GORULE violations assigned by sgd

Contents

gorule-0000001 GAF lines are parsed according to GAF 2.2 specifications

gorule-0000013 Taxon-appropriate annotation check

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000061 Allowed gene product to term relations (gp2term)

MESSAGES

gorule-0000001

GAF lines are parsed according to GAF 2.2 specifications

• total: 18

messages

• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:19095620 IDA F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:1990278 IMP F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 contributes_to GO:0004526 PMID:9620854 IDA F Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0008033 PMID:1990278 IMP P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0008033 PMID:9620854 IDA P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0034965 PMID:18713869 IDA P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 involved_in GO:0034965 PMID:18713869 IMP P Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 part_of GO:0005655 PMID:19095620 IDA C Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000006490 URS0000413C32_559292 part_of GO:0005655 PMID:9620854 IDA C Saccharomyces cerevisiae S288C RNase P Ribonucleoprotein enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8247008 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8290578 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 contributes_to GO:0000171 PMID:8602511 IMP F Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8247008 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8290578 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006364 PMID:8602511 IDA P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0006397 PMID:22977255 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 involved_in GO:0045787 PMID:12136008 IMP P Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `
• WARNING - Invalid subject type:defaulting to 'gene_product'--`SGD S000007436 URS000006F31F_559292 part_of GO:0000172 PMID:1398074 IDA C Saccharomyces cerevisiae S288C Nuclear Mitochondrial processing Endoribonuclease enzymatic_RNA taxon:559292 20150625 SGD `

gorule-0000013

Taxon-appropriate annotation check

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004589 NDI1 enables GO:0008137 PMID:3138118 IDA F NADH-ubiquinone reductase (H(+)-translocating) NDI1 YML120C protein taxon:559292 20130807 SGD `

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 23

messages

• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000277 RDH54 located_in GO:0005634 PMID:16831867 IC GO:0032508 C DNA-dependent ATPase RDH54 TID1|YBR073W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000007339 ATP19 contributes_to GO:0046933 PMID:9857174 IC GO:0000276 F F1F0 ATP synthase subunit k YOL077W-A protein taxon:559292 20141205 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000178 ALG3 involved_in GO:0006486 PMID:8842708 IMP P dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichol alpha-1,3-mannosyltransferase RHK1|YBL082C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000206 RER2 involved_in GO:0006486 PMID:9858571 IDA P ditrans,polycis-polyprenyl diphosphate synthase YBR002C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000206 RER2 involved_in GO:0006486 PMID:9858571 IMP P ditrans,polycis-polyprenyl diphosphate synthase YBR002C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000219 MNN2 involved_in GO:0006486 PMID:9756928 IMP P alpha-1,2-mannosyltransferase MNN2 CRV4|LDB8|TTP1|YBR015C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000768 GDA1 involved_in GO:0006486 PMID:8391537 IMP P guanosine diphosphatase YEL042W protein taxon:559292 20181113 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000805 PMI40 involved_in GO:0006486 PMID:1377774 IMP P mannose-6-phosphate isomerase PMI40 YER003C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000807 YND1 involved_in GO:0006486 PMID:10409709 IMP P apyrase APY1|YEJ5|YER005W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000002213 PSA1 involved_in GO:0006486 PMID:9195935 IMP P mannose-1-phosphate guanylyltransferase MPG1|SRB1|VIG9|YDL055C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000002352 NUS1 involved_in GO:0006486 PMID:16943325 IMP P ditrans,polycis-polyprenyl diphosphate synthase YDL193W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000002822 ERD1 acts_upstream_of_or_within GO:0006486 PMID:34821548 IMP P LDB2|YDR414C protein taxon:559292 20211202 SGD occurs_in(GO:0000139) `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003719 MNN11 involved_in GO:0006486 PMID:10635561 IDA P alpha-1,6-mannosyltransferase YJL183W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003719 MNN11 involved_in GO:0006486 PMID:10635561 IMP P alpha-1,6-mannosyltransferase YJL183W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003722 MNN5 involved_in GO:0006486 PMID:9756928 IMP P alpha-1,2-mannosyltransferase MNN5 YJL186W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004707 SRT1 involved_in GO:0006486 PMID:11442630 IDA P ditrans,polycis-polyprenyl diphosphate synthase YMR101C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004707 SRT1 involved_in GO:0006486 PMID:11442630 IMP P ditrans,polycis-polyprenyl diphosphate synthase YMR101C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004993 ALG11 involved_in GO:0006486 PMID:11278778 IMP P alpha-1,2-mannosyltransferase ALG11 YNL048W protein taxon:559292 20190410 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005163 ALG9 involved_in GO:0006486 PMID:8692962 IMP P dolichyl-P-Man:Man(6)GlcNAc(2)-PP-dolichol alpha-1,2-mannosyltransferase YNL219C protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005313 ALG12 involved_in GO:0006486 PMID:10336995 IMP P dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase ECM39|YNR030W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005313 ALG12 involved_in GO:0006486 PMID:12460938 IMP P dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase ECM39|YNR030W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005528 ALG6 involved_in GO:0006486 PMID:8877369 IMP P dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase YOR002W protein taxon:559292 20130807 SGD `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005611 OST3 involved_in GO:0006486 PMID:7622558 IMP P dolichyl-diphosphooligosaccharide--protein glycotransferase OST3 YOR085W protein taxon:559292 20130807 SGD `

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 61

messages

• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000005369 C FUN37|YAL010C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C FUN37|YAL010C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000005369 C FUN37|YAL010C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000213 HHF1 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YBR009C protein taxon:559292 20240320 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000214 HHT1 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 BUR5|SIN2|YBR010W protein taxon:559292 20240517 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IMP C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000000516 C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002583 C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002856 C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000003484 C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000005549 C YCR082W protein taxon:559292 20210915 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000824 SRB4 is_active_in GO:0070847 PMID:9891034 IDA C MED17|YER022W protein taxon:559292 20221020 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000933 RPS26B is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26B YER131W protein taxon:559292 20200824 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001022 ECM29 is_active_in GO:0000502 PMID:12408819 IDA C YHL030W protein taxon:559292 20200804 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001098 RSC30 is_active_in GO:0016586 PMID:32188943 IDA C YHR056C protein taxon:559292 20220114 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001117 PPE1 is_active_in GO:0005763 PMID:9151978 IDA C phosphoprotein phosphatase methylesterase 1 YHR075C protein taxon:559292 20221021 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0033203 PMID:9341218 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein taxon:559292 20211015 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0043601 PMID:8257676 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein taxon:559292 20211015 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:10684247 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein taxon:559292 20210315 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:8195299 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein taxon:559292 20210315 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001845 SWP82 is_active_in GO:0016514 PMID:16204215 IDA C YFL049W protein taxon:559292 20220113 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002200 SIR2 is_active_in GO:0005677 PMID:9122169 IDA C NAD-dependent histone deacetylase SIR2 MAR1|YDL042C protein taxon:559292 20220112 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002241 RPS16B is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16B YDL083C protein taxon:559292 20220523 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002268 TMA17 is_active_in GO:0005835 PMID:32160528 IDA C ADC17|YDL110C protein taxon:559292 20200319 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002367 NHP2 is_active_in GO:0031429 PMID:9843512 IPI UniProtKB:P28007 C snoRNA-binding protein NHP2 YDL208W protein taxon:559292 20220721 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002469 LCB2 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB2 SCS1|TSC1|YDR062W protein taxon:559292 20250502 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IDA C DNA polymerase epsilon noncatalytic subunit YDR121W protein taxon:559292 20230221 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IPI SGD:S000005831 C DNA polymerase epsilon noncatalytic subunit YDR121W protein taxon:559292 20230221 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002547 MTQ2 is_active_in GO:0015934 PMID:33166396 IDA C S-adenosylmethionine-dependent methyltransferase YDR140W protein taxon:559292 20210204 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein YmL35 YDR322W|mL38 protein taxon:559292 20210521 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:9151978 IDA C mitochondrial 54S ribosomal protein YmL35 YDR322W|mL38 protein taxon:559292 20210521 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002904 PUF6 is_active_in GO:0030687 PMID:27458021 IDA C YDR496C protein taxon:559292 20230126 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002999 RPL24A is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24A RPL30A|YGL031C protein taxon:559292 20220706 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003043 MPS2 is_active_in GO:0034993 PMID:32967926 IDA C MMC1|YGL075C protein taxon:559292 20210311 SGD part_of(GO:0000781) `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003157 RPS26A is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26A RPS26|YGL189C protein taxon:559292 20210412 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003194 OST5 is_active_in GO:0008250 PMID:12805367 IDA C dolichyl-diphosphooligosaccharide--protein glycotransferase subunit YGL226C-A protein taxon:559292 20220121 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15640796 IDA C YGR113W protein taxon:559292 20220620 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15664196 IDA C YGR113W protein taxon:559292 20220620 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003380 RPL24B is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24B RPL30B|YGR148C protein taxon:559292 20220706 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003848 EMC2 is_active_in GO:0072546 PMID:19325107 IDA C YJR088C protein taxon:559292 20220721 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003937 EMC6 is_active_in GO:0072546 PMID:19325107 IDA C YLL014W protein taxon:559292 20220721 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:18782943 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein taxon:559292 20220826 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:385049 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein taxon:559292 20220826 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004194 QRI5 is_active_in GO:0005763 PMID:28154081 IDA C mitochondrial 37S ribosomal protein QRI5 COX24|YLR204W|mS38 protein taxon:559292 20220620 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004313 SFH1 is_active_in GO:0016586 PMID:31672915 IDA C YLR321C protein taxon:559292 20220113 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004434 SIR3 is_active_in GO:0005677 PMID:9122169 IDA C chromatin-silencing protein SIR3 CMT1|MAR2|STE8|YLR442C protein taxon:559292 20211122 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004751 RPS16A is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16A YMR143W protein taxon:559292 20220523 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004911 LCB1 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB1 END8|TSC2|YMR296C protein taxon:559292 20250502 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004950 MRP7 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein YmL2 YNL005C|bL27m protein taxon:559292 20210521 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004975 HHF2 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YNL030W protein taxon:559292 20240320 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004976 HHT2 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 YNL031C protein taxon:559292 20240517 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C ERMES complex subunit MDM12 YOL009C protein taxon:559292 20220513 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005474 PTH4 is_active_in GO:0005762 PMID:25683707 IDA C YOL114C protein taxon:559292 20221118 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005705 SYC1 is_active_in GO:0005847 PMID:12819204 IDA C cleavage polyadenylation factor subunit SYC1 YOR179C protein taxon:559292 20210824 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005896 RPS12 is_active_in GO:0022627 PMID:3533916 IDA C 40S ribosomal protein eS12 RPS12 YOR369C protein taxon:559292 20220826 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005941 ULP1 is_active_in GO:0005643 PMID:12471376 IDA C SUMO protease ULP1 NIB1|YPL020C protein taxon:559292 20250508 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006131 SRP72 is_active_in GO:0005786 PMID:7925282 IDA C signal recognition particle subunit SRP72 YPL210C protein taxon:559292 20210819 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006337 SPN1 is_active_in GO:0005665 PMID:32941642 IMP C transcription factor SPN1 IWS1|YPR133C protein taxon:559292 20230127 SGD `
• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000028510 SUS1 is_active_in GO:0000124 PMID:14718168 IDA C YBR111W-A protein taxon:559292 20211122 SGD `