GORULE violations assigned by sgd
Contents
gorule-0000001
GAF lines are parsed according to GAF 2.2 specifications
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
gorule-0000061
Allowed gene product to term relations (gp2term)
MESSAGES
gorule-0000001
GAF lines are parsed according to GAF 2.2 specifications
messages
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:19095620 IDA F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:1990278 IMP F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:9620854 IDA F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0008033 PMID:1990278 IMP P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0008033 PMID:9620854 IDA P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0034965 PMID:18713869 IDA P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0034965 PMID:18713869 IMP P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 part_of GO:0005655 PMID:19095620 IDA C Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 part_of GO:0005655 PMID:9620854 IDA C Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8247008 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8290578 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8602511 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8247008 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8290578 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8602511 IDA P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006397 PMID:22977255 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0045787 PMID:12136008 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
- WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 part_of GO:0000172 PMID:1398074 IDA C Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
gorule-0000020
Automatic repair of annotations to merged or obsoleted terms
messages
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000001649 TPK3 involved_in GO:0010737 PMID:20133652 IGI SGD:S000003700 P cAMP-dependent protein kinase catalytic subunit TPK3 YKL166C protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000001649 TPK3 involved_in GO:0010737 PMID:20133652 IGI SGD:S000006124 P cAMP-dependent protein kinase catalytic subunit TPK3 YKL166C protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000003700 TPK1 involved_in GO:0010737 PMID:20133652 IGI SGD:S000001649 P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000003700 TPK1 involved_in GO:0010737 PMID:20133652 IGI SGD:S000006124 P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000006124 TPK2 involved_in GO:0010737 PMID:20133652 IGI SGD:S000001649 P cAMP-dependent protein kinase catalytic subunit TPK2 PKA2|PKA3|YKR1|YPL203W protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000006124 TPK2 involved_in GO:0010737 PMID:20133652 IGI SGD:S000003700 P cAMP-dependent protein kinase catalytic subunit TPK2 PKA2|PKA3|YKR1|YPL203W protein taxon:559292 20130807 SGD
`
- ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000277 RDH54 located_in GO:0005634 PMID:16831867 IC GO:0032508 C DNA-dependent ATPase RDH54 TID1|YBR073W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000007339 ATP19 contributes_to GO:0046933 PMID:9857174 IC GO:0000276 F F1F0 ATP synthase subunit k YOL077W-A protein taxon:559292 20141205 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000308 YMC2 enables GO:0005342 PMID:16140254 IGI SGD:S000005748 F organic acid transporter YBR104W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000308 YMC2 enables GO:0005342 PMID:16140254 IGI SGD:S000006055 F organic acid transporter YBR104W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005979 PDR12 enables GO:0005342 PMID:10419965 IDA F ATP-binding cassette multidrug transporter PDR12 YPL058C protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006262 YMC1 enables GO:0005342 PMID:16140254 IGI SGD:S000005748 F organic acid transporter YPR058W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006262 YMC1 enables GO:0005342 PMID:16140254 IGI SGD:S000006055 F organic acid transporter YPR058W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006262 YMC1 enables GO:0005342 PMID:16140254 ISS SGD:S000005748 F organic acid transporter YPR058W protein taxon:559292 20141002 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006262 YMC1 enables GO:0005342 PMID:16140254 ISS SGD:S000006055 F organic acid transporter YPR058W protein taxon:559292 20141002 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003356 ASN2 involved_in GO:0006529 PMID:8951815 IGI SGD:S000006349 P asparagine synthase (glutamine-hydrolyzing) 2 YGR124W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006349 ASN1 involved_in GO:0006529 PMID:8951815 IGI SGD:S000003356 P asparagine synthase (glutamine-hydrolyzing) 1 YPR145W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001092 SMF2 enables GO:0022890 PMID:10574989 IDA F divalent metal ion transporter SMF2 YHR050W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001844 ALR2 enables GO:0022890 PMID:9430719 IMP F putative Mg(2+) transporter ALR2 YFL050C protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004024 SMF3 enables GO:0022890 PMID:10930410 ISS SGD:S000001092 F putative divalent metal ion transporter SMF3 YLR034C protein taxon:559292 20150518 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005338 HOL1 enables GO:0022890 PMID:8955402 IMP F YNR055C protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005482 SMF1 enables GO:0022890 PMID:10574989 IDA F divalent metal ion transporter SMF1 SBS1|YOL122C protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005490 ALR1 enables GO:0022890 PMID:9430719 IMP F Mg(2+) transporter ALR1 SWC3|YOL130W protein taxon:559292 20130807 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000883 SER3 enables GO:0061759 PMID:26774271 IDA F phosphoglycerate dehydrogenase SER3 YER081W protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000883 SER3 enables GO:0061759 PMID:26774271 IGI SGD:S000001336 F phosphoglycerate dehydrogenase SER3 YER081W protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000883 SER3 enables GO:0061759 PMID:26774271 IMP F phosphoglycerate dehydrogenase SER3 YER081W protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001336 SER33 enables GO:0061759 PMID:26774271 IDA F phosphoglycerate dehydrogenase SER33 YIL074C protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001336 SER33 enables GO:0061759 PMID:26774271 IGI SGD:S000000883 F phosphoglycerate dehydrogenase SER33 YIL074C protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001336 SER33 enables GO:0061759 PMID:26774271 IMP F phosphoglycerate dehydrogenase SER33 YIL074C protein taxon:559292 20160311 SGD
`
- WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003630 KHA1 involved_in GO:0098662 PMID:9811642 IMP P YJL094C protein taxon:559292 20201217 SGD
`
gorule-0000061
Allowed gene product to term relations (gp2term)
messages
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000005369 C FUN37|YAL010C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C FUN37|YAL010C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000005369 C FUN37|YAL010C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000213 HHF1 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YBR009C protein taxon:559292 20240320 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000214 HHT1 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 BUR5|SIN2|YBR010W protein taxon:559292 20240517 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IMP C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000000516 C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002583 C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002856 C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000003484 C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000005549 C YCR082W protein taxon:559292 20210915 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000824 SRB4 is_active_in GO:0070847 PMID:9891034 IDA C MED17|YER022W protein taxon:559292 20221020 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000933 RPS26B is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26B YER131W protein taxon:559292 20200824 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001022 ECM29 is_active_in GO:0000502 PMID:12408819 IDA C YHL030W protein taxon:559292 20200804 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001054 VPS29 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit VPS29 PEP11|VPT6|YHR012W protein taxon:559292 20250819 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001098 RSC30 is_active_in GO:0016586 PMID:32188943 IDA C YHR056C protein taxon:559292 20220114 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001117 PPE1 is_active_in GO:0005763 PMID:9151978 IDA C phosphoprotein phosphatase methylesterase 1 YHR075C protein taxon:559292 20221021 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0033203 PMID:9341218 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein taxon:559292 20211015 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0043601 PMID:8257676 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein taxon:559292 20211015 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:10684247 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein taxon:559292 20210315 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:8195299 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein taxon:559292 20210315 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001845 SWP82 is_active_in GO:0016514 PMID:16204215 IDA C YFL049W protein taxon:559292 20220113 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001917 ATG18 is_active_in GO:0170071 PMID:35466426 IDA C phosphoinositide binding protein ATG18 AUT10|CVT18|NMR1|SVP1|YFR021W protein taxon:559292 20250819 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002200 SIR2 is_active_in GO:0005677 PMID:9122169 IDA C NAD-dependent histone deacetylase SIR2 MAR1|YDL042C protein taxon:559292 20220112 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002241 RPS16B is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16B YDL083C protein taxon:559292 20220523 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002268 TMA17 is_active_in GO:0005835 PMID:32160528 IDA C ADC17|YDL110C protein taxon:559292 20200319 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002367 NHP2 is_active_in GO:0031429 PMID:9843512 IPI UniProtKB:P28007 C snoRNA-binding protein NHP2 YDL208W protein taxon:559292 20220721 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002469 LCB2 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB2 SCS1|TSC1|YDR062W protein taxon:559292 20250502 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IDA C DNA polymerase epsilon noncatalytic subunit YDR121W protein taxon:559292 20230221 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IPI SGD:S000005831 C DNA polymerase epsilon noncatalytic subunit YDR121W protein taxon:559292 20230221 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002547 MTQ2 is_active_in GO:0015934 PMID:33166396 IDA C S-adenosylmethionine-dependent methyltransferase YDR140W protein taxon:559292 20210204 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein YmL35 YDR322W|mL38 protein taxon:559292 20210521 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:9151978 IDA C mitochondrial 54S ribosomal protein YmL35 YDR322W|mL38 protein taxon:559292 20210521 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002904 PUF6 is_active_in GO:0030687 PMID:27458021 IDA C YDR496C protein taxon:559292 20230126 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002999 RPL24A is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24A RPL30A|YGL031C protein taxon:559292 20220706 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003043 MPS2 is_active_in GO:0034993 PMID:32967926 IDA C MMC1|YGL075C protein taxon:559292 20210311 SGD part_of(GO:0000781)
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003157 RPS26A is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26A RPS26|YGL189C protein taxon:559292 20210412 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003194 OST5 is_active_in GO:0008250 PMID:12805367 IDA C dolichyl-diphosphooligosaccharide--protein glycotransferase subunit YGL226C-A protein taxon:559292 20220121 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15640796 IDA C YGR113W protein taxon:559292 20220620 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15664196 IDA C YGR113W protein taxon:559292 20220620 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003380 RPL24B is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24B RPL30B|YGR148C protein taxon:559292 20220706 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003589 PEP8 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit PEP8 GRD6|VPS26|VPT4|YJL053W protein taxon:559292 20250819 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003690 VPS35 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit VPS35 ENV1|GRD9|VPT7|YJL154C protein taxon:559292 20250819 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003848 EMC2 is_active_in GO:0072546 PMID:19325107 IDA C YJR088C protein taxon:559292 20220721 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003937 EMC6 is_active_in GO:0072546 PMID:19325107 IDA C YLL014W protein taxon:559292 20220721 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:18782943 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein taxon:559292 20220826 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:385049 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein taxon:559292 20220826 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004194 QRI5 is_active_in GO:0005763 PMID:28154081 IDA C mitochondrial 37S ribosomal protein QRI5 COX24|YLR204W|mS38 protein taxon:559292 20220620 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004313 SFH1 is_active_in GO:0016586 PMID:31672915 IDA C YLR321C protein taxon:559292 20220113 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004434 SIR3 is_active_in GO:0005677 PMID:9122169 IDA C chromatin-silencing protein SIR3 CMT1|MAR2|STE8|YLR442C protein taxon:559292 20211122 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004751 RPS16A is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16A YMR143W protein taxon:559292 20220523 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004911 LCB1 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB1 END8|TSC2|YMR296C protein taxon:559292 20250502 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004950 MRP7 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein YmL2 YNL005C|bL27m protein taxon:559292 20210521 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004975 HHF2 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YNL030W protein taxon:559292 20240320 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004976 HHT2 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 YNL031C protein taxon:559292 20240517 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005474 PTH4 is_active_in GO:0005762 PMID:25683707 IDA C YOL114C protein taxon:559292 20221118 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005705 SYC1 is_active_in GO:0005847 PMID:12819204 IDA C cleavage polyadenylation factor subunit SYC1 YOR179C protein taxon:559292 20210824 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005896 RPS12 is_active_in GO:0022627 PMID:3533916 IDA C 40S ribosomal protein eS12 RPS12 YOR369C protein taxon:559292 20220826 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005941 ULP1 is_active_in GO:0005643 PMID:12471376 IDA C SUMO protease ULP1 NIB1|YPL020C protein taxon:559292 20250508 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006131 SRP72 is_active_in GO:0005786 PMID:7925282 IDA C signal recognition particle subunit SRP72 YPL210C protein taxon:559292 20210819 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006337 SPN1 is_active_in GO:0005665 PMID:32941642 IMP C transcription factor SPN1 IWS1|YPR133C protein taxon:559292 20230127 SGD
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000028510 SUS1 is_active_in GO:0000124 PMID:14718168 IDA C YBR111W-A protein taxon:559292 20211122 SGD
`