GORULE violations assigned by CAFA

Contents

gorule-0000005 IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

gorule-0000008 No annotations should be made to uninformative high level terms

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

gorule-0000027 Each identifier in GAF is valid

gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

gorule-0000061 Allowed gene product to term relations (gp2term)

MESSAGES

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

• total: 3

messages

• WARNING - Violates GO Rule:GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'--`MGI MGI:97750 Ppib enables GO:0005515 GO_REF:0000024 ISS UniProtKB:P24367 F Peptidyl-prolyl cis-trans isomerase B protein taxon:10090 20180925 CAFA has_input(UniProtKB:Q9CYD3),has_input(UniProtKB:Q3V1T4) `
• WARNING - Violates GO Rule:GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'--`MGI MGI:1891221 Crtap enables GO:0005515 GO_REF:0000024 ISS UniProtKB:Q90830 F Cartilage-associated protein protein taxon:10090 20180925 CAFA has_input(UniProtKB:Q3V1T4),has_input(UniProtKB:P24369) `
• WARNING - Violates GO Rule:GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'--`UniProtKB P23284 PPIB enables GO:0005515 GO_REF:0000024 ISS UniProtKB:P24367 F Peptidyl-prolyl cis-trans isomerase B PPIB|CYPB protein taxon:9606 20180925 CAFA has_input(UniProtKB:O75718),has_input(UniProtKB:Q32P28) UniProtKB:P23284 `

gorule-0000008

No annotations should be made to uninformative high level terms

• total: 10

messages

• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`FB FBgn0000100 RpLP0 involved_in GO:0090304 FB:FBrf0090870|PMID:8932386 IDA P Ribosomal protein LP0 60S ribosomal protein P0|ACIDIC RIBOSOMAL PROTEIN LP0|AP3|Ap3|Ape|Apurinic endonuclease 3|CG7490|L10|LP0|P0|P35|PO|RLA0|RPL P0|Ribosomal protein P0|RpP0|RpPO|Rplp0|l(3)0154|l(3)01544|p0|ribosomal protein P0 protein taxon:7227 20170123 CAFA `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB O75496 GMNN involved_in GO:0035563 PMID:11125146 IDA P Geminin GMNN protein taxon:9606 20160725 CAFA has_input(UniProtKB:Q91628) UniProtKB:O75496 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P01579 IFNG involved_in GO:1904798 PMID:23629966 IDA P Interferon gamma IFNG protein taxon:9606 20161108 CAFA UniProtKB:P01579 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P09960 LTA4H involved_in GO:0019538 PMID:11675384 IMP P Leukotriene A-4 hydrolase LTA4H|LTA4 protein taxon:9606 20160602 CAFA UniProtKB:P09960 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P49768 PSEN1 involved_in GO:1904797 PMID:10508860 IMP P Presenilin-1 PSEN1|AD3|PS1|PSNL1 protein taxon:9606 20170124 CAFA UniProtKB:P49768 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P55854 SUMO3 involved_in GO:0043392 PMID:16626738 IDA P Small ubiquitin-related modifier 3 SUMO3|SMT3A|SMT3H1 protein taxon:9606 20190910 CAFA has_input(UniProtKB:Q13569) UniProtKB:P55854 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P62913 RPL11 involved_in GO:0032092 PMID:18560357 IMP P Large ribosomal subunit protein uL5 RPL11 protein taxon:9606 20170124 CAFA UniProtKB:P62913 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB P63165 SUMO1 involved_in GO:0043392 PMID:16626738 IDA P Small ubiquitin-related modifier 1 SUMO1|SMT3C|SMT3H3|UBL1|OK/SW-cl.43 protein taxon:9606 20190910 CAFA has_input(UniProtKB:Q13569) UniProtKB:P63165 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q09161 NCBP1 involved_in GO:1905216 PMID:23793891 IMP P Nuclear cap-binding protein subunit 1 NCBP1|CBP80|NCBP protein taxon:9606 20170111 CAFA UniProtKB:Q09161 `
• WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB Q9H211 CDT1 involved_in GO:0035563 PMID:11125146 IDA P DNA replication factor Cdt1 CDT1 protein taxon:9606 20160725 CAFA has_input(UniProtKB:P30664),has_input(UniProtKB:Q5XK83),has_input(UniProtKB:Q91628) UniProtKB:Q9H211 `

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 18

messages

• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P62328 TMSB4X involved_in GO:0042989 PMID:1447300 IDA P Thymosin beta-4 TMSB4X|TB4X|THYB4|TMSB4 protein taxon:9606 20160615 CAFA occurs_in(CL:0000094) UniProtKB:P62328 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P62328 TMSB4X involved_in GO:0042989 PMID:1999398 IDA P Thymosin beta-4 TMSB4X|TB4X|THYB4|TMSB4 protein taxon:9606 20160613 CAFA UniProtKB:P62328 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P62326 TMSB4 involved_in GO:0042989 PMID:1447300 IDA P Thymosin beta-4 TMSB4|THYB4 protein taxon:9913 20160615 CAFA UniProtKB:P62326 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`MGI MGI:1924587 Akr1c21 enables GO:0072555 PMID:20124700 IMP F Aldo-keto reductase family 1 member C21 protein taxon:10090 20161125 CAFA `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P20810 CAST involved_in GO:0097340 PMID:2407243 IMP P Calpastatin CAST protein taxon:9606 20160921 CAFA UniProtKB:P20810 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`MGI MGI:97798 Ptgs2 involved_in GO:2000117 PMID:21716255 IMP P Prostaglandin G/H synthase 2 protein taxon:10090 20161108 CAFA `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P02788 LTF involved_in GO:2000117 PMID:12788072 IDA P Lactotransferrin LTF|GIG12|LF protein taxon:9606 20161206 CAFA UniProtKB:P02788 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P05814 CSN2 involved_in GO:2000117 PMID:12788072 IDA P Beta-casein CSN2|CASB protein taxon:9606 20161206 CAFA UniProtKB:P05814 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P02666 CSN2 involved_in GO:2000117 PMID:12788072 IDA P Beta-casein CSN2 protein taxon:9913 20161206 CAFA UniProtKB:P02666 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P24627 LTF involved_in GO:2000117 PMID:12788072 IDA P Lactotransferrin LTF protein taxon:9913 20161206 CAFA UniProtKB:P24627 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB Q9XT82 PTGER2 involved_in GO:2000117 PMID:21716255 IMP P Prostaglandin E2 receptor EP2 subtype PTGER2 protein taxon:9615 20161108 CAFA UniProtKB:Q9XT82 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB O43464 HTRA2 involved_in GO:2001056 PMID:11967569 IMP P Serine protease HTRA2, mitochondrial HTRA2|OMI|PRSS25 protein taxon:9606 20161215 CAFA UniProtKB:O43464 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`UniProtKB P25445 FAS involved_in GO:2001056 PMID:11096076 IMP P Tumor necrosis factor receptor superfamily member 6 FAS|APT1|FAS1|TNFRSF6 protein taxon:9606 20170124 CAFA UniProtKB:P25445 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:106022 Rpl26 involved_in GO:0006977 PMID:16213212 IDA P Large ribosomal subunit protein uL24 protein taxon:10090 20170125 CAFA `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P04637 TP53 involved_in GO:0006977 PMID:16213212 IMP P Cellular tumor antigen p53 TP53|P53 protein taxon:9606 20170125 CAFA UniProtKB:P04637 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P61254 RPL26 involved_in GO:0006977 PMID:16213212 IMP P Large ribosomal subunit protein uL24 RPL26 protein taxon:9606 20170125 CAFA UniProtKB:P61254 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P04637 TP53 involved_in GO:0006978 PMID:16213212 IDA P Cellular tumor antigen p53 TP53|P53 protein taxon:9606 20170125 CAFA UniProtKB:P04637 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB P61254 RPL26 involved_in GO:1902164 PMID:16213212 IMP P Large ribosomal subunit protein uL24 RPL26 protein taxon:9606 20170125 CAFA UniProtKB:P61254 `

gorule-0000027

Each identifier in GAF is valid

• total: 2

messages

• WARNING - Invalid identifier:GORULE:0000027: 88026 does not match any id_syntax patterns for MGI in dbxrefs--`MGI MGI:88026 Ank3 located_in GO:0043194 PMID:27356871 IDA C Ankyrin-3 protein taxon:10090 20161102 CAFA part_of(UBERON:0008930) `
• WARNING - Invalid identifier:GORULE:0000027: 12793003 does not match any id_syntax patterns for RGD in dbxrefs--`RGD 1305321 Mars1 part_of GO:0017101 PMID:19524539|RGD:12793003 IDA C methionyl-tRNA synthetase 1 gene taxon:10116 20170119 CAFA `

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

• total: 53

messages

• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:98181 Rrm2 enables GO:0042803 PMID:8876648 IDA F Ribonucleoside-diphosphate reductase subunit M2 protein taxon:10090 20161103 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`MGI MGI:88005 Amelx enables GO:0042803 PMID:19086270 IDA F Amelogenin, X isoform protein taxon:10090 20161125 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P05704 trg enables GO:0042803 PMID:15916610 IMP F Methyl-accepting chemotaxis protein III trg|JW1417|b1421 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P06709 birA enables GO:0042803 PMID:11124029 IMP F Bifunctional ligase/repressor BirA birA|bioR|dhbB|JW3941|b3973 protein taxon:83333 20161020 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P07017 tar enables GO:0042803 PMID:15916610 IMP F Methyl-accepting chemotaxis protein II tar|cheM|JW1875|b1886 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P09372 grpE enables GO:0042803 PMID:9103205 IDA F Protein GrpE grpE|JW2594|b2614 protein taxon:83333 20160926 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0A6R3 fis enables GO:0042803 PMID:11183780 IMP F DNA-binding protein Fis fis|JW3229|b3261 protein taxon:83333 20161028 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0A6R3 fis enables GO:0042803 PMID:1619650 IDA F DNA-binding protein Fis fis|JW3229|b3261 protein taxon:83333 20161028 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0A6R3 fis enables GO:0042803 PMID:1946369 IMP F DNA-binding protein Fis fis|JW3229|b3261 protein taxon:83333 20161028 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0A6R3 fis enables GO:0042803 PMID:9362499 IMP F DNA-binding protein Fis fis|JW3229|b3261 protein taxon:83333 20161028 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0A7K2 rplL enables GO:0042803 PMID:10747797 IDA F Large ribosomal subunit protein bL12 rplL|JW3949|b3986 protein taxon:83333 20160630 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AE70 mazF enables GO:0042803 PMID:12718874 IDA F Endoribonuclease toxin MazF mazF|chpA|chpAK|JW2753|b2782 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AE72 mazE enables GO:0042803 PMID:12718874 IDA F Antitoxin MazE mazE|chpAI|chpR|JW2754|b2783 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AE72 mazE enables GO:0042803 PMID:12743116 IDA F Antitoxin MazE mazE|chpAI|chpR|JW2754|b2783 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AE72 mazE enables GO:0042803 PMID:15735309 IDA F Antitoxin MazE mazE|chpAI|chpR|JW2754|b2783 protein taxon:83333 20161017 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AFG8 aceE enables GO:0042803 PMID:11955070 IDA F Pyruvate dehydrogenase E1 component aceE|JW0110|b0114 protein taxon:83333 20161031 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AFI7 pdxH enables GO:0042803 PMID:15858270 IDA F Pyridoxine/pyridoxamine 5'-phosphate oxidase pdxH|JW1630|b1638 protein taxon:83333 20160927 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P0AFZ3 sspB enables GO:0042803 PMID:14536075 IMP F Stringent starvation protein B sspB|JW3197|b3228 protein taxon:83333 20160930 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 1359514 Scly enables GO:0042803 PMID:20164179|RGD:12793035 IDA F selenocysteine lyase gene taxon:10116 20161117 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 2553 Eno1 enables GO:0042803 PMID:7964722|RGD:12792993 IDA F enolase 1 gene taxon:10116 20160720 CAFA occurs_in(GO:0005886) `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 2677 Gdnf enables GO:0042803 PMID:9187648|RGD:12793052 IDA F glial cell derived neurotrophic factor gene taxon:10116 20160913 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 2754 Gsta2 enables GO:0042803 PMID:15152091|RGD:12793030 IDA F glutathione S-transferase alpha 2 gene taxon:10116 20161020 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 3222 Ocm enables GO:0042803 PMID:2231727|RGD:12793042 IDA F oncomodulin gene taxon:10116 20161020 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`RGD 3222 Ocm enables GO:0042803 PMID:8487302|RGD:12793021 IDA F oncomodulin gene taxon:10116 20161020 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0000024 Ace enables GO:0042803 FB:FBrf0128486|PMID:10892800 IDA F Acetylcholine esterase ACE|ACHE|AChE|AcChE|Acetylcholinesterase|AchE|CG17907|CHE|ChE|DmAChE|Dm_ace|ace|ace-2|acetyl choline esterase|acetylcholine esterase|acetylcholinesterase|ache|cholinesterase|dAChE|dmAChE|l(3)26|l(3)87Ed protein taxon:7227 20161019 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0024432 Dlc90F enables GO:0042803 FB:FBrf0215103|PMID:19759397 IDA F Dynein light chain 90F CG12363|Dynein|TcTex-1|Tctex|Tctex-1|Tctex1|bs35g12.y1|dlc90F|dtctex-1|dynein light chain; tctex-1|l(3)04091|tctex|tctex-1 protein taxon:7227 20161115 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0000546 EcR enables GO:0042803 FB:FBrf0218420|PMID:22628309 IMP F Ecdysone receptor CG1765|CG8347|DEcR|Dhr23|DmEcR|ECR|ECR-C|EcR-A|EcR-B|EcR-B1|EcR1b|EcRA|EcRB|EcRB-1|EcRB1|EcRC|EcdR|Ecdyson Receptor 1b|Ecdysone Receptor|Ecdysone-R|Ecr|Ecr1B|EcrB1|NR1H1|USP|Usp|anon-WO0229075.1|dECR|dmEcR|ecdysone receptor|ecdysone receptor complex|ecdysone-Receptor|ecdysteroid receptor|ecdysterone receptor|ecr|lie|long island expressway|male sterile(2)42A|ms(2)06410|ms(2)42A|snaggletooth|snt protein taxon:7227 20161115 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0011760 ctp enables GO:0042803 FB:FBrf0187168|PMID:15581372 IMP F cut up 8kd dynein light chain|CG6998|Cdlc1|Ctp|Cut up|Cytoplasmic dynein|Cytoplasmic dynein 8kD light chain|Cytoplasmic dynein light chain 1|DLC8|DdlC1|Ddlc-1|Ddlc1|Dlc|Dynein light chain|Dynein light chain 1|LC8|anon-WO03040301.128|cytoplasmic dynein|cytoplasmic dynein light chain 1|dDYNLL1|ddlc1|dlc|dynein|dynein light chain|dynein light chain 1|dynein light chain 8|dynein light chain LC8|dynein light-chain|dynein light-chain 1|l(1)G0153|l(1)G0204|l(1)G0207|l(1)G0244|l(1)G0248|l(1)G0338|l(1)G0371|l(1)G0387|l(1)G0432|l(1)G0445|lincRNA.S8635 protein taxon:7227 20161115 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0011760 ctp enables GO:0042803 FB:FBrf0215103|PMID:19759397 IDA F cut up 8kd dynein light chain|CG6998|Cdlc1|Ctp|Cut up|Cytoplasmic dynein|Cytoplasmic dynein 8kD light chain|Cytoplasmic dynein light chain 1|DLC8|DdlC1|Ddlc-1|Ddlc1|Dlc|Dynein light chain|Dynein light chain 1|LC8|anon-WO03040301.128|cytoplasmic dynein|cytoplasmic dynein light chain 1|dDYNLL1|ddlc1|dlc|dynein|dynein light chain|dynein light chain 1|dynein light chain 8|dynein light chain LC8|dynein light-chain|dynein light-chain 1|l(1)G0153|l(1)G0204|l(1)G0207|l(1)G0244|l(1)G0248|l(1)G0338|l(1)G0371|l(1)G0387|l(1)G0432|l(1)G0445|lincRNA.S8635 protein taxon:7227 20161115 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`FB FBgn0011760 ctp enables GO:0042803 FB:FBrf0254970|PMID:15051340 IMP F cut up 8kd dynein light chain|CG6998|Cdlc1|Ctp|Cut up|Cytoplasmic dynein|Cytoplasmic dynein 8kD light chain|Cytoplasmic dynein light chain 1|DLC8|DdlC1|Ddlc-1|Ddlc1|Dlc|Dynein light chain|Dynein light chain 1|LC8|anon-WO03040301.128|cytoplasmic dynein|cytoplasmic dynein light chain 1|dDYNLL1|ddlc1|dlc|dynein|dynein light chain|dynein light chain 1|dynein light chain 8|dynein light chain LC8|dynein light-chain|dynein light-chain 1|l(1)G0153|l(1)G0204|l(1)G0207|l(1)G0244|l(1)G0248|l(1)G0338|l(1)G0371|l(1)G0387|l(1)G0432|l(1)G0445|lincRNA.S8635 protein taxon:7227 20161115 CAFA `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P06733 ENO1 enables GO:0042803 PMID:3529090 IDA F Alpha-enolase ENO1|ENO1L1|MBPB1|MPB1 protein taxon:9606 20160718 CAFA UniProtKB:P06733 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P07602 PSAP enables GO:0042803 PMID:18462685 IDA F Prosaposin PSAP|GLBA|SAP1 protein taxon:9606 20161018 CAFA UniProtKB:P07602 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P08238 HSP90AB1 enables GO:0042803 PMID:10811660 IDA F Heat shock protein HSP 90-beta HSP90AB1|HSP90B|HSPC2|HSPC3|HSPCB protein taxon:9606 20170110 CAFA UniProtKB:P08238 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P10912 GHR enables GO:0042803 PMID:8943276 IDA F Growth hormone receptor GHR protein taxon:9606 20160817 CAFA UniProtKB:P10912 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P15309 ACP3 enables GO:0042803 PMID:10639192 IDA F Prostatic acid phosphatase ACP3|ACPP protein taxon:9606 20170112 CAFA UniProtKB:P15309 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P17342 NPR3 enables GO:0042803 PMID:16870210 IDA F Atrial natriuretic peptide receptor 3 NPR3|ANPRC|C5orf23|NPRC protein taxon:9606 20161014 CAFA UniProtKB:P17342 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P19971 TYMP enables GO:0042803 PMID:1590793 IDA F Thymidine phosphorylase TYMP|ECGF1 protein taxon:9606 20160722 CAFA UniProtKB:P19971 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P23381 WARS1 enables GO:0042803 PMID:22504299 IDA F Tryptophan--tRNA ligase, cytoplasmic WARS1|IFI53|WARS|WRS protein taxon:9606 20170124 CAFA UniProtKB:P23381 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P24522 GADD45A enables GO:0042803 PMID:20460379 IDA F Growth arrest and DNA damage-inducible protein GADD45 alpha GADD45A|DDIT1|GADD45 protein taxon:9606 20161124 CAFA UniProtKB:P24522 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P32455 GBP1 enables GO:0042803 PMID:10676968 IDA F Guanylate-binding protein 1 GBP1 protein taxon:9606 20161215 CAFA UniProtKB:P32455 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P35638 DDIT3 enables GO:0042803 PMID:18534616 IDA F DNA damage-inducible transcript 3 protein DDIT3|CHOP|CHOP10|GADD153 protein taxon:9606 20170113 CAFA UniProtKB:P35638 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P78356 PIP4K2B enables GO:0042803 PMID:9753329 IDA F Phosphatidylinositol 5-phosphate 4-kinase type-2 beta PIP4K2B|PIP5K2B protein taxon:9606 20160816 CAFA UniProtKB:P78356 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q04206 RELA enables GO:0042803 PMID:18045535 IDA F Transcription factor p65 RELA|NFKB3 protein taxon:9606 20160512 CAFA UniProtKB:Q04206 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q6PI77 GPRASP3 enables GO:0042803 GO_REF:0000024 ISS UniProtKB:Q6PB60 F G protein-coupled receptor associated sorting protein 3 GPRASP3|BHLHB9|KIAA1701 protein taxon:9606 20131008 CAFA UniProtKB:Q6PI77 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q92886 NEUROG1 enables GO:0042803 PMID:20102160 IDA F Neurogenin-1 NEUROG1|BHLHA6|NEUROD3|NGN|NGN1 protein taxon:9606 20161208 CAFA UniProtKB:Q92886 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9H2S9 IKZF4 involved_in GO:0051260 PMID:15491138 IMP P Zinc finger protein Eos IKZF4|KIAA1782|ZNFN1A4 protein taxon:9606 20170111 CAFA UniProtKB:Q9H2S9 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9NVS9 PNPO enables GO:0042803 PMID:12824491 IDA F Pyridoxine-5'-phosphate oxidase PNPO protein taxon:9606 20161020 CAFA UniProtKB:Q9NVS9 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9Y3M2 CBY1 enables GO:0042803 PMID:21182262 IDA F Protein chibby homolog 1 CBY1|ARB1|C22orf2|CBY|PGEA1|HRIHFB2025 protein taxon:9606 20161110 CAFA UniProtKB:Q9Y3M2 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q9Y3M2 CBY1 involved_in GO:0051289 PMID:21182262 IDA P Protein chibby homolog 1 CBY1|ARB1|C22orf2|CBY|PGEA1|HRIHFB2025 protein taxon:9606 20161110 CAFA UniProtKB:Q9Y3M2 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P21758 MSR1 involved_in GO:0070207 PMID:11785981 IMP P Macrophage scavenger receptor types I and II MSR1 protein taxon:9913 20161011 CAFA UniProtKB:P21758 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P21793 DCN enables GO:0042803 PMID:15501918 IDA F Decorin DCN protein taxon:9913 20161104 CAFA UniProtKB:P21793 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB P80457 XDH enables GO:0042803 PMID:11005854 IDA F Xanthine dehydrogenase/oxidase XDH protein taxon:9913 20161101 CAFA UniProtKB:P80457 `
• WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`UniProtKB Q28181 CNGB1 enables GO:0042803 PMID:16280326 IDA F Cyclic nucleotide-gated channel beta-1 CNGB1|CNCG4 protein taxon:9913 20161101 CAFA UniProtKB:Q28181 `

gorule-0000061

Allowed gene product to term relations (gp2term)

• total: 1

messages

• WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050--`FB FBgn0031835 Dpp10 colocalizes_with GO:0008076 FB:FBrf0250772|PMID:27198182 IPI UniProtKB:Q62897 C Dipeptidyl peptidase 10 CG11319|DPP10 protein taxon:7227 20171020 CAFA `