GORULE violations assigned by HGNC
Contents
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
gorule-0000061
Allowed gene product to term relations (gp2term)
MESSAGES
gorule-0000046
The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.
messages
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 1310999 Cadm1 enables GO:0042803 GO_REF:0000024|RGD:1600115 ISS UniProtKB:Q8R5M8 F cell adhesion molecule 1 gene taxon:10116 20070912 HGNC
`
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB O02703 BAX enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q07812 F Apoptosis regulator BAX BAX protein taxon:9913 20090115 HGNC UniProtKB:O02703
`
- WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q8HYU5 BAX enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q07812 F Bcl-2 Bcl-2 homology region 1-3 domain-containing protein BAX protein taxon:9615 20090115 HGNC UniProtKB:Q8HYU5
`
gorule-0000061
Allowed gene product to term relations (gp2term)
messages
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0002432, RO:0001025. Repaired to RO:0001025--`RGD 1560024 H1f7 part_of GO:0000785 GO_REF:0000024|RGD:1600115 ISS UniProtKB:Q8CJI4 C H1.7 linker histone gene taxon:10116 20090721 HGNC
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025--`UniProtKB Q75WM6 H1-7 part_of GO:0000785 PMID:15710904 ISS UniProtKB:Q8CJI4 C Testis-specific H1 histone H1-7|H1FNT|HANP1 protein taxon:9606 20090721 HGNC UniProtKB:Q75WM6
`
- WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025--`UniProtKB Q8TEV9 SMCR8 part_of GO:0000785 PMID:28195531 IDA C Guanine nucleotide exchange protein SMCR8 SMCR8 protein taxon:9606 20170217 HGNC coincident_with(ENSEMBL:ENSG00000177169) UniProtKB:Q8TEV9
`