GORULE violations assigned by FlyBase


Contents

gorule-0000008 GORULE:0000008: No annotations should be made to uninformatively high level terms

gorule-0000013 GORULE:0000013: Taxon-appropriate annotation check

gorule-0000016 GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column

gorule-0000020 Violates GORULE:0000020

gorule-0000027 GORULE:0000027: contains non letter, non number character, or spaces

gorule-0000046 GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms

gorule-0000051 GORULE:0000051: Some GO terms require a value in the Annotation Extension field

gorule-0000061 GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025



MESSAGES

gorule-0000008

GORULE:0000008: No annotations should be made to uninformatively high level terms

messages

gorule-0000013

GORULE:0000013: Taxon-appropriate annotation check

messages

gorule-0000016

GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column

messages

gorule-0000020

Violates GORULE:0000020

messages

gorule-0000027

GORULE:0000027: contains non letter, non number character, or spaces

messages

gorule-0000046

GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms

messages

gorule-0000051

GORULE:0000051: Some GO terms require a value in the Annotation Extension field

messages

gorule-0000061

GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025

messages