GORULE violations assigned by GOC

Contents

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000026 IBA annotations must have been sourced from the PAINT inference pipeline

gorule-0000027 Each identifier in GAF is valid

MESSAGES

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 11

messages

• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`dictyBase DDB_G0287327 prmt5 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P Protein arginine N-methyltransferase 5 DDB_G0287327|prmt5 protein taxon:44689 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`MGI MGI:1351645 Prmt5 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P protein arginine N-methyltransferase 5 Jak-binding protein 1|Jbp1|Skb1 protein taxon:10090 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`ZFIN ZDB-GENE-030616-585 prmt5 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P protein arginine methyltransferase 5 PRMT5|si:zc14a17.2|skb1|wu:fb95f10|zgc:110669 protein taxon:7955 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000337 HSL7 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P protein arginine N-methyltransferase YBR133C protein taxon:559292 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`FB FBgn0015925 csul involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P capsuleen CG3730 protein taxon:7227 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00016408 prmt-5 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P Protein arginine N-methyltransferase 5 C34E10.5|prmt-5|tag-251 protein taxon:6239 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB A7YW45 PRMT5 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P Protein arginine N-methyltransferase 5 PRMT5|SKB1 protein taxon:9913 20250624 GOC UniProtKB:A7YW45 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`JaponicusDB SJAG_00596 skb1 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P type II protein arginine N-methyltransferase Skb1 protein taxon:4897 20250430 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`AGI_LocusCode AT4G31120 PMRT15 involved_in GO:0006338 GO_REF:0000108 IEA GO:0008469 P Protein arginine N-methyltransferase 1.5 At4g31120|F6E21.40|PMRT15|PMRT5|SKB1 protein taxon:3702 20250624 GOC `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`FB FBgn0032049 Bace involved_in GO:0042987 GO_REF:0000108 IEA GO:1902944 P beta-site APP-cleaving enzyme CG13095 protein taxon:7227 20250624 GOC `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`JaponicusDB SJAG_01082 bub1 involved_in GO:0006338 GO_REF:0000108 IEA GO:0072371 P mitotic spindle checkpoint kinase Bub1 protein taxon:4897 20250430 GOC `

gorule-0000026

IBA annotations must have been sourced from the PAINT inference pipeline

• total: 52

messages

• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC1093.02 pdx3 involved_in GO:0042823 GO_REF:0000033 IBA PANTHER:PTN000852062,SGD:S000000239 P pyridoxamine 5'-phosphate oxidase Pdx3 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC11E3.07 vma4 involved_in GO:1902600 GO_REF:0000033 IBA MGI:MGI:1922165,MGI:MGI:894326,PANTHER:PTN005238491 P V-type ATPase V1 subunit E protein taxon:4896 20210602 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC11H11.04 mam2 involved_in GO:0007186 GO_REF:0000033 IBA CGD:CAL0000176630,PANTHER:PTN001997318,PomBase:SPAC11H11.04,SGD:S000001868 P pheromone p-factor receptor Mam2 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC13G7.12c eki1 involved_in GO:0006657 GO_REF:0000033 IBA MGI:MGI:107760,MGI:MGI:1328313,PANTHER:PTN002732015,RGD:61826,RGD:61944,SGD:S000002554,SGD:S000004123,UniProtKB:P35790,UniProtKB:Q8IM71,UniProtKB:Q9Y259,WB:WBGene00000509,WB:WBGene00000510,WB:WBGene00000512,WB:WBGene00000514 P choline/ethanolamine kinase Eki1 protein taxon:4896 20230111 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC16.04 dus3 involved_in GO:0002943 GO_REF:0000033 IBA PANTHER:PTN002911996,SGD:S000004393,UniProtKB:Q96G46 P tRNA/mRNA dihydrouridine synthase Dus3 protein taxon:4896 20241121 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC1635.01 por1 involved_in GO:0098656 GO_REF:0000033 IBA FB:FBgn0004363,MGI:MGI:106919,PANTHER:PTN000201897,RGD:621575,SGD:S000005000,TAIR:locus:2100252,TAIR:locus:2147820,TAIR:locus:2158606,TAIR:locus:2174517,UniProtKB:P21796,UniProtKB:P42057,UniProtKB:P45880,UniProtKB:Q586M2 P mitochondrial outer membrane voltage-dependent anion-selective channel Por1 protein taxon:4896 20240729 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC19B12.05c fcp1 involved_in GO:0006357 GO_REF:0000033 IBA PANTHER:PTN000555199,PomBase:SPAC19B12.05c,TAIR:locus:2091221,UniProtKB:Q9Y5B0,WB:WBGene00009479 P RNA polymerase II CTD phosphatase Fcp1 protein taxon:4896 20200809 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC1B3.15c SPAC1B3.15c involved_in GO:1902600 GO_REF:0000033 IBA PANTHER:PTN000185192,PomBase:SPAC1B3.16c P transmembrane transporter protein taxon:4896 20181004 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC23C11.09 ala1 involved_in GO:0106074 GO_REF:0000033 IBA MGI:MGI:2384560,PANTHER:PTN000206950,UniProtKB:P00957,UniProtKB:P49588,UniProtKB:Q57984 P mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 ars1 protein taxon:4896 20190105 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC24H6.13 SPAC24H6.13 involved_in GO:0098655 GO_REF:0000033 IBA MGI:MGI:2387609,PANTHER:PTN001404773,SGD:S000004231,TAIR:locus:2120673,TAIR:locus:2134882,UniProtKB:Q5T3F8,UniProtKB:Q9P1W3 P plasma membrane calcium permeable gated cation channel protein taxon:4896 20250412 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC2G11.09 SPAC2G11.09 involved_in GO:0098655 GO_REF:0000033 IBA MGI:MGI:2387609,PANTHER:PTN001404773,SGD:S000004231,TAIR:locus:2120673,TAIR:locus:2134882,UniProtKB:Q5T3F8,UniProtKB:Q9P1W3 P plasma membrane calcium permeable gated cation channel protein taxon:4896 20250412 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC30D11.06c hfl1 involved_in GO:0055085 GO_REF:0000033 IBA MGI:MGI:2146634,PANTHER:PTN000603211 P organic solute transmembrane transporter protein taxon:4896 20240507 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC328.09 odc1 involved_in GO:0070778 GO_REF:0000033 IBA PANTHER:PTN000640306,SGD:S000006225 P mitochondrial carrier, 2-oxoadipate/2-oxoglutarate protein taxon:4896 20220925 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC3F10.10c map3 involved_in GO:0007186 GO_REF:0000033 IBA PANTHER:PTN001999186,PomBase:SPAC3F10.10c,SGD:S000001661 P pheromone M-factor receptor Map3 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC4G9.10 arg3 involved_in GO:0006591 GO_REF:0000033 IBA PANTHER:PTN000150424,PomBase:SPAC4G9.10,RGD:3236,SGD:S000003624,UniProtKB:P00480,UniProtKB:P04391,UniProtKB:P06960,UniProtKB:P08308,UniProtKB:P9WIT9,UniProtKB:Q9YHY9 P ornithine carbamoyltransferase Arg3 protein taxon:4896 20220925 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC869.03c SPAC869.03c involved_in GO:0071918 GO_REF:0000033 IBA PANTHER:PTN000929729,SGD:S000001008,TAIR:locus:2163528,UniProtKB:Q5BGB2,UniProtKB:Q7XBS0 P plasma membrane urea transmembrane transporter protein taxon:4896 20220925 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC8C9.05 dtd1 involved_in GO:0106074 GO_REF:0000033 IBA MGI:MGI:1923485,PANTHER:PTN000049487,SGD:S000002378,UniProtKB:P0A6M4 P D-Tyr-tRNA deacylase Dtd1 protein taxon:4896 20220413 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAC8E11.04c pah1 involved_in GO:0098734 GO_REF:0000033 IBA MGI:MGI:1344588,MGI:MGI:1347000,PANTHER:PTN000069163,SGD:S000004108,UniProtKB:O75608,UniProtKB:O95372,UniProtKB:Q5VWZ2 P palmitoyl-(protein) hydrolase Pah1 protein taxon:4896 20250331 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPACUNK4.07c cta4 involved_in GO:0098655 GO_REF:0000033 IBA PANTHER:PTN001944130,PomBase:SPAC29A4.19c,TAIR:locus:2171686 P P-type ATPase family V, transmembrane protein dislocase Cta4 SPAPYUK71.01|sev4 protein taxon:4896 20231109 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPAPB2B4.05 vma5 involved_in GO:1902600 GO_REF:0000033 IBA MGI:MGI:1913585,MGI:MGI:1916025,PANTHER:PTN000015490 P V-type ATPase V1 subunit C protein taxon:4896 20210529 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1198.05 guk1 involved_in GO:0046710 GO_REF:0000033 IBA MGI:MGI:95871,PANTHER:PTN000563396,RGD:1309638,SGD:S000002862,TAIR:locus:2054356,UniProtKB:P46195,UniProtKB:P60546,UniProtKB:P9WKE9,UniProtKB:Q16774,UniProtKB:Q8I2M1 P guanylate kinase Guk1 protein taxon:4896 20230111 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1198.05 guk1 involved_in GO:0046037 GO_REF:0000033 IBA MGI:MGI:95871,PANTHER:PTN000563396,RGD:1309638,SGD:S000002862,TAIR:locus:2054356,UniProtKB:P46195,UniProtKB:P60546,UniProtKB:P9WKE9,UniProtKB:Q16774,UniProtKB:Q8I2M1 P guanylate kinase Guk1 protein taxon:4896 20230111 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1289.05c vma10 involved_in GO:1902600 GO_REF:0000033 IBA MGI:MGI:1913487,MGI:MGI:1913540,MGI:MGI:2450548,PANTHER:PTN000295490 P V-type ATPase V1 domain subunit G protein taxon:4896 20230704 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1347.13c mrm1 involved_in GO:0031167 GO_REF:0000033 IBA PANTHER:PTN000247236,SGD:S000005727,UniProtKB:Q6IN84 P mitochondrial rRNA ribose methyltransferase Mrm1 protein taxon:4896 20220323 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1683.08 ght4 involved_in GO:0034219 GO_REF:0000033 IBA PANTHER:PTN000627328,PomBase:SPCC548.07c,SGD:S000003521,UniProtKB:Q5ASJ3,UniProtKB:Q5AYG1 P plasma membrane hexose:proton symporter, unknown specificity Ght4 protein taxon:4896 20220926 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1683.08 ght4 involved_in GO:1902600 GO_REF:0000033 IBA PANTHER:PTN000627328,PomBase:SPCC548.07c,SGD:S000003521,UniProtKB:Q5ASJ3,UniProtKB:Q5AYG1 P plasma membrane hexose:proton symporter, unknown specificity Ght4 protein taxon:4896 20220926 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1683.10c pcl1 involved_in GO:0071421 GO_REF:0000033 IBA PANTHER:PTN001275041,SGD:S000004210,TAIR:locus:2137375,TAIR:locus:2169804 P vacuolar ferrous iron/manganese transmembrane transporter Pcl1 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC16H5.11c skb1 involved_in GO:0006338 GO_REF:0000033 IBA PANTHER:PTN000077429,WB:WBGene00016408 P type II protein arginine N-methyltransferase Skb1 rmt5 protein taxon:4896 20230602 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1773.15 dal52 involved_in GO:0055085 GO_REF:0000033 IBA PANTHER:PTN000185014,PomBase:SPAC1B3.16c,PomBase:SPBC2G2.01c,SGD:S000000623,SGD:S000001428,SGD:S000003297,SGD:S000003492,SGD:S000003913,SGD:S000003978 P dipeptide transmembrane transporter Dal5h2 dal5h2 protein taxon:4896 20240801 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC1861.05 SPBC1861.05 involved_in GO:0001522 GO_REF:0000033 IBA PANTHER:PTN008090861,TAIR:locus:2008081,UniProtKB:P33025 P bifunctional pseudouridylate synthase/pseudouridine kinase protein taxon:4896 20230720 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC21.05c ral2 involved_in GO:0098869 GO_REF:0000033 IBA CGD:CAL0000196398,FB:FBgn0031479,FB:FBgn0033518,FB:FBgn0033520,MGI:MGI:894320,PANTHER:PTN000073790,RGD:71005,SGD:S000000160,UniProtKB:P30041,UniProtKB:Q8IAM2 P Ras1-Scd pathway protein Ral2 protein taxon:4896 20240801 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC25H2.04c tim22 involved_in GO:0071806 GO_REF:0000033 IBA PANTHER:PTN000364156,SGD:S000002376 P TIM22 inner membrane protein insertion complex subunit Tim22 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC30D10.21 mzm1 involved_in GO:0006457 GO_REF:0000033 IBA PANTHER:PTN005318945,SGD:S000002901 P mitochondrial respiratory chain complex III assembly protein, LYR family Mzm1 new18 protein taxon:4896 20220325 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC32H8.03 bem46 involved_in GO:0098734 GO_REF:0000033 IBA MGI:MGI:1916154,PANTHER:PTN000263918,TAIR:locus:2149877 P palmitoyl-(protein) hydrolase protein taxon:4896 20211111 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC36B7.04 dus1 involved_in GO:0002943 GO_REF:0000033 IBA PANTHER:PTN000118866,PomBase:SPBC36B7.04,PomBase:SPCC777.15,SGD:S000004397,SGD:S000004545,UniProtKB:Q6P1R4 P tRNA/mRNA dihydrouridine synthase Dus1 protein taxon:4896 20241120 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC4F6.09 str1 involved_in GO:0055085 GO_REF:0000033 IBA PANTHER:PTN001160847,UniProtKB:Q8X1Z7 P plasma membrane siderophore-iron transmembrane transporter Str1 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBC947.09 hsp3103 involved_in GO:0019249 GO_REF:0000033 IBA CGD:CAL0000194072,PANTHER:PTN000744377,PomBase:SPAC5H10.02c,PomBase:SPCC757.03c,SGD:S000002941,SGD:S000004941,UniProtKB:P31658 P ThiJ domain protein, glyoxylase III protein taxon:4896 20220309 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPBPB8B6.02c SPBPB8B6.02c involved_in GO:1903711 GO_REF:0000033 IBA CGD:CAL0000194064,PANTHER:PTN002274065,SGD:S000001008 P plasma membrane urea transmembrane transporter protein taxon:4896 20180420 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC1223.04c set11 involved_in GO:0006338 GO_REF:0000033 IBA MGI:MGI:1289184,MGI:MGI:2136890,PANTHER:PTN000998391 P ribosomal protein lysine methyltransferase Set11 mug76 protein taxon:4896 20221007 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC18.02 SPCC18.02 involved_in GO:0055085 GO_REF:0000033 IBA FB:FBgn0260964,MGI:MGI:106684,PANTHER:PTN001519357,RGD:3693,RGD:3694,RGD:62072,UniProtKB:P54219,UniProtKB:Q05940,UniProtKB:Q16572,UniProtKB:Q27963,UniProtKB:Q6NT16,WB:WBGene00000295,WB:WBGene00006756 P transmembrane transporter protein taxon:4896 20230406 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC1827.02c pcy1 involved_in GO:0006657 GO_REF:0000033 IBA FB:FBgn0035231,FB:FBgn0041342,MGI:MGI:2147987,MGI:MGI:88557,PANTHER:PTN000077494,RGD:70515,SGD:S000003434,TAIR:locus:2062591,TAIR:locus:2129705,UniProtKB:P49585,UniProtKB:Q8IEE9,UniProtKB:Q9Y5K3,WB:WBGene00017241 P choline-phosphate cytidylyltransferase Pcy1 pct1 protein taxon:4896 20230109 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC24B10.22 pog1 involved_in GO:0071897 GO_REF:0000033 IBA FB:FBgn0004406,PANTHER:PTN000030201,RGD:620057,SGD:S000005857,UniProtKB:P54098,UniProtKB:Q92076 P mitochondrial DNA polymerase, gamma subunit Pog1 SPCPB16A4.01 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC576.04 bxi1 involved_in GO:0070588 GO_REF:0000033 IBA FB:FBgn0038209,PANTHER:PTN000590990,UniProtKB:O31539 P BAX inhibitor family protein Bxi1 protein taxon:4896 20241120 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC61.01c str2 involved_in GO:0033214 GO_REF:0000033 IBA PANTHER:PTN001160847,UniProtKB:Q8X1Z7 P vacuolar siderophore-iron transmembrane transporter Str2 SPCC622.20c protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC61.01c str2 involved_in GO:0055085 GO_REF:0000033 IBA PANTHER:PTN001160847,UniProtKB:Q8X1Z7 P vacuolar siderophore-iron transmembrane transporter Str2 SPCC622.20c protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC613.01 SPCC613.01 involved_in GO:0055085 GO_REF:0000033 IBA MGI:MGI:1919425,PANTHER:PTN008600224,TAIR:locus:2015158,UniProtKB:Q8NHS3 P transmembrane transporter SPCC757.14 protein taxon:4896 20240731 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC613.02 SPCC613.02 involved_in GO:0055085 GO_REF:0000033 IBA MGI:MGI:1919425,PANTHER:PTN008600224,TAIR:locus:2015158,UniProtKB:Q8NHS3 P transmembrane transporter protein taxon:4896 20240731 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC63.07 thg1 involved_in GO:0099116 GO_REF:0000033 IBA PANTHER:PTN000977687,SGD:S000003256,UniProtKB:Q9NWX6,dictyBase:DDB_G0291830 P tRNA-His 5'-guanylyltransferase Thg1 protein taxon:4896 20170228 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC757.11c SPCC757.11c involved_in GO:0055085 GO_REF:0000033 IBA MGI:MGI:1919425,PANTHER:PTN008600224,TAIR:locus:2015158,UniProtKB:Q8NHS3 P transmembrane transporter protein taxon:4896 20240731 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC777.15 dus4 involved_in GO:0002943 GO_REF:0000033 IBA PANTHER:PTN000118866,PomBase:SPBC36B7.04,PomBase:SPCC777.15,SGD:S000004397,SGD:S000004545,UniProtKB:Q6P1R4 P tRNA/mRNA dihydrouridine synthase Dus4 protein taxon:4896 20241120 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCC825.04c naa40 involved_in GO:0006338 GO_REF:0000033 IBA PANTHER:PTN000464144,SGD:S000004673,UniProtKB:Q86UY6 P histone N-acetyltransferase Naa40/NatD protein taxon:4896 20241120 GOC `
• ERROR - Violates GO Rule:GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources--`PomBase SPCPB1C11.03 SPCPB1C11.03 involved_in GO:1903712 GO_REF:0000033 IBA PANTHER:PTN000185019,SGD:S000003978 P plasma membrane cysteine transmembrane transporter protein taxon:4896 20170228 GOC `

gorule-0000027

Each identifier in GAF is valid

• total: 42

messages

• WARNING - Invalid identifier:GORULE:0000027: FBgg0000110 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000110 BLOC2 involved_in GO:0016192 GO_REF:0000108 IEA GO:0140312 P BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX-2 protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000129 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000129 APOP involved_in GO:0006915 GO_REF:0000108 IEA GO:0016505 P APOPTOSOME protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000138 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000138 ATAC involved_in GO:0006338 GO_REF:0000108 IEA GO:0004402 P ATAC COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000196 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000196 RETRO located_in GO:0005829 GO_REF:0000108 IEA GO:0042147 C RETROMER protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000285 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000285 TRX-C involved_in GO:0006338 GO_REF:0000108 IEA GO:0042800 P TRX COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000286 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000286 NURF involved_in GO:0006338 GO_REF:0000108 IEA GO:0140658 P NUCLEOSOME REMODELING FACTOR protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000287 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000287 TIP60 involved_in GO:0006338 GO_REF:0000108 IEA GO:0010485 P TIP60 COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000293 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000293 NORC involved_in GO:0006338 GO_REF:0000108 IEA GO:0140658 P NORC COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000296 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000296 COMP involved_in GO:0006338 GO_REF:0000108 IEA GO:0042800 P COMPASS COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000297 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000297 ACF involved_in GO:0006338 GO_REF:0000108 IEA GO:0140658 P ACF COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000298 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000298 DRAF involved_in GO:0006338 GO_REF:0000108 IEA GO:0140680 P dRING-ASSOCIATED FACTORS protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000305 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000305 SAGA involved_in GO:0006338 GO_REF:0000108 IEA GO:0004402 P SAGA COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000312 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000312 TORC involved_in GO:0006338 GO_REF:0000108 IEA GO:0140658 P TORC REMODELING COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000315 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000315 TRR involved_in GO:0006338 GO_REF:0000108 IEA GO:0042800 P TRR COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000316 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000316 TAC1 involved_in GO:0006338 GO_REF:0000108 IEA GO:0042800 P TRITHORAX ACETYLATION COMPLEX 1 protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000471 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000471 GARPI located_in GO:0005829 GO_REF:0000108 IEA GO:0042147 C GOLGI-ASSOCIATED RETROGRADE PROTEIN COMPLEX I protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000472 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000472 GARPII located_in GO:0005829 GO_REF:0000108 IEA GO:0042147 C GOLGI-ASSOCIATED RETROGRADE PROTEIN COMPLEX II protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000592 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000592 CRAC involved_in GO:0070588 GO_REF:0000108 IEA GO:0015279 P CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL SUBUNITS protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000604 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000604 ENOK-C involved_in GO:0006338 GO_REF:0000108 IEA GO:0043994 P ENOK COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0000903 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0000903 PI3K-IA involved_in GO:0036092 GO_REF:0000108 IEA GO:0016303 P CLASS IA PHOSPHATIDYLINOSITOL 3-KINASE COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001066 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001066 CNM involved_in GO:0045944 GO_REF:0000108 IEA GO:0001228 P CSL-NOTCH-MASTERMIND TRANSCRIPTION FACTOR COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001210 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001210 DNAPOLE involved_in GO:0071897 GO_REF:0000108 IEA GO:0003887 P DNA POLYMERASE EPSILON protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001211 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001211 DNAPOLD involved_in GO:0071897 GO_REF:0000108 IEA GO:0003887 P DNA POLYMERASE DELTA protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001216 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001216 DNAPOLG involved_in GO:0071897 GO_REF:0000108 IEA GO:0003887 P DNA POLYMERASE GAMMA protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001614 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001614 MCM2-7 located_in GO:0005634 GO_REF:0000108 IEA GO:0006279 C MCM2-7 COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001639 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001639 P-TEFB involved_in GO:0006357 GO_REF:0000108 IEA GO:0008353 P POSITIVE TRANSCRIPTION ELONGATION FACTOR COMPLEX B protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001639 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001639 P-TEFB involved_in GO:0051726 GO_REF:0000108 IEA GO:0004693 P POSITIVE TRANSCRIPTION ELONGATION FACTOR COMPLEX B protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001728 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001728 DSIF involved_in GO:0006414 GO_REF:0000108 IEA GO:0003746 P DRB SENSITIVITY-INDUCING FACTOR COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001747 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001747 ADAC involved_in GO:0006338 GO_REF:0000108 IEA GO:0004402 P ADA COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001749 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001749 CHAT involved_in GO:0006338 GO_REF:0000108 IEA GO:0010484 P CHAT COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001836 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001836 MCI-U involved_in GO:1902600 GO_REF:0000108 IEA GO:0008137 P MITOCHONDRIAL COMPLEX I protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001836 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001836 MCI-U located_in GO:0005739 GO_REF:0000108 IEA GO:0006120 C MITOCHONDRIAL COMPLEX I protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001837 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001837 MCI-T involved_in GO:1902600 GO_REF:0000108 IEA GO:0008137 P MITOCHONDRIAL COMPLEX I - TESTIS-SPECIFIC VARIANT protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001837 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001837 MCI-T located_in GO:0005739 GO_REF:0000108 IEA GO:0006120 C MITOCHONDRIAL COMPLEX I - TESTIS-SPECIFIC VARIANT protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001840 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001840 MCIV-T involved_in GO:1902600 GO_REF:0000108 IEA GO:0004129 P MITOCHONDRIAL COMPLEX IV - TESTIS-SPECIFIC VARIANT protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001843 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001843 MCIII-T involved_in GO:1902600 GO_REF:0000108 IEA GO:0008121 P MITOCHONDRIAL COMPLEX III - TESTIS-SPECIFIC VARIANT protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001843 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001843 MCIII-T located_in GO:0005739 GO_REF:0000108 IEA GO:0006122 C MITOCHONDRIAL COMPLEX III - TESTIS-SPECIFIC VARIANT protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001847 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001847 MCIV-U involved_in GO:1902600 GO_REF:0000108 IEA GO:0004129 P MITOCHONDRIAL COMPLEX IV protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001850 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001850 MCIII-U involved_in GO:1902600 GO_REF:0000108 IEA GO:0008121 P MITOCHONDRIAL COMPLEX III protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001850 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001850 MCIII-U located_in GO:0005739 GO_REF:0000108 IEA GO:0006122 C MITOCHONDRIAL COMPLEX III protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001866 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001866 CKM involved_in GO:0051726 GO_REF:0000108 IEA GO:0004693 P CKM COMPLEX protein_complex taxon:7227 20250624 GOC `
• WARNING - Invalid identifier:GORULE:0000027: FBgg0001886 does not match any id_syntax patterns for FB in dbxrefs--`FB FBgg0001886 NALCN involved_in GO:0098655 GO_REF:0000108 IEA GO:0005261 P SODIUM LEAK CHANNEL COMPLEX protein_complex taxon:7227 20250624 GOC `