GORULE violations assigned by HGNC

Contents

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000027 Each identifier in GAF is valid

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P27544 CERS1 located_in GO:0043231 GO_REF:0000024 ISS UniProtKB:P27545 C Ceramide synthase 1 CERS1|LAG1|LASS1|UOG1 protein taxon:9606 20120828 HGNC UniProtKB:P27544 `

gorule-0000027

Each identifier in GAF is valid

• total: 1

messages

• WARNING - Invalid identifier:GORULE:0000027: ZDB-PUB-110105-1 does not match any id_syntax patterns for ZFIN in dbxrefs--`ZFIN ZDB-GENE-030131-2172 metap2b enables GO:0008235 ZFIN:ZDB-PUB-110105-1 ISS UniProtKB:P50579 F methionyl aminopeptidase 2b metap2|wu:fb98h06|zgc:66250 protein_coding_gene taxon:7955 20080821 HGNC `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 3

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 1310999 Cadm1 enables GO:0042803 GO_REF:0000024|RGD:1600115 ISS UniProtKB:Q8R5M8 F cell adhesion molecule 1 gene taxon:10116 20070912 HGNC `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB O02703 BAX enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q07812 F Apoptosis regulator BAX BAX protein taxon:9913 20090115 HGNC UniProtKB:O02703 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q8HYU5 BAX enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q07812 F Bcl-2 Bcl-2 homology region 1-3 domain-containing protein BAX protein taxon:9615 20090115 HGNC UniProtKB:Q8HYU5 `