GORULE violations assigned by sgd


Contents

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000013 Taxon-appropriate annotation check

gorule-0000017 IDA annotations must not have a With/From entry

gorule-0000018 IPI annotations require a With/From entry

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000027 Each identifier in GAF is valid

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

gorule-0000063 Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)



MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

messages

gorule-0000013

Taxon-appropriate annotation check

messages

gorule-0000017

IDA annotations must not have a With/From entry

messages

gorule-0000018

IPI annotations require a With/From entry

messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

messages

gorule-0000027

Each identifier in GAF is valid

messages

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

messages

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

messages