615 20181006 GOC
#------------

Predictions

Predictions (experimental)