GORULE violations assigned by GOC-OWL

Contents

gorule-0000027 Each identifier in GAF is valid

MESSAGES

gorule-0000027

Each identifier in GAF is valid

• total: 43

messages

• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-081031-9 bicd1a enables GO:0140312 PMID:31541015|ZFIN:ZDB-PUB-190922-3 IC GO:0070840 F bicaudal D homolog 1a si:ch211-136i24.1 protein_coding_gene taxon:7955 20201020 GOC-OWL part_of(GO:0140312)|occurs_in(ZFA:0009247)|part_of(GO:2001017)|part_of(GO:0008045) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b enables GO:0001227 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0000978 F interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0001227)|has_input(ZFIN:ZDB-GENE-980526-164)|part_of(GO:0045650) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-080107-7 il6r acts_upstream_of_or_within GO:0042060 PMID:33196024|ZFIN:ZDB-PUB-201120-141 IC GO:0090023 P interleukin 6 receptor protein_coding_gene taxon:7955 20220803 GOC-OWL part_of(GO:0042060) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-000607-70 hey1 acts_upstream_of_or_within GO:0021984 PMID:27027936|ZFIN:ZDB-PUB-160401-16 IC GO:0001708 P hes-related family bHLH transcription factor with YRPW motif 1 Herp1|id:ibd1292|zgc:110572 protein_coding_gene taxon:7955 20210113 GOC-OWL results_in_specification_of(ZFA:0009155)|part_of(GO:0021984) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-030131-2603 cul1a acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1a wu:fc13a10|zgc:77500 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2114 gmfb acts_upstream_of_or_within GO:0009611 PMID:29655639|ZFIN:ZDB-PUB-180418-43 IC GO:0150103 P glia maturation factor, beta fc25b01|wu:fa97c03|wu:fc25b01|zgc:56451|zgc:86831 protein_coding_gene taxon:7955 20200127 GOC-OWL occurs_in(ZFA:0000079)|part_of(GO:0009611) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2887 cul1b acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1b cul1|wu:fi43h07|wu:fj43a08|zgc:111899|zgc:55483 protein_coding_gene taxon:7955 20181205 GOC-OWL part_of(GO:0030593)|occurs_in(ZFA:0001180) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-060526-275 alkbh4 acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P alkB homolog 4, lysine demthylase si:dkey-261j4.10 protein_coding_gene taxon:7955 20190605 GOC-OWL part_of(GO:1904086)|occurs_in(ZFA:0000309) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-060628-1 tab1 acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P TGF-beta activated kinase 1/MAP3K7 binding protein 1 map3k7ip1|Tab1 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-090312-21 atrn acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P attractin si:dkey-259n11.1 protein_coding_gene taxon:7955 20190605 GOC-OWL occurs_in(ZFA:0000309)|part_of(GO:1904086) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2455 rbm14b acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14b zgc:85696 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-050522-496 rbm14a acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14a im:7053198|wu:fc08a04|zgc:110682 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-070117-2518 nebel acts_upstream_of_or_within GO:2000197 PMID:29632136|ZFIN:ZDB-PUB-180418-2 IC GO:0051209 P nebel neb protein_coding_gene taxon:7955 20190502 GOC-OWL part_of(GO:2000197) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-030131-778 pola2 acts_upstream_of_or_within GO:0031101 PMID:31786062|ZFIN:ZDB-PUB-191202-1 IC GO:0008283 P polymerase (DNA directed), alpha 2 wu:fb48f05|zgc:77841 protein_coding_gene taxon:7955 20210114 GOC-OWL part_of(GO:0031101)|occurs_in(ZFA:0001270) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-060503-592 neu1 acts_upstream_of_or_within GO:0048742 PMID:32686823|ZFIN:ZDB-PUB-200721-3 IC GO:0016997 P neuraminidase 1 si:ch211-222e23.1 protein_coding_gene taxon:7955 20220624 GOC-OWL part_of(GO:0048742) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-030131-4490 epas1a acts_upstream_of_or_within GO:0060218 PMID:29339404|ZFIN:ZDB-PUB-180118-12 IC GO:0007219 P endothelial PAS domain protein 1a hif-2aa|HIF2B|wu:fd10h02 protein_coding_gene taxon:7955 20190221 GOC-OWL part_of(GO:0060218) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2902 ddx39ab acts_upstream_of_or_within GO:0055007 PMID:29636379|ZFIN:ZDB-PUB-180418-14 IC GO:0040029 P DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab ddx39|ddx39b|fc16a02|wu:fc16a02|zgc:55433|zgc:85646 protein_coding_gene taxon:7955 20190806 GOC-OWL has_input(ZFIN:ZDB-GENE-030131-55)|part_of(GO:0055007) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040912-117 lypd6 acts_upstream_of_or_within GO:0009952 PMID:23987510|ZFIN:ZDB-PUB-130905-3 IC GO:0060828 P LY6/PLAUR domain containing 6 zgc:101899 protein_coding_gene taxon:7955 20140217 GOC-OWL part_of(GO:0009952) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-041212-79 zdhhc13 acts_upstream_of_or_within GO:0007501 PMID:24702307|ZFIN:ZDB-PUB-140513-202 IC GO:0030509 P zinc finger DHHC-type palmitoyltransferase 13 fi22e09|wu:fb06e01|wu:fc39g10|wu:fi22e09|zgc:101690 protein_coding_gene taxon:7955 20170518 GOC-OWL part_of(GO:0007501) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-060602-2 pnpo acts_upstream_of_or_within GO:0006536 PMID:31759955|ZFIN:ZDB-PUB-191125-2 IC GO:0004733 P pyridoxamine 5'-phosphate oxidase im:7138360 protein_coding_gene taxon:7955 20221024 GOC-OWL part_of(GO:0006536) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-080204-62 pygo1 acts_upstream_of_or_within GO:0007507 PMID:30366904|ZFIN:ZDB-PUB-181028-1 IC GO:0060828 P pygopus family PHD finger 1 zgc:172214 protein_coding_gene taxon:7955 20200320 GOC-OWL part_of(GO:0007507) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-081031-9 bicd1a acts_upstream_of_or_within GO:0008045 PMID:31541015|ZFIN:ZDB-PUB-190922-3 IC GO:0070840 P bicaudal D homolog 1a si:ch211-136i24.1 protein_coding_gene taxon:7955 20201020 GOC-OWL part_of(GO:0008045)|part_of(GO:0140312)|occurs_in(ZFA:0009247)|part_of(GO:2001017) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-081031-9 bicd1a acts_upstream_of_or_within GO:2001017 PMID:31541015|ZFIN:ZDB-PUB-190922-3 IC GO:0070840 P bicaudal D homolog 1a si:ch211-136i24.1 protein_coding_gene taxon:7955 20201020 GOC-OWL part_of(GO:0140312)|part_of(GO:0008045)|occurs_in(ZFA:0009247)|part_of(GO:2001017) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-090313-135 bcl9 acts_upstream_of_or_within GO:0007507 PMID:30366904|ZFIN:ZDB-PUB-181028-1 IC GO:0060828 P BCL9 transcription coactivator si:ch73-15j19.1 protein_coding_gene taxon:7955 20200320 GOC-OWL part_of(GO:0007507) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-120320-3 nfe2l2b acts_upstream_of_or_within GO:0006979 PMID:22174413|ZFIN:ZDB-PUB-120105-51 IC GO:0000122 P nfe2 like bZIP transcription factor 2b Nrf2b|si:dkey-3d18.4 protein_coding_gene taxon:7955 20120320 GOC-OWL part_of(GO:0006979) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-990415-22 dharma acts_upstream_of_or_within GO:0003146 PMID:9334285|ZFIN:ZDB-PUB-971203-9 IC GO:0030510 P dharma boz|bozozok|dha|momo|nieuwkoid|nwk protein_coding_gene taxon:7955 20100420 GOC-OWL part_of(GO:0003146) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-990415-44 cyp26a1 acts_upstream_of_or_within GO:0001756 PMID:23975936|ZFIN:ZDB-PUB-130904-42 IC GO:0048384 P cytochrome P450, family 26, subfamily A, polypeptide 1 cb24|etID42255.12|gir|giraffe|id:ibd5061|P450RAI|wu:fb81e05 protein_coding_gene taxon:7955 20140221 GOC-OWL part_of(GO:0001756) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-990615-5 tbx16 acts_upstream_of_or_within GO:0003146 PMID:9334285|ZFIN:ZDB-PUB-971203-9 IC GO:0030510 P T-box transcription factor 16 cb103|id:ibd2185|spadetail|spt|spt-1|wu:fa17g07|ZF-SPT|zgc:109817 protein_coding_gene taxon:7955 20100420 GOC-OWL part_of(GO:0003146) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-MIRNAG-050103-6 dre-mir-19a acts_upstream_of_or_within GO:0001756 PMID:23975936|ZFIN:ZDB-PUB-130904-42 IC GO:0048384 P microRNA 19a miRNA taxon:7955 20140221 GOC-OWL part_of(GO:0001756) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-MIRNAG-081208-23 mir19c acts_upstream_of_or_within GO:0001756 PMID:23975936|ZFIN:ZDB-PUB-130904-42 IC GO:0048384 P microRNA 19c miRNA taxon:7955 20140221 GOC-OWL part_of(GO:0001756) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-MIRNAG-081208-24 mir19d acts_upstream_of_or_within GO:0001756 PMID:23975936|ZFIN:ZDB-PUB-130904-42 IC GO:0048384 P microRNA 19d miRNA taxon:7955 20140221 GOC-OWL part_of(GO:0001756) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-MIRNAG-081211-4 mir125b-2 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-2 miRNA taxon:7955 20200813 GOC-OWL has_input(ZFIN:ZDB-GENE-990415-270)|part_of(GO:0035195) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2669 nudt9 acts_upstream_of_or_within GO:1902159 PMID:31844070|ZFIN:ZDB-PUB-191218-5 IC GO:0005515 P nudix (nucleoside diphosphate linked moiety X)-type motif 9 fu33g07|sb:cb392|wu:fj16b09|wu:fu33g07|zgc:63924 protein_coding_gene taxon:7955 20210519 GOC-OWL has_input(ZFIN:ZDB-GENE-061214-4)|part_of(GO:1902159) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-1379 clcnk acts_upstream_of_or_within GO:0055064 PMID:31177533|ZFIN:ZDB-PUB-190610-4 IC GO:0015108 P chloride channel K CIC-K|clck|zgc:64141 protein_coding_gene taxon:7955 20200505 GOC-OWL part_of(GO:0055064) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b acts_upstream_of_or_within GO:0045650 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0000978 P interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0045650)|part_of(GO:0001227)|has_input(ZFIN:ZDB-GENE-980526-164) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040724-208 tgfa acts_upstream_of_or_within GO:0045187 PMID:31763451|ZFIN:ZDB-PUB-191126-6 IC GO:0140313 P transforming growth factor, alpha si:ch211-10e8.7 protein_coding_gene taxon:7955 20220420 GOC-OWL part_of(GO:0045187) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-090821-1 lrp6 acts_upstream_of_or_within GO:0009950 PMID:23987510|ZFIN:ZDB-PUB-130905-3 IC GO:0060070 P low density lipoprotein receptor-related protein 6 protein_coding_gene taxon:7955 20201221 GOC-OWL part_of(GO:0009950) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-040426-997 ercc2 located_in GO:0005730 PMID:36065184|ZFIN:ZDB-PUB-220907-37 IC GO:0061031 C excision repair cross-complementation group 2 XPD|zgc:56365 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005730) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-050522-54 banp located_in GO:0005634 PMID:35942692|ZFIN:ZDB-PUB-220810-2 IC GO:0010564 C BTG3 associated nuclear protein zgc:111954 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-070702-2 wrn located_in GO:0005634 PMID:36114168|ZFIN:ZDB-PUB-220920-33 IC GO:0098868 C WRN RecQ like helicase protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-090313-92 snphb located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin b si:ch211-224l10.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-081104-227 snpha located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin a si:ch211-37p17.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295) `
• WARNING - Invalid identifier:GORULE:0000027: GOC-OWL is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 located_in GO:0060293 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0070925 C tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL occurs_in(GO:0060293) `