The gene association files ingested from GO Consortium members are shown in the table below. Files are in the GO annotation file format and are compressed using the UNIX gzip utility. Please see the upstream resource information for further details on the annotation set. Any errors or omissions in annotations should be reported by writing to the GO Helpdesk.
These files are taxon-specific and reflect the work of specific projects, primarily the model organisms database groups, to provide comprehensive, non-redundant annotation files for their organism. All the files in this table have been filtered using the annotation file QC pipeline. A major component to the filtering is the requirement that particular taxon IDs can only be included within the association files provided by specific projects; the current list of authoritative groups and major model organisms can be found below.
| Species/Database | Entity type | Annotations | File | 
|---|---|---|---|
| Species/Database | Entity type | Annotations | File | 
| Dictyostelium discoideum dictyBase (dictyBase) | n/a | 75952 | dictybase.gaf (gzip) | 
| Mus musculus Mouse Genome Informatics (mgi) | n/a | 744389 | mgi.gaf (gzip) | 
| Solanaceae Sol Genomics Network (sgn) | gene | 1354 | sgn.gaf (gzip) | 
| Sus scrofa EBI Gene Ontology Annotation Database (goa) | all | 305475 | goa_pig.gaf (gzip) | 
| Danio rerio Zebrafish Information Network (zfin) | n/a | 250491 | zfin.gaf (gzip) | 
| Escherichia coli Encyclopedia of E. coli metabolism (ecocyc) | n/a | 62736 | ecocyc.gaf (gzip) | 
| Rattus norvegicus Rat Genome Database (rgd) | n/a | 590055 | rgd.gaf (gzip) | 
| Saccharomyces cerevisiae Saccharomyces Genome Database (sgd) | n/a | 169668 | sgd.gaf (gzip) | 
| Schizosaccharomyces pombe PomBase (pombase) | n/a | 90710 | pombase.gaf (gzip) | 
| Plasmodium falciparum GeneDB (genedb) | n/a | 10449 | genedb_pfalciparum.gaf (gzip) | 
| Pseudomonas aeruginosa Pseudomonas Genome Project (pseudocap) | n/a | 30006 | pseudocap.gaf (gzip) | 
| Drosophila melanogaster FlyBase (fb) | n/a | 186975 | fb.gaf (gzip) | 
| Homo sapiens EBI Gene Ontology Annotation Database (goa) | all | 972445 | goa_human.gaf (gzip) | 
| Caenorhabditis elegans WormBase database of nematode biology (wb) | n/a | 125157 | wb.gaf (gzip) | 
| Bos taurus EBI Gene Ontology Annotation Database (goa) | all | 299392 | goa_cow.gaf (gzip) | 
| Leishmania major GeneDB (genedb) | n/a | 9843 | genedb_lmajor.gaf (gzip) | 
| Xenopus Xenbase (tropicalis) (xenbase) | n/a | 333941 | xenbase.gaf (gzip) | 
| Schizosaccharomyces japonicus JaponicusDB (japonicusdb) | n/a | 49315 | japonicusdb.gaf (gzip) | 
| Multi-species Reactome - a curated knowledgebase of biological pathways (reactome) | n/a | 105521 | reactome.gaf (gzip) | 
| Multi-species Candida Genome Database (cgd) | n/a | 360836 | cgd.gaf (gzip) | 
| Gallus gallus EBI Gene Ontology Annotation Database (goa) | all | 296505 | goa_chicken.gaf (gzip) | 
| Canis lupus familiaris EBI Gene Ontology Annotation Database (goa) | all | 264950 | goa_dog.gaf (gzip) | 
| Trypanosoma brucei GeneDB (genedb) | n/a | 20191 | genedb_tbrucei.gaf (gzip) | 
| Arabidopsis thaliana The Arabidopsis Information Resource (tair) | n/a | 227211 | tair.gaf (gzip) | 
	    
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