Table of contents

Report

Group: ecocyc - Dataset: ecocyc

SUMMARY

This report generated on 2025-05-25

Header From Original Association File

!gaf-version: 2.2
!generated-by: EcoCyc
!date-generated: 2025-04-25
!URL: https://ecocyc.org
!Project-name: EcoCyc and EcoliWiki collaborative annotation for E. coli K-12
!Project-release: 29.1
!Contact Email: biocyc-support@ai.sri.com
!

Contents

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other

MESSAGES

gorule-0000001

GAF lines are parsed according to GAF 2.2 specifications

Messages

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

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IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations are not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

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IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

Messages

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

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No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

gorule-0000013

Taxon-appropriate annotation check

Messages

gorule-0000015

Dual species taxon check

gorule-0000016

With/From: IC annotations require a With/From GO ID

Messages

gorule-0000017

IDA annotations must not have a With/From entry

Messages

gorule-0000018

IPI annotations require a With/From entry

Messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000022

Check for, and filter, annotations made to retracted publications

Messages

gorule-0000027

Each identifier in GAF is valid

Messages

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

Messages

gorule-0000029

IEAs should be less than one year old.

Messages

gorule-0000030

Obsolete GO_REFs are not allowed

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

Messages

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

gorule-0000043

Check for valid combination of evidence code and GO_REF

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

Messages

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

gorule-0000055

References should have only one ID per ID space

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

gorule-0000061

Allowed gene product to term relations (gp2term)

Messages

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

Messages

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

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Annotations to term that are candidates for obsoletion should be produce a warning

Messages

other

Predictions

GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IMP
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IDA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0009103 lipopolysaccharide biosynthetic process AnnotationPropagation P GO:0008919 lipopolysaccharide glucosyltransferase I activity IMP
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IMP
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015444 P-type magnesium transporter activity ISO
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IBA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015169 glycerol-3-phosphate transmembrane transporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IDA
GO:0015793 glycerol transmembrane transport AnnotationPropagation P GO:0015254 glycerol channel activity IDA
GO:0015074 DNA integration AnnotationPropagation P GO:0009009 site-specific recombinase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0036308 16S rRNA (guanine(1516)-N(2))-methyltransferase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0032067 type IV site-specific deoxyribonuclease activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070038 rRNA (pseudouridine-N3-)-methyltransferase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0032067 type IV site-specific deoxyribonuclease activity IDA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IDA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015662 P-type ion transporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IMP
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0015413 ABC-type nickel transporter activity ISS
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008993 rhamnulokinase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity ISS
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008671 2-dehydro-3-deoxygalactonokinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0004673 protein histidine kinase activity IDA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IMP
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0015804 neutral amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IMP
GO:0015803 branched-chain amino acid transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IMP
GO:0015695 organic cation transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IMP
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015190 L-leucine transmembrane transporter activity IMP
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015453 oxidoreduction-driven active transmembrane transporter activity IDA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0015986 proton motive force-driven ATP synthesis AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity ISS
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity ISS
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0015506 nucleoside:proton symporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity RCA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity RCA
GO:0015821 methionine transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IDA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008821 crossover junction DNA endonuclease activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IDA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IDA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IDA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IMP
GO:0042939 tripeptide transport AnnotationPropagation P GO:0042937 tripeptide transmembrane transporter activity IMP
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015366 malate:proton symporter activity IBA
GO:0071423 malate transmembrane transport AnnotationPropagation P GO:0015366 malate:proton symporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0046943 carboxylic acid transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IMP
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015501 glutamate:sodium symporter activity IBA
GO:0006569 L-tryptophan catabolic process AnnotationPropagation P GO:0009034 tryptophanase activity IDA
GO:0015706 nitrate transmembrane transport AnnotationPropagation P GO:0015112 nitrate transmembrane transporter activity IBA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process AnnotationPropagation P GO:0004797 thymidine kinase activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity ISS
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0009384 N-acylmannosamine kinase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IDA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0033863 ribose 1,5-bisphosphate phosphokinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IMP
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0015413 ABC-type nickel transporter activity ISS
GO:0017148 negative regulation of translation AnnotationPropagation P GO:0030371 translation repressor activity IMP
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015144 carbohydrate transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005247 voltage-gated chloride channel activity IBA
GO:0015699 antimonite transmembrane transport AnnotationPropagation P GO:0042960 antimonite secondary active transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0001217 DNA-binding transcription repressor activity ISS
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015562 efflux transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004536 DNA nuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0001217 DNA-binding transcription repressor activity IGI
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0031167 rRNA methylation AnnotationPropagation P GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008741 ribulokinase activity IMP
GO:0070476 rRNA (guanine-N7)-methylation AnnotationPropagation P GO:0070043 rRNA (guanine-N7-)-methyltransferase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:1903716 guanine transmembrane transport AnnotationPropagation P GO:0015208 guanine transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0052913 16S rRNA (guanine(966)-N(2))-methyltransferase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008821 crossover junction DNA endonuclease activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0009977 proton motive force dependent protein transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0140359 ABC-type transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity EXP
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 AMP kinase activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0015760 glucose-6-phosphate transport AnnotationPropagation P GO:0061513 glucose 6-phosphate:phosphate antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0071424 rRNA (cytosine-N4-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0042910 xenobiotic transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0034775 glutathione transmembrane transport AnnotationPropagation P GO:0034634 glutathione transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0015871 choline transport AnnotationPropagation P GO:0015220 choline transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015399 primary active transmembrane transporter activity ISS
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005452 solute:inorganic anion antiporter activity IDA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005452 solute:inorganic anion antiporter activity IDA
GO:0035873 lactate transmembrane transport AnnotationPropagation P GO:0015129 lactate transmembrane transporter activity EXP
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0033214 siderophore-iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IDA
GO:0042918 alkanesulfonate transmembrane transport AnnotationPropagation P GO:0042959 ABC-type alkanesulfonate transporter transporter activity EXP
GO:0006761 dihydrofolate biosynthetic process AnnotationPropagation P GO:0008841 dihydrofolate synthase activity IBA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002161 aminoacyl-tRNA deacylase activity IDA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0001217 DNA-binding transcription repressor activity IDA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015169 glycerol-3-phosphate transmembrane transporter activity IBA
GO:0106004 tRNA (guanine-N7)-methylation AnnotationPropagation P GO:0008176 tRNA (guanine(46)-N7)-methyltransferase activity IDA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IMP
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IMP
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015736 hexuronate transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0015778 hexuronide transmembrane transport AnnotationPropagation P GO:0015134 hexuronate transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IDA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IDA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IDA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0046836 glycolipid transport AnnotationPropagation P GO:0017089 glycolipid transfer activity IMP
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0017089 glycolipid transfer activity IMP
GO:0033214 siderophore-iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070677 rRNA (cytosine-2'-O-)-methyltransferase activity IBA
GO:0015757 galactose transmembrane transport AnnotationPropagation P GO:0005354 galactose transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0035444 nickel cation transmembrane transport AnnotationPropagation P GO:0015413 ABC-type nickel transporter activity ISS
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IGI
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0045182 translation regulator activity IDA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015453 oxidoreduction-driven active transmembrane transporter activity IDA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0009486 cytochrome bo3 ubiquinol oxidase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IDA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015294 solute:monoatomic cation symporter activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0046836 glycolipid transport AnnotationPropagation P GO:0017089 glycolipid transfer activity IMP
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0017089 glycolipid transfer activity IMP
GO:0017148 negative regulation of translation AnnotationPropagation P GO:0000900 mRNA regulatory element binding translation repressor activity IMP
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IBA
GO:0035600 tRNA methylthiolation AnnotationPropagation P GO:0035597 tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0005337 nucleoside transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IMP
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IMP
GO:0015761 mannose transmembrane transport AnnotationPropagation P GO:0022870 protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity IDA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IMP
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IMP
GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing AnnotationPropagation P GO:1903231 mRNA base-pairing post-transcriptional repressor activity IDA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IGI
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity EXP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 GMP kinase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0019200 carbohydrate kinase activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0034775 glutathione transmembrane transport AnnotationPropagation P GO:0034634 glutathione transmembrane transporter activity IGI
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IDA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IDA
GO:0015707 nitrite transport AnnotationPropagation P GO:0015514 nitrite efflux transmembrane transporter activity EXP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015514 nitrite efflux transmembrane transporter activity EXP
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008744 L-xylulokinase activity IDA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0043858 arginine:ornithine antiporter activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IDA
GO:0019805 quinolinate biosynthetic process AnnotationPropagation P GO:0008987 quinolinate synthetase A activity IMP
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015847 putrescine transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:1903352 L-ornithine transmembrane transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015496 putrescine:ornithine antiporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004096 catalase activity IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0001522 pseudouridine synthesis AnnotationPropagation P GO:0004730 pseudouridylate synthase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008989 rRNA (guanine-N1-)-methyltransferase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IDA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0016463 P-type zinc transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0015769 melibiose transport AnnotationPropagation P GO:0015487 melibiose:monoatomic cation symporter activity IDA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015487 melibiose:monoatomic cation symporter activity IDA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015487 melibiose:monoatomic cation symporter activity IDA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IDA
GO:0015695 organic cation transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IDA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IDA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0009977 proton motive force dependent protein transmembrane transporter activity IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090588 protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008787 D-allose kinase activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0015666 restriction endodeoxyribonuclease activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015847 putrescine transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity EXP
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity EXP
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0015853 adenine transport AnnotationPropagation P GO:0015207 adenine transmembrane transporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0031459 ABC-type glycine betaine transporter activity RCA
GO:0031460 glycine betaine transport AnnotationPropagation P GO:0031459 ABC-type glycine betaine transporter activity RCA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0008137 NADH dehydrogenase (ubiquinone) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090585 protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0042942 D-serine transmembrane transport AnnotationPropagation P GO:0042945 D-serine transmembrane transporter activity ISS
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015453 oxidoreduction-driven active transmembrane transporter activity IDA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IDA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IGI
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0045127 N-acetylglucosamine kinase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0052907 23S rRNA (adenine(1618)-N(6))-methyltransferase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004529 DNA exonuclease activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IDA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IDA
GO:0015811 L-cystine transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015184 L-cystine transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0006835 dicarboxylic acid transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0015558 secondary active p-aminobenzoyl-glutamate transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008673 2-dehydro-3-deoxygluconokinase activity IDA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity RCA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015293 symporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:0017148 negative regulation of translation AnnotationPropagation P GO:0000900 mRNA regulatory element binding translation repressor activity IDA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015430 ABC-type glycerol-3-phosphate transporter activity IDA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015407 ABC-type monosaccharide transporter activity IMP
GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IDA
GO:0009107 lipoate biosynthetic process AnnotationPropagation P GO:0016992 lipoate synthase activity IDA
GO:0000451 rRNA 2'-O-methylation AnnotationPropagation P GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity IMP
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IDA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004536 DNA nuclease activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0015986 proton motive force-driven ATP synthesis AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0051908 double-stranded DNA 5'-3' DNA exonuclease activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0045127 N-acetylglucosamine kinase activity IBA
GO:1904823 purine nucleobase transmembrane transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0042906 xanthine transport AnnotationPropagation P GO:0042907 xanthine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IMP
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004747 ribokinase activity IDA
GO:0006868 glutamine transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IGI
GO:0015695 organic cation transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IGI
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IGI
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0015774 polysaccharide transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015426 ATPase-coupled polar amino acid-transporter activity ISM
GO:0033214 siderophore-iron import into cell AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015344 siderophore uptake transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0009384 N-acylmannosamine kinase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IDA
GO:0009103 lipopolysaccharide biosynthetic process AnnotationPropagation P GO:0047270 lipopolysaccharide glucosyltransferase II activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008855 exodeoxyribonuclease VII activity IMP
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0051920 peroxiredoxin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity ISS
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0031564 transcription antitermination AnnotationPropagation P GO:0001073 transcription antitermination factor activity, DNA binding IDA
GO:0015726 L-idonate transmembrane transport AnnotationPropagation P GO:0015568 L-idonate transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008865 fructokinase activity IDA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0015751 arabinose transmembrane transport AnnotationPropagation P GO:0015147 L-arabinose transmembrane transporter activity IGI
GO:0015765 methylgalactoside transport AnnotationPropagation P GO:0015592 methylgalactoside transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015592 methylgalactoside transmembrane transporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0015794 glycerol-3-phosphate transmembrane transport AnnotationPropagation P GO:0015430 ABC-type glycerol-3-phosphate transporter activity IDA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IDA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0015724 formate transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015499 formate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0098531 ligand-modulated transcription factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IDA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004747 ribokinase activity IBA
GO:0015074 DNA integration AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0075713 establishment of integrated proviral latency AnnotationPropagation P GO:0008979 prophage integrase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004130 cytochrome-c peroxidase activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070677 rRNA (cytosine-2'-O-)-methyltransferase activity IDA
GO:0016020 membrane AnnotationPropagation C GO:0006665 sphingolipid metabolic process IBA
GO:0034220 monoatomic ion transmembrane transport AnnotationPropagation P GO:0008381 mechanosensitive monoatomic ion channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IMP
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IMP
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0015749 monosaccharide transmembrane transport AnnotationPropagation P GO:0015407 ABC-type monosaccharide transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:1904680 peptide transmembrane transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0070677 rRNA (cytosine-2'-O-)-methyltransferase activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0042780 tRNA 3'-end processing AnnotationPropagation P GO:0042781 3'-tRNA processing endoribonuclease activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008821 crossover junction DNA endonuclease activity IDA
GO:0006310 DNA recombination AnnotationPropagation P GO:0000150 DNA strand exchange activity IMP
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015483 long-chain fatty acid transporting porin activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IDA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015333 peptide:proton symporter activity IMP
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IMP
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IDA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004362 glutathione-disulfide reductase (NADPH) activity IDA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0120014 phospholipid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0120014 phospholipid transfer activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IBA
GO:0017148 negative regulation of translation AnnotationPropagation P GO:0000900 mRNA regulatory element binding translation repressor activity IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015847 putrescine transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity IBA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015489 putrescine transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0016989 sigma factor antagonist activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000156 phosphorelay response regulator activity IDA
GO:1902047 polyamine transmembrane transport AnnotationPropagation P GO:0015417 ABC-type polyamine transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IDA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004396 hexokinase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015620 ferric-enterobactin transmembrane transporter activity IBA
GO:0015685 ferric-enterobactin import into cell AnnotationPropagation P GO:0015620 ferric-enterobactin transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0001676 long-chain fatty acid metabolic process AnnotationPropagation P GO:0004467 long-chain fatty acid-CoA ligase activity IMP
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA
GO:0061615 glycolytic process through fructose-6-phosphate AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002161 aminoacyl-tRNA deacylase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015288 porin activity IDA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015295 solute:proton symporter activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0009977 proton motive force dependent protein transmembrane transporter activity IDA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IMP
GO:2000142 regulation of DNA-templated transcription initiation AnnotationPropagation P GO:0016987 sigma factor activity IBA
GO:1904981 maltose transmembrane transport AnnotationPropagation P GO:0015423 ABC-type maltose transporter activity IDA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0043872 lysine:cadaverine antiporter activity IBA
GO:0015835 peptidoglycan transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0015834 peptidoglycan-associated peptide transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015640 peptidoglycan peptide transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008662 1-phosphofructokinase activity IDA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IDA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 GMP kinase activity IDA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 GMP kinase activity IDA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0015986 proton motive force-driven ATP synthesis AnnotationPropagation P GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IMP
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0015774 polysaccharide transport AnnotationPropagation P GO:0015159 polysaccharide transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0006869 lipid transport AnnotationPropagation P GO:0034040 ATPase-coupled lipid transmembrane transporter activity IBA
GO:0015821 methionine transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015191 L-methionine transmembrane transporter activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IDA
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA AnnotationPropagation P GO:0004479 methionyl-tRNA formyltransferase activity IDA
GO:0016020 membrane AnnotationPropagation C GO:0009245 lipid A biosynthetic process IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015649 2-keto-3-deoxygluconate:proton symporter activity IDA
GO:0046411 2-keto-3-deoxygluconate transmembrane transport AnnotationPropagation P GO:0015649 2-keto-3-deoxygluconate:proton symporter activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity ISS
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity ISS
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IDA
GO:0035429 gluconate transmembrane transport AnnotationPropagation P GO:0015128 gluconate transmembrane transporter activity IDA
GO:0042350 GDP-L-fucose biosynthetic process AnnotationPropagation P GO:0050577 GDP-L-fucose synthase activity IDA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IDA
GO:0035873 lactate transmembrane transport AnnotationPropagation P GO:0015129 lactate transmembrane transporter activity EXP
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016436 rRNA (uridine) methyltransferase activity IMP
GO:0006259 DNA metabolic process AnnotationPropagation P GO:1990238 double-stranded DNA endonuclease activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0015862 uridine transmembrane transport AnnotationPropagation P GO:0015213 uridine transmembrane transporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015473 fimbrial usher porin activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IDA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IMP
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:1903791 uracil transmembrane transport AnnotationPropagation P GO:0015505 uracil:monoatomic cation symporter activity IBA
GO:0035442 dipeptide transmembrane transport AnnotationPropagation P GO:0071916 dipeptide transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004602 glutathione peroxidase activity IDA
GO:0046836 glycolipid transport AnnotationPropagation P GO:0017089 glycolipid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0017089 glycolipid transfer activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0090564 protein-phosphocysteine-glucose phosphotransferase system transporter activity IBA

Predictions (experimental)